MTMR4

General Information

Gene Name       : MTMR4
Gene ID             : ENSG00000108389.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MTMR4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MTMR4ENSG00000108389.932.8436.8734.86ENCSR000AEF
HepG2MTMR4ENSG00000108389.930.4930.6430.56ENCSR985KAT
K562MTMR4ENSG00000108389.918.5619.7819.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MTMR4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MTMR4 RNA is bound by 22 proteins.  







eCLIP assay for MTMR4 is not avaliable on ENCORE database.





22 proteins are bound to MTMR4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr175658547656585554-3'-UTR,CDS,intron-Distal,intron-Proximal4.3649912.48497HepG2PRPF8
chr175656812456568205-3'-UTR,intron-Distal4.8421311.65463K562LIN28B
chr175658975056589798-3'-UTR,CDS,intron-Distal,intron-Proximal4.7128511.68917HepG2PPIG
chr175656802256568082-3'-UTR,intron-Distal3.145035.99166K562UPF1
chr175656799156568033-3'-UTR,intron-Distal3.181424.79181K562FAM120A
chr175656757556567634-3'-UTR,intron-Distal4.7903116.69583K562UPF1
chr175658882656588872-3'-UTR,CDS,intron-Distal4.4526814.23489HepG2PPIG
chr175656764256567758-3'-UTR,intron-Distal6.2784956.19381K562UPF1
chr175656708356567198-3'-UTR,intron-Distal3.360464.21448HepG2UPF1
chr175656801356568071-3'-UTR,intron-Distal4.188833.19379HepG2AKAP1
chr175656767656567764-3'-UTR,intron-Distal5.5235310.05440HepG2UPF1
chr175656803056568081-3'-UTR,intron-Distal3.106563.20756HepG2UPF1
chr175658873156588798-3'-UTR,CDS,intron-Distal,intron-Proximal3.648069.56004HepG2PRPF8
chr175658547756585540-3'-UTR,CDS,intron-Distal,intron-Proximal3.419623.88924K562PRPF8
chr175656813456568202-3'-UTR,intron-Distal3.772764.08943HepG2LIN28B
chr175656872456568779-3'-UTR,intron-Distal,intron-Proximal4.171203.64119HepG2UPF1
chr175656706056567174-3'-UTR,intron-Distal4.232274.66439HepG2AKAP1
chr175658883056588874-3'-UTR,CDS,intron-Distal,intron-Proximal4.741285.64460HepG2GRWD1
chr175658552456585631-3'-UTR,CDS,intron-Distal,intron-Proximal4.1606810.72269HepG2PPIG
chr175656709056567156-3'-UTR,intron-Distal4.3627618.54606K562UPF1
chr175658580856585872-3'-UTR,CDS,intron-Distal,intron-Proximal3.844286.20417HepG2BUD13
chr175658878156588826-3'-UTR,CDS,intron-Distal,intron-Proximal4.040879.27186HepG2PPIG
chr175658578856585842-3'-UTR,CDS,intron-Distal,intron-Proximal4.119066.23016HepG2PRPF8
chr175658876356588830-3'-UTR,CDS,intron-Distal,intron-Proximal3.877615.80880HepG2GRWD1
chr175656813156568219-3'-UTR,intron-Distal3.207153.29348K562YBX3
chr175658558456585631-3'-UTR,CDS,intron-Distal,intron-Proximal3.881553.01428K562UCHL5
chr175656833456568408-3'-UTR,intron-Distal3.7844010.02205K562UPF1
chr175658587956585925-3'-UTR,CDS,intron-Distal3.220614.30677K562YBX3
chr175659021556590273-5'-UTR,CDS,intron-Distal3.600897.64107HepG2PPIG
chr175659027356590303-5'-UTR,CDS,intron-Distal,intron-Proximal3.582254.77136HepG2PPIG
chr175659178856591954-5'-UTR,intron-Distal4.4822220.87189HepG2DDX3X
