LARP4B

General Information

Gene Name       : LARP4B
Gene ID             : ENSG00000107929.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: LARP4B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LARP4BENSG00000107929.1420.2726.5023.38ENCSR000AEF
HepG2LARP4BENSG00000107929.1418.4217.4117.91ENCSR985KAT
K562LARP4BENSG00000107929.1427.8529.6128.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LARP4B is not avaliable on ENCORE database.



Proteins bound to RNA
  • LARP4B RNA is bound by 53 proteins.  







eCLIP assay for LARP4B is not avaliable on ENCORE database.





53 proteins are bound to LARP4B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10855653855700-3'-UTR,intron-Distal4.010013.25175K562YBX3
chr10858098858201-3'-UTR,intron-Distal4.6553553.72494K562PUM2
chr10858322858381-3'-UTR,intron-Distal,intron-Proximal3.233557.81029K562UPF1
chr10855652855721-3'-UTR,intron-Distal4.181093.30425K562LIN28B
chr10857168857204-3'-UTR,intron-Distal4.377749.52364K562PUM2
chr10909682909709-3'-UTR,CDS,intron-Distal,intron-Proximal4.551124.67689HepG2PPIG
chr10910023910094-3'-UTR,CDS,intron-Distal,intron-Proximal4.304703.25089HepG2AQR
chr10858091858170-3'-UTR,intron-Distal3.478064.70733K562HNRNPL
chr10860406860507-3'-UTR,CDS,intron-Distal,intron-Proximal4.239656.41317HepG2QKI
chr10857322857381-3'-UTR,intron-Distal5.6872011.14878K562PUM2
chr10931601931693-3'-UTR,5'-UTR,CDS,intron-Distal5.3986910.04389HepG2PPIG
chr10857856857910-3'-UTR,intron-Distal3.010185.99038K562UPF1
chr10909810909823-3'-UTR,CDS,intron-Distal3.660684.96634HepG2PPIG
chr10857252857322-3'-UTR,intron-Distal6.2317776.48893K562PUM2
chr10857273857379-3'-UTR,intron-Distal4.316594.65489K562IGF2BP1
chr10909732909866-3'-UTR,CDS,intron-Distal,intron-Proximal3.3319210.06428HepG2BUD13
chr10855750855830-3'-UTR,intron-Distal4.351303.61671HepG2PABPN1
chr10857223857252-3'-UTR,intron-Distal4.7793114.39081K562PUM2
chr10909684909707-3'-UTR,CDS,intron-Distal,intron-Proximal3.805354.17155HepG2BCLAF1
chr10857153857224-3'-UTR,intron-Distal4.483813.83835HepG2FUBP3
chr10910060910170-3'-UTR,CDS,intron-Distal,intron-Proximal3.7206815.38666HepG2PPIG
chr10910059910159-3'-UTR,CDS,intron-Distal,intron-Proximal3.405684.56702HepG2SRSF1
chr10858077858165-3'-UTR,intron-Distal4.262643.50031HepG2HNRNPL
chr10857063857132-3'-UTR,intron-Distal3.197314.80096K562TIA1
chr10860447860566-3'-UTR,CDS,intron-Distal,intron-Proximal4.574826.64835K562QKI
chr10931677931798-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.422564.92499HepG2AQR
chr10977356977413-5'-UTR,intron-Distal3.191235.18500K562GEMIN5
chr10977414977467-5'-UTR,intron-Distal,intron-Proximal3.429918.49075K562GEMIN5
chr10977386977458-5'-UTR,intron-Distal,intron-Proximal3.3141010.06096HepG2CSTF2T
chr10977467977554-5'-UTR,intron-Distal,intron-Proximal3.2530217.35603K562GEMIN5
chr10977306977411-5'-UTR,intron-Distal3.063174.32259HepG2XRN2
chr10977485977545-5'-UTR,intron-Distal,intron-Proximal3.153319.92716HepG2CSTF2T
chr10977328977384-5'-UTR,intron-Distal4.620237.95190HepG2AQR
chr10977308977398-5'-UTR,intron-Distal3.388613.89652HepG2SFPQ
chr10860682860747-CDS,intron-Distal,intron-Proximal3.274993.73413HepG2PPIG
chr10890962890994-CDS,intron-Distal3.257164.34695HepG2BCLAF1
chr10863802863887-CDS,intron-Distal,intron-Proximal3.540077.16774K562AQR
