KCNE3

General Information

Gene Name : KCNE3
Gene ID : ENSG00000175538.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KCNE3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KCNE3	ENSG00000175538.10	0.00	0.00	0.00	ENCSR000AEF
HepG2	KCNE3	ENSG00000175538.10	2.89	1.89	2.39	ENCSR985KAT
K562	KCNE3	ENSG00000175538.10	6.06	5.32	5.69	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KCNE3 is not avaliable on ENCORE database.

Proteins bound to RNA

KCNE3 RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for KCNE3 is not avaliable on ENCORE database.

1 proteins are bound to KCNE3 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	74167325	74167378	-	3'-UTR,intron-Distal	4.42672	12.03763	K562	UPF1
chr11	74167113	74167177	-	3'-UTR,intron-Distal	5.13033	7.60978	K562	UPF1
chr11	74167245	74167276	-	3'-UTR,intron-Distal	4.19013	3.69433	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 3 of 3 entries

eCLIP assay for KCNE3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KCNE3 is not available on ENCORE database.
104 RBPs can affect the levels of KCNE3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KCNE3 is not available on ENCORE database.

104 RBPs can affect the gene expression of KCNE3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KCNE3	ENSG00000175538.6	761.31450	180.71290	2.07470	47.92250	45.94350	HepG2	QKI
KCNE3	ENSG00000175538.6	18.42350	188.81160	-3.35730	24.38980	22.98390	HepG2	AKAP1
KCNE3	ENSG00000175538.6	244.98970	36.04670	2.76470	22.35910	20.91690	HepG2	PUS1
KCNE3	ENSG00000175538.6	66.84540	487.25220	-2.86580	19.99630	18.56440	K562	PUS1
KCNE3	ENSG00000175538.6	165.17180	29.92220	2.46460	16.84450	15.04540	HepG2	MSI2
KCNE3	ENSG00000175538.6	344.13890	51.18400	2.74910	16.23630	14.44100	HepG2	CNOT7
KCNE3	ENSG00000175538.6	100.39330	472.04390	-2.23330	15.66250	14.42580	K562	AGGF1
KCNE3	ENSG00000175538.6	44.83890	181.31330	-2.01570	15.05820	14.14370	HepG2	SRSF1
KCNE3	ENSG00000175538.6	234.56030	82.08490	1.51470	13.82210	12.59980	HepG2	CELF1
KCNE3	ENSG00000175538.6	387.87710	148.42290	1.38580	13.28660	11.73180	HepG2	CIRBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 127 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KCNE3 is not available on ENCORE database.

1 RBPs can affect the splicing of KCNE3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	KCNE3	ENSG00000175538.6	chr11	-	74172999	74173148			74165885	74168648	74178442	74178673	-0.22200	0.00045	0.00881	excluded	K562	PUS1

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KCNE3

General Information

Functions

Localization

Domains (AlphaFold: KCNE3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KCNE3 is not avaliable on ENCORE database.

1 proteins are bound to KCNE3 RNA:

eCLIP assay for KCNE3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KCNE3 is not available on ENCORE database.

104 RBPs can affect the gene expression of KCNE3 :

The Knockdown/knockout RNA-Seq assay for KCNE3 is not available on ENCORE database.

1 RBPs can affect the splicing of KCNE3 :

The Knockdown/knockout RNA-Seq assay for KCNE3 is not avaliable on ENCORE database.