chr175659022456590298-5'-UTR,CDS,intron-Distal3.127683.39477K562BUD13
chr175659188156591956-5'-UTR,intron-Distal3.207423.52645HepG2NCBP2
chr175659515356595181-5'-UTR,intron-Distal3.133025.84601HepG2PRPF8
chr175659028756590372-5'-UTR,CDS,intron-Distal,intron-Proximal3.528433.67894HepG2AQR
chr175658209956582159-CDS,intron-Distal,intron-Proximal4.002429.08333HepG2PRPF8
chr175658613256586235-CDS,intron-Distal,intron-Proximal3.134197.61934HepG2U2AF2
chr175658283256582913-CDS,intron-Distal,intron-Proximal5.8023713.95835HepG2PPIG
chr175658605656586119-CDS,intron-Distal3.661853.01531K562YBX3
chr175657346056573517-CDS,intron-Distal3.399743.57687HepG2EIF3H
chr175658410456584150-CDS,intron-Distal3.970446.08299HepG2PPIG
chr175657020356570292-CDS,intron-Distal4.516778.43861HepG2EIF3H
chr175658464356584689-CDS,intron-Distal,intron-Proximal3.872203.18234K562BUD13
chr175657015556570206-CDS,intron-Distal,intron-Proximal5.221837.28294K562AQR
chr175657302356573072-CDS,intron-Distal3.462514.00333HepG2EIF3H
chr175658613456586236-CDS,intron-Distal,intron-Proximal4.116374.38653HepG2U2AF1
chr175657020056570218-CDS,intron-Distal,intron-Proximal4.551123.49905HepG2PPIG
chr175658604556586109-CDS,intron-Distal5.1119412.59749HepG2PPIG
chr175658399756584110-CDS,intron-Distal,intron-Proximal5.7671413.18741HepG2PRPF8
chr175658134356581424-CDS,intron-Distal,intron-Proximal4.658043.93614HepG2AQR
chr175658173856581806-CDS,intron-Distal3.454624.77136HepG2PPIG
chr175658291356582942-CDS,intron-Distal3.590124.13746HepG2PPIG
chr175658178456581865-CDS,intron-Distal,intron-Proximal3.533163.91614K562BUD13
chr175658613856586240-CDS,intron-Distal,intron-Proximal3.869724.08501K562U2AF2
chr175657241056572480-CDS,intron-Distal3.275314.41677HepG2EIF3H
chr175656913956569188-CDS,intron-Distal4.905573.81516HepG2EIF3H
chr175658604156586056-CDS,intron-Distal,intron-Proximal3.849043.65750K562YBX3
chr175658196456582027-intron-Distal4.684654.61506HepG2EFTUD2
chr175658196656582015-intron-Distal3.845606.36847HepG2BCLAF1
chr175659108156591192-intron-Distal4.476459.91983HepG2PCBP2
chr175659511956595153-intron-Distal3.411555.65303HepG2PRPF8
chr175658187856581945-intron-Distal,intron-Proximal4.635773.37579K562EFTUD2
chr175658424956584371-intron-Distal,intron-Proximal4.924596.62122HepG2RBFOX2
chr175659218756592244-intron-Distal4.269454.62429HepG2NKRF
chr175658623856586269-intron-Distal,intron-Proximal3.615233.72981HepG2BUD13
chr175657582956575904-intron-Distal5.342677.38423HepG2PCBP2
chr175658197156582016-intron-Distal4.598685.50285K562PRPF8
chr175659094656591035-intron-Distal4.490774.53347HepG2SUGP2
chr175659030456590357-intron-Distal,intron-Proximal3.918804.42776HepG2BUD13
chr175658623656586340-intron-Distal,intron-Proximal3.904883.88027HepG2U2AF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MTMR4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MTMR4 is not available on ENCORE database.

  • 103 RBPs can affect the levels of MTMR4.  








The Knockdown/knockout RNA-Seq assay for MTMR4 is not available on ENCORE database.