chr10860991861059-CDS,intron-Distal,intron-Proximal3.830897.98670K562SF3B4
chr10890953891037-CDS,intron-Distal,intron-Proximal3.247277.00923K562SF3B4
chr10863798863893-CDS,intron-Distal,intron-Proximal3.664408.09841HepG2BUD13
chr10890956890993-CDS,intron-Distal4.120223.20743HepG2PPIG
chr10866705866819-CDS,intron-Distal,intron-Proximal3.5359311.49872K562EFTUD2
chr10882395882457-CDS,intron-Distal,intron-Proximal3.826133.26999K562U2AF2
chr10888963889046-CDS,intron-Distal,intron-Proximal4.815129.56916K562SF3B4
chr10866703866785-CDS,intron-Distal,intron-Proximal5.1518925.37826HepG2PRPF8
chr10863823863905-CDS,intron-Distal,intron-Proximal3.8933611.39563HepG2SF3A3
chr10866728866833-CDS,intron-Distal,intron-Proximal5.118726.74224HepG2AQR
chr10876804876864-CDS,intron-Distal,intron-Proximal3.286055.29017HepG2BCLAF1
chr10866663866804-CDS,intron-Distal,intron-Proximal3.0613711.92838K562PRPF8
chr10888879888940-CDS,intron-Distal3.042163.73413HepG2PPIG
chr10866679866812-CDS,intron-Distal,intron-Proximal3.5066811.79768K562AQR
chr10866706866838-CDS,intron-Distal,intron-Proximal3.8848612.20058K562SF3B4
chr10863594863672-CDS,intron-Distal,intron-Proximal3.573354.21913K562EFTUD2
chr10870959871007-CDS,intron-Distal,intron-Proximal5.623638.83608K562AQR
chr10882343882383-CDS,intron-Distal4.922596.13315HepG2BCLAF1
chr10890876890936-CDS,intron-Distal,intron-Proximal3.9055111.40635HepG2PRPF8
chr10875345875417-CDS,intron-Distal3.3850625.34737K562PUM2
chr10876820876930-CDS,intron-Distal,intron-Proximal3.473064.35650K562KHSRP
chr10863811863879-CDS,intron-Distal,intron-Proximal4.4642726.86601K562SF3B4
chr10888904888975-CDS,intron-Distal3.274866.80151HepG2BCLAF1
chr10863795863858-CDS,intron-Distal,intron-Proximal3.468654.65237HepG2U2AF2
chr10890907890947-CDS,intron-Distal,intron-Proximal4.242596.22576HepG2BCLAF1
chr10885167885243-intron-Distal4.088683.19026HepG2HNRNPL
chr10863587863647-intron-Distal,intron-Proximal3.347433.20886K562PRPF8
chr10873507873572-intron-Distal4.301164.28571K562HNRNPM
chr10976760976803-intron-Distal3.132815.40996HepG2PRPF4
chr10961935962009-intron-Distal3.755165.82272HepG2HNRNPL
chr10877996878062-intron-Distal3.641764.25145K562LIN28B
chr10976546976613-intron-Distal3.181095.17784HepG2SFPQ
chr10890836890913-intron-Distal,intron-Proximal4.679075.34107HepG2KHSRP
chr10974365974424-intron-Distal3.246414.55076K562LIN28B
chr10872314872428-intron-Distal3.6865112.33072K562KHSRP
chr10868068868184-intron-Distal4.061603.62737K562HNRNPK
chr10883769883823-intron-Distal3.934355.20960K562EXOSC5
chr10976905976973-intron-Distal3.460896.15110K562EWSR1
chr10884018884036-intron-Distal3.214543.43829K562EXOSC5
chr10902972903091-intron-Distal3.754573.68481HepG2HNRNPM
chr10976991977041-intron-Distal5.3756611.48205HepG2PRPF4
chr10976891977029-intron-Distal4.638456.73547K562FUS
chr10959620959690-intron-Distal3.709284.61874HepG2HNRNPC
chr10898269898407-intron-Distal4.301123.62366HepG2HNRNPM
chr10904426904508-intron-Distal4.173744.14103K562KHSRP
chr10917319917374-intron-Distal4.704806.19745HepG2HNRNPM
chr10903102903200-intron-Distal4.513123.96879HepG2MATR3
chr10893314893366-intron-Distal3.643825.79523HepG2SUGP2
chr10976011976063-intron-Distal3.452453.94533K562HNRNPM
chr10976741976795-intron-Distal3.899295.70158K562EWSR1
chr10976551976628-intron-Distal3.441429.18412K562NONO
chr10945390945475-intron-Distal3.395764.31768HepG2KHSRP