103 RBPs can affect the gene expression of MTMR4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MTMR4ENSG00000108389.51453.536401909.77970-0.393803.736802.50100HepG2AATF
MTMR4ENSG00000108389.51997.162001572.316700.345002.727701.73730HepG2ADAR
MTMR4ENSG00000108389.52106.552804042.36060-0.9403013.4840012.40200HepG2AKAP1
MTMR4ENSG00000108389.52392.957803344.70850-0.483104.786303.76580HepG2ASCC1
MTMR4ENSG00000108389.51238.229301694.84480-0.452903.079402.08920HepG2BCCIP
MTMR4ENSG00000108389.5851.981201153.27130-0.436803.746103.06070HepG2BOP1
MTMR4ENSG00000108389.52044.922701711.117300.257002.269301.56550HepG2CALR
MTMR4ENSG00000108389.54249.865603177.705100.419304.077303.14820HepG2CIRBP
MTMR4ENSG00000108389.5914.967201981.27960-1.1146011.131109.63450HepG2CNOT7
MTMR4ENSG00000108389.51939.576201612.415800.266402.735301.72350HepG2YBX3
MTMR4ENSG00000108389.51893.909002541.91920-0.424607.477706.51620HepG2CELF1
MTMR4ENSG00000108389.52100.387601684.603300.318105.300304.19490HepG2DDX19B
MTMR4ENSG00000108389.53171.088402061.793100.6210011.228509.43150HepG2DDX24
MTMR4ENSG00000108389.51759.406303872.26390-1.1381022.2009020.60800HepG2DDX3X
MTMR4ENSG00000108389.52432.215601939.092600.326802.767301.47160HepG2DDX47
MTMR4ENSG00000108389.51070.327001666.36700-0.638705.726104.66140HepG2DDX55
MTMR4ENSG00000108389.51888.943703326.38250-0.8164010.411109.29620HepG2DDX6
MTMR4ENSG00000108389.51999.425601527.021800.388803.840902.69360HepG2DHX30
MTMR4ENSG00000108389.53243.670301742.685400.8962033.9910032.30660HepG2DKC1
MTMR4ENSG00000108389.5986.739401283.86230-0.379703.941202.55100HepG2EIF2S2
MTMR4ENSG00000108389.51213.300403440.70120-1.5038024.9633023.05750HepG2EIF4B
MTMR4ENSG00000108389.54048.971602583.062200.648407.066605.78900HepG2EIF4G2
MTMR4ENSG00000108389.52064.083401466.181300.493304.888003.47680HepG2ESF1
MTMR4ENSG00000108389.53344.019402689.163200.314305.186304.40980HepG2ETF1
MTMR4ENSG00000108389.51851.162001387.023200.416303.220801.85470HepG2FKBP4
MTMR4ENSG00000108389.51639.542802349.16130-0.518903.508802.25050HepG2FUS
MTMR4ENSG00000108389.51960.315303565.52290-0.8630013.7862012.36530HepG2FXR1
MTMR4ENSG00000108389.52337.327403307.52410-0.500904.673803.81990HepG2G3BP1
MTMR4ENSG00000108389.54423.231903511.388500.333002.758801.86990HepG2G3BP2
MTMR4ENSG00000108389.52060.220901200.184100.779409.439608.30520HepG2GPKOW
MTMR4ENSG00000108389.51255.113701834.20660-0.547303.578902.31040HepG2GRSF1
MTMR4ENSG00000108389.51347.172902250.90670-0.740605.049703.13010HepG2HLTF
MTMR4ENSG00000108389.52043.314201598.372200.354203.360702.65700HepG2HNRNPA1
MTMR4ENSG00000108389.52084.256301674.356500.315804.134003.27580HepG2HNRNPF
MTMR4ENSG00000108389.52534.422003349.21730-0.402204.046603.21540HepG2HNRNPK
MTMR4ENSG00000108389.51769.504901145.358400.627407.109906.15410HepG2HNRNPLL
MTMR4ENSG00000108389.5950.910001179.09500-0.310302.651101.71750HepG2HNRNPM
MTMR4ENSG00000108389.52224.747401648.753700.432205.259804.29450HepG2IGF2BP1
MTMR4ENSG00000108389.51619.914803155.13960-0.961804.664303.39690HepG2IGF2BP3
MTMR4ENSG00000108389.51402.641401888.51400-0.429102.833501.62390HepG2KHDRBS1
MTMR4ENSG00000108389.51902.422503586.72410-0.9148013.2269011.92100HepG2MATR3
MTMR4ENSG00000108389.5944.879101382.99560-0.549606.936405.71300HepG2MSI2
MTMR4ENSG00000108389.52072.439503671.20620-0.8249011.8405010.57150HepG2NCBP2
MTMR4ENSG00000108389.51753.658601015.584100.7880011.4723010.04150HepG2NSUN2
MTMR4ENSG00000108389.51124.601701748.16420-0.6364013.8498012.20360HepG2PARN
MTMR4ENSG00000108389.52154.444303271.98370-0.6028016.7955015.50480HepG2PCBP1
MTMR4ENSG00000108389.53134.015802223.876000.494803.089601.99530HepG2PCBP2
MTMR4ENSG00000108389.5898.703001113.30710-0.308902.551401.37440HepG2PKM
MTMR4ENSG00000108389.51782.496201375.115300.374205.579504.52130HepG2PRPF4
MTMR4ENSG00000108389.51705.880303329.49230-0.9648038.9732037.41380HepG2PTBP1
MTMR4ENSG00000108389.53427.903402587.210200.405804.763504.00750HepG2PUF60
MTMR4ENSG00000108389.52031.198802746.40330-0.4352011.7520010.70850HepG2PUM1
MTMR4ENSG00000108389.52302.675302744.41870-0.253202.546301.90240HepG2PUM2
MTMR4ENSG00000108389.52742.320103605.65270-0.394905.944205.07680HepG2QKI
MTMR4ENSG00000108389.51201.443702146.24260-0.837005.946604.94040HepG2RAVER1
MTMR4ENSG00000108389.51497.194602247.63950-0.5861011.7235010.81080HepG2RBM22
MTMR4ENSG00000108389.52060.552703272.46350-0.6673012.1541010.80250HepG2RBM25
MTMR4ENSG00000108389.51280.697301913.78470-0.579504.146802.28880HepG2RBM47
MTMR4ENSG00000108389.52207.074703705.30010-0.7475025.1318023.82700HepG2NELFE
MTMR4ENSG00000108389.52608.778603451.17420-0.403708.180907.20480HepG2RECQL
MTMR4ENSG00000108389.5874.912501309.91260-0.582307.155306.21990HepG2RPS19
MTMR4ENSG00000108389.51508.568102011.42120-0.415003.115702.26660HepG2RPS2
MTMR4ENSG00000108389.52980.216703466.20440-0.217902.747202.15750HepG2SF3B4
MTMR4ENSG00000108389.53315.884902480.660300.418604.153903.31870HepG2SLBP
MTMR4ENSG00000108389.51464.225001834.15600-0.325005.662104.79370HepG2SMN1
MTMR4ENSG00000108389.51320.932802187.54590-0.727806.554405.02690HepG2SMNDC1
MTMR4ENSG00000108389.52562.804803618.05950-0.4975012.9959012.13470HepG2SRSF1
MTMR4ENSG00000108389.51883.277202554.45180-0.439808.721907.69180HepG2SRSF5
MTMR4ENSG00000108389.53802.922102943.563900.369408.266707.40410HepG2SRSF9
MTMR4ENSG00000108389.54416.240102204.113201.0025030.3637029.07990HepG2SSB
MTMR4ENSG00000108389.51136.088301731.38850-0.607904.908003.39760HepG2STIP1
MTMR4ENSG00000108389.52181.525202905.15090-0.413309.912408.85720HepG2SUCLG1
MTMR4ENSG00000108389.54249.711703252.309900.385806.730205.92260HepG2TAF15
MTMR4ENSG00000108389.51468.516601116.387600.395403.374302.58260HepG2TARDBP
MTMR4ENSG00000108389.51355.333402154.80550-0.668905.292103.29990HepG2TRA2A
MTMR4ENSG00000108389.52012.418502527.53840-0.328803.453702.46470HepG2TUFM
MTMR4ENSG00000108389.52259.862701461.974300.628207.527306.49750HepG2U2AF1
MTMR4ENSG00000108389.52060.835901094.193900.913302.779801.78700HepG2U2AF2
MTMR4ENSG00000108389.52668.340002196.194200.280803.743802.54370HepG2UTP18
MTMR4ENSG00000108389.51648.177902360.15290-0.518003.482602.29400HepG2XRCC6
MTMR4ENSG00000108389.51592.729901357.027800.231002.778102.10460HepG2ZC3H8
MTMR4ENSG00000108389.51871.539402349.89160-0.328404.764004.09600HepG2ZNF622
MTMR4ENSG00000108389.51423.450802144.01080-0.590904.631802.92000HepG2ZRANB2
MTMR4ENSG00000108389.51691.476902167.35540-0.357703.003401.72240K562ABCF1
MTMR4ENSG00000108389.53172.602802406.403400.398704.368803.54130K562AKAP8L
MTMR4ENSG00000108389.5809.419201084.67770-0.422303.228901.78000K562DHX30
MTMR4ENSG00000108389.51269.824101915.69800-0.5932011.6990010.37150K562EIF2S2
MTMR4ENSG00000108389.52190.415301676.844800.385402.666701.65120K562EIF3D