chr10976997977091-intron-Distal3.101786.64252K562XRN2
chr10877031877104-intron-Distal3.715655.91510K562TARDBP
chr10976999977067-intron-Distal4.891927.57617HepG2GTF2F1
chr10883357883385-intron-Distal4.155043.30687K562EXOSC5
chr10976977977101-intron-Distal3.8019512.80816HepG2NKRF
chr10885750885902-intron-Distal4.350894.66899HepG2HNRNPM
chr10964510964577-intron-Distal3.000513.00589HepG2HNRNPC
chr10977304977368-intron-Distal4.4901817.56917HepG2CSTF2T
chr10893114893189-intron-Distal4.616344.66737HepG2MATR3
chr10976725976793-intron-Distal3.487618.85764K562CSTF2T
chr10976663976696-intron-Distal3.478753.84725K562NONO
chr10894138894191-intron-Distal4.962956.45442HepG2HNRNPM
chr10863610863665-intron-Distal,intron-Proximal3.162636.02419K562AQR
chr10976979977136-intron-Distal4.6717116.52735K562GTF2F1
chr10892414892510-intron-Distal3.541395.72064HepG2MATR3
chr10976903976958-intron-Distal3.321915.78788K562FASTKD2
chr10970897970948-intron-Distal5.081255.20135HepG2QKI
chr10868328868436-intron-Distal3.068765.99952K562EWSR1
chr10945458945488-intron-Distal4.020134.09242HepG2QKI
chr10868142868198-intron-Distal4.133823.57018HepG2HNRNPK
chr10883566883655-intron-Distal4.997488.39553K562HNRNPM
chr10883627883692-intron-Distal5.5821210.34009K562EXOSC5
chr10976983977095-intron-Distal4.2132312.87138K562CSTF2T
chr10977319977366-intron-Distal4.390186.05701HepG2FAM120A
chr10977043977123-intron-Distal4.7366212.13666HepG2PRPF4
chr10874436874490-intron-Distal4.592454.78076K562HNRNPM
chr10976941976991-intron-Distal3.347643.01707K562SLTM
chr10977306977354-intron-Distal4.013453.24283HepG2NKRF
chr10976590976625-intron-Distal4.404469.71076HepG2HNRNPM
chr10976997977048-intron-Distal3.824135.16186K562NONO
chr10884045884078-intron-Distal3.476323.43875K562EXOSC5
chr10976867976971-intron-Distal3.480723.31157HepG2KHSRP
chr10976696976787-intron-Distal5.0071916.30834K562NONO
chr10976881976961-intron-Distal3.215925.82446K562AKAP8L
chr10919229919294-intron-Distal3.958653.27946HepG2HNRNPM
chr10958754958804-intron-Distal3.209753.63132HepG2HNRNPC
chr10977162977210-intron-Distal4.272938.83628K562DROSHA
chr10892964893027-intron-Distal3.234235.20425HepG2MATR3
chr10888751888834-intron-Distal,intron-Proximal3.704434.93376K562PRPF8
chr10976570976620-intron-Distal3.003786.55440HepG2CSTF2T
chr10874035874083-intron-Distal5.5736512.29617HepG2HNRNPM
chr10918874918928-intron-Distal3.455194.28420HepG2HNRNPM
chr10889759889810-intron-Distal3.366924.21828HepG2TIAL1
chr10894221894261-intron-Distal3.146473.00129HepG2SUGP2
chr10874024874077-intron-Distal4.214414.02846K562HNRNPM
chr10976879976980-intron-Distal4.326157.21663HepG2PCBP2
chr10876010876058-intron-Distal3.747893.95921HepG2U2AF2
chr10976874976986-intron-Distal4.3714624.87205HepG2FAM120A
chr10892649892715-intron-Distal4.639245.01910HepG2MATR3
chr10976569976633-intron-Distal3.934403.56049HepG2FUS
chr10892425892491-intron-Distal4.224423.98115K562MATR3
chr10890765890884-intron-Distal,intron-Proximal3.4074010.80311K562KHSRP
chr10976869976957-intron-Distal3.068655.36984K562XRN2
chr10875897875941-intron-Distal3.910713.25538K562KHSRP
chr10976767976790-intron-Distal3.710123.77708K562GTF2F1
chr10976576976624-intron-Distal4.044505.16622K562FMR1
chr10872282872375-intron-Distal4.695144.79321K562RBFOX2
chr10871815871927-intron-Distal,intron-Proximal3.516596.57673K562KHSRP
chr10977013977027-intron-Distal4.113933.97967K562DDX51
chr10882007882069-intron-Distal3.134433.70419K562KHDRBS1
chr10969969970008-intron-Distal3.003646.71219HepG2HNRNPC
chr10883087883169-intron-Distal4.125204.37030K562KHSRP
chr10871624871699-intron-Distal,intron-Proximal3.652457.04237K562PRPF8
chr10976850976983-intron-Distal4.7103326.36090K562CSTF2T
chr10883488883549-intron-Distal4.424803.60944K562TARDBP
chr10909913910028-intron-Distal,intron-Proximal4.198239.29751K562KHSRP
chr10976874976984-intron-Distal4.920079.47718HepG2XRN2
chr10976845976938-intron-Distal4.303134.94796HepG2DROSHA
chr10976668976695-intron-Distal4.211804.27402K562CSTF2T
chr10868267868439-intron-Distal4.029843.74583HepG2PTBP1
chr10863595863640-intron-Distal,intron-Proximal4.875225.11689HepG2RBM22
chr10976860976937-intron-Distal5.046438.09947K562NONO
chr10977154977250-intron-Distal3.727556.87801K562XRN2
chr10883514883554-intron-Distal4.500984.80399K562EXOSC5
chr10873587873629-intron-Distal3.458653.90822HepG2HNRNPM
chr10961220961233-intron-Distal4.2483610.61900HepG2HNRNPC
chr10874440874489-intron-Distal5.6035616.32623HepG2HNRNPM
chr10883581883661-intron-Distal3.408633.11000HepG2HNRNPM
chr10977143977203-intron-Distal4.751996.64314K562CSTF2T
chr10976982977091-intron-Distal3.4980415.35552HepG2CSTF2T
chr10868300868445-intron-Distal3.210313.18404K562FUS
chr10976748976791-intron-Distal3.488246.38416HepG2FAM120A
chr10973145973263-intron-Distal4.571648.88051HepG2PCBP2
chr10976749976818-intron-Distal3.8413918.27027HepG2CSTF2T
chr10918670918730-intron-Distal3.606374.86210HepG2HNRNPM
chr10911772911865-intron-Distal4.324046.00936HepG2XPO5
chr10976746976797-intron-Distal3.760737.19928HepG2GTF2F1
chr10861012861080-intron-Distal,intron-Proximal5.342517.45449HepG2SF3B4
chr10976859976982-intron-Distal5.5254450.51113HepG2CSTF2T
chr10871298871357-intron-Distal,intron-Proximal3.344264.76825K562KHSRP
chr10892713892834-intron-Distal4.624596.19517K562MATR3
chr10976986977120-intron-Distal3.3272818.43113HepG2FAM120A
chr10976872976991-intron-Distal4.7389225.56356HepG2PRPF4
chr10976893976958-intron-Distal3.556749.91097K562GEMIN5
chr10976064976116-intron-Distal3.962096.92280HepG2HNRNPM
chr10976883976999-intron-Distal4.7460019.55051HepG2GTF2F1
chr10977138977212-intron-Distal5.078547.66822HepG2PRPF4
chr10976487976532-intron-Distal3.704465.37976K562NONO
chr10977135977218-intron-Distal3.587837.23144HepG2FAM120A
chr10894101894193-intron-Distal3.953306.01105K562HNRNPM
chr10884167884211-intron-Distal5.260399.35180K562EXOSC5
chr10935253935364-intron-Distal3.830586.63711K562TARDBP
chr10866837866980-intron-Distal,intron-Proximal3.436228.43196K562KHSRP
chr10976866976979-intron-Distal5.0542719.43834K562GTF2F1
chr10863518863575-intron-Distal,intron-Proximal3.477363.54718K562PRPF8
chr10890463890542-intron-Distal4.110346.98930HepG2U2AF2
chr10976994977039-intron-Distal3.505994.20405K562EWSR1
chr10976020976062-intron-Distal4.2180410.94220HepG2HNRNPM
chr10972743972799-intron-Distal3.652723.37821K562XRCC6
chr10976876976983-intron-Distal3.761297.39307HepG2FASTKD2
chr10884494884530-intron-Distal4.083026.41051K562EXOSC5
chr10967897967983-intron-Distal4.689405.86222K562NONO
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LARP4B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LARP4B is not available on ENCORE database.