MTMR4ENSG00000108389.51128.673501726.98640-0.6136011.061108.61470K562EIF4B
MTMR4ENSG00000108389.5640.83190931.26340-0.539204.242603.08990K562FTO
MTMR4ENSG00000108389.51583.176201994.31780-0.333104.279003.55000K562FXR1
MTMR4ENSG00000108389.52489.968901986.523000.325803.132201.58250K562G3BP1
MTMR4ENSG00000108389.51185.764501570.21450-0.405103.091601.57630K562GEMIN5
MTMR4ENSG00000108389.51906.349602552.81040-0.421305.042904.02290K562GRSF1
MTMR4ENSG00000108389.51135.824701390.80420-0.292202.279701.73020K562HNRNPC
MTMR4ENSG00000108389.51728.946702112.37220-0.289002.061401.37130K562HSPD1
MTMR4ENSG00000108389.52725.355102077.535600.391502.796001.76540K562IGF2BP2
MTMR4ENSG00000108389.53005.095902553.611000.234802.073201.36990K562KIF1C
MTMR4ENSG00000108389.51505.240302179.34570-0.533907.610505.98110K562MATR3
MTMR4ENSG00000108389.53683.635502860.715000.364703.667202.59600K562MBNL1
MTMR4ENSG00000108389.51315.175601776.41980-0.433703.499902.56430K562PCBP3
MTMR4ENSG00000108389.51080.019501362.58370-0.335303.046402.20470K562POLR2G
MTMR4ENSG00000108389.51643.993902121.60400-0.368004.049303.26070K562PTBP1
MTMR4ENSG00000108389.52846.599103578.08080-0.329903.386602.48340K562PUF60
MTMR4ENSG00000108389.52974.998303728.96660-0.325905.117003.79440K562PUM2
MTMR4ENSG00000108389.53780.394502386.115600.6638010.483309.47310K562PUS1
MTMR4ENSG00000108389.53157.887902325.222000.441506.217005.35370K562RBM15
MTMR4ENSG00000108389.51493.987302034.53910-0.445504.634703.51410K562RBM22
MTMR4ENSG00000108389.51453.254002140.98620-0.559006.260204.53400K562NELFE
MTMR4ENSG00000108389.51219.524701552.40050-0.348202.068201.36640K562RPS19
MTMR4ENSG00000108389.53000.421701323.064001.181206.570404.45880K562SF1
MTMR4ENSG00000108389.52805.610201519.704300.884404.474702.79810K562SNRNP200
MTMR4ENSG00000108389.5980.916702079.84340-1.0843026.6903024.50270K562SRSF1
MTMR4ENSG00000108389.51074.147101354.71130-0.334802.766301.71550K562SRSF4
MTMR4ENSG00000108389.51707.651501366.694300.321203.170202.29170K562SYNCRIP
MTMR4ENSG00000108389.51524.037802105.01440-0.465904.634203.71260K562TARDBP
MTMR4ENSG00000108389.51696.056302030.50380-0.259702.051801.35420K562TIA1
MTMR4ENSG00000108389.52106.514201657.945000.345402.283801.30320K562U2AF1
MTMR4ENSG00000108389.52453.429701712.522900.518608.097306.71020K562U2AF2
MTMR4ENSG00000108389.51529.303102014.28980-0.397402.779501.57480K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MTMR4 is not available on ENCORE database.





2 RBPs can affect the splicing of MTMR4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSMTMR4ENSG00000108389.5chr17-5657020256570429565702025657031356572292565736910.113000.000010.00012longerK562AQR
A3SSMTMR4ENSG00000108389.5chr17-5658110456581331565811045658125956581410565815810.131000.000000.00003longerK562AQR
A3SSMTMR4ENSG00000108389.5chr17-5656987156570004565698715656996056570202565704290.135000.000000.00000longerK562AQR
A3SSMTMR4ENSG00000108389.5chr17-5658552156585705565855215658563556585828565859250.078000.000330.00260longerK562AQR
A3SSMTMR4ENSG00000108389.5chr17-5658283256582983565828325658294456584103565842320.125000.010300.05424longerK562AQR
MXEMTMR4ENSG00000108389.5chr17-56581104565812595658141056581605565722925657369156581663565818490.059000.001540.049731includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MTMR4 is not avaliable on ENCORE database.