  • 61 RBPs can affect the levels of LARP4B.  








The Knockdown/knockout RNA-Seq assay for LARP4B is not available on ENCORE database.





61 RBPs can affect the gene expression of LARP4B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LARP4BENSG00000107929.101791.256501314.705900.446108.498407.55190HepG2ACO1
LARP4BENSG00000107929.102328.399801496.089100.638009.087508.08050HepG2BOP1
LARP4BENSG00000107929.101566.181001314.331400.252803.207902.50180HepG2CKAP4
LARP4BENSG00000107929.10985.766701215.87380-0.302703.714102.76610HepG2DDX19B
LARP4BENSG00000107929.10825.26250969.00980-0.231702.232301.63430HepG2DNAJC2
LARP4BENSG00000107929.101729.707901152.259900.586005.754404.91770HepG2EIF2S1
LARP4BENSG00000107929.101838.911501518.827500.275803.203202.31620HepG2EIF4G1
LARP4BENSG00000107929.101096.964001666.98350-0.603705.080304.06650HepG2FIP1L1
LARP4BENSG00000107929.10989.25530760.130400.380002.861702.06230HepG2FUBP3
LARP4BENSG00000107929.10756.56010985.94630-0.382102.442901.49070HepG2GNB2L1
LARP4BENSG00000107929.10899.153901097.94370-0.288201.890501.30630HepG2HNRNPC
LARP4BENSG00000107929.10777.907701090.68720-0.487607.194306.25370HepG2HNRNPU
LARP4BENSG00000107929.101843.759301211.443000.605806.413805.42410HepG2IGF2BP2
LARP4BENSG00000107929.101004.972301349.46860-0.425203.779602.83760HepG2MSI2
LARP4BENSG00000107929.101628.401001176.859800.468408.160307.20890HepG2PCBP1
LARP4BENSG00000107929.101582.721401098.851800.526303.229702.10960HepG2PCBP2
LARP4BENSG00000107929.10817.88650972.81160-0.250301.960901.33200HepG2PPIL4
LARP4BENSG00000107929.101410.395301197.551600.235902.133101.64080HepG2PTBP1
LARP4BENSG00000107929.10925.129001457.28580-0.655608.971707.98140HepG2PUF60
LARP4BENSG00000107929.101514.211201296.865500.223401.854501.32790HepG2QKI
LARP4BENSG00000107929.101523.466201759.96380-0.208201.874401.42670HepG2RBM22
LARP4BENSG00000107929.101450.456901177.031300.301302.548401.89820HepG2RBM25
LARP4BENSG00000107929.101395.998501041.773600.422202.162301.32520HepG2RPS10
LARP4BENSG00000107929.102504.293101743.958900.521903.659102.88030HepG2SF3A3
LARP4BENSG00000107929.101620.230101246.711200.378005.405204.62580HepG2SF3B4
LARP4BENSG00000107929.103327.160901636.456301.0236010.953409.41040HepG2SNRNP70
LARP4BENSG00000107929.102786.467101987.809900.4872011.9998011.15190HepG2SRFBP1
LARP4BENSG00000107929.101634.004701301.335200.328304.475403.90980HepG2SRSF1
LARP4BENSG00000107929.101768.700401058.738800.7402020.5394019.29120HepG2SRSF9
LARP4BENSG00000107929.101304.209101725.88180-0.404206.606205.87800HepG2SSB
LARP4BENSG00000107929.101266.620101761.50200-0.475803.693402.23120HepG2SSRP1
LARP4BENSG00000107929.101498.29350925.450600.695006.484505.51540HepG2SUPV3L1
LARP4BENSG00000107929.101335.149601074.771300.312902.829301.98390HepG2TIA1
LARP4BENSG00000107929.10845.606601069.27230-0.338603.779203.14230HepG2TRIM56
LARP4BENSG00000107929.101945.140301506.915200.368202.516201.72010HepG2UBE2L3
LARP4BENSG00000107929.101347.548201546.62900-0.198801.963201.35840HepG2UPF1
LARP4BENSG00000107929.102169.001801700.990100.350607.045606.27780HepG2ZNF622
LARP4BENSG00000107929.102484.572602027.883300.292902.535101.41190K562AARS
LARP4BENSG00000107929.102331.082602840.91430-0.285402.960901.73480K562CCDC124
LARP4BENSG00000107929.103087.350203946.08270-0.354106.287404.58280K562CPEB4
LARP4BENSG00000107929.101959.361602603.58180-0.410105.214804.14580K562CPSF6
LARP4BENSG00000107929.101822.951902153.52240-0.240402.692301.50580K562EIF2S1
LARP4BENSG00000107929.102215.190802862.05910-0.369605.839504.85330K562EIF2S2
LARP4BENSG00000107929.101643.530601370.571800.261902.372801.63330K562EIF3G
LARP4BENSG00000107929.101670.212502048.29850-0.294402.331101.57600K562EIF4A3
LARP4BENSG00000107929.101739.887302987.95740-0.780207.225205.79350K562FIP1L1
LARP4BENSG00000107929.102102.854202649.10970-0.333202.873102.00140K562FMR1
LARP4BENSG00000107929.101822.771102245.37120-0.300802.126901.33050K562FTO
LARP4BENSG00000107929.102717.849502130.146300.351405.350204.54670K562FXR1
LARP4BENSG00000107929.101899.528702485.76870-0.388104.071503.11220K562GPKOW
LARP4BENSG00000107929.102580.880303813.94520-0.563409.248207.84360K562GRSF1
LARP4BENSG00000107929.101756.569902219.18830-0.337303.272202.63120K562HNRNPC
LARP4BENSG00000107929.102681.751804051.26960-0.595205.430104.33300K562HSPD1
LARP4BENSG00000107929.102007.598702426.39230-0.273302.214301.43110K562METAP2
LARP4BENSG00000107929.102410.101602976.03020-0.304305.210504.12450K562MTPAP
LARP4BENSG00000107929.101674.573802045.33290-0.288502.749801.52590K562NCBP2
LARP4BENSG00000107929.102872.587203306.66110-0.203003.742402.89000K562NSUN2
LARP4BENSG00000107929.102556.140801991.570800.360003.551302.44570K562PCBP2
LARP4BENSG00000107929.102371.214303391.68240-0.516404.969003.81770K562PPIG
LARP4BENSG00000107929.101541.942701989.70090-0.367803.117502.15120K562PSIP1
LARP4BENSG00000107929.104337.732605211.85130-0.264903.634702.53400K562PUM2
LARP4BENSG00000107929.102434.513802015.203200.272602.325901.33920K562SAFB
LARP4BENSG00000107929.102112.862701744.994700.275902.611101.78280K562SF3B4
LARP4BENSG00000107929.101395.570201720.75990-0.302202.346001.41960K562SRFBP1
LARP4BENSG00000107929.102947.470102131.919000.467206.565205.48690K562SRSF1
LARP4BENSG00000107929.102688.672802268.525700.245002.339401.58400K562SYNCRIP
LARP4BENSG00000107929.102681.394703119.71370-0.218403.223902.31720K562WDR43
LARP4BENSG00000107929.103160.685803853.23270-0.285802.572601.74640K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LARP4B is not available on ENCORE database.





8 RBPs can affect the splicing of LARP4B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELARP4BENSG00000107929.10chr10-8905828907188888718890088909168909950.270000.000280.03292includedHepG2DDX59
SELARP4BENSG00000107929.10chr10-9159529160239100629102109303869304460.243000.003430.03923includedHepG2U2AF2
SELARP4BENSG00000107929.10chr10-876806877016875620875674882342882446-0.075000.005030.04675excludedK562AQR
SELARP4BENSG00000107929.10chr10-890916890995888871889008909682909823-0.102000.005090.06306excludedK562PUS1
SELARP4BENSG00000107929.10chr10-8909168909958888718890089096829098230.070000.004540.08219includedHepG2SRSF1
SELARP4BENSG00000107929.10chr10-9159529160239100629102109303869304460.128000.000000.00449includedK562PUM2
A3SSLARP4BENSG00000107929.10chr10-8636648639028636648638298667398667850.072000.000200.00167longerK562AQR
A3SSLARP4BENSG00000107929.10chr10-8756208757138756208756748768068769170.080000.000000.00001longerK562AQR
A3SSLARP4BENSG00000107929.10chr10-8909168910308909168909959096829099070.063000.000060.00057longerK562AQR
A5SSLARP4BENSG00000107929.10chr10-871004871256871124871256866739866785-0.201000.000210.02306shorterK562RBM15
A5SSLARP4BENSG00000107929.10chr10-871004871256871124871256866739866785-0.087000.000120.05367shorterK562NPM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LARP4B is not avaliable on ENCORE database.