KATNAL1

General Information

Gene Name       : KATNAL1
Gene ID             : ENSG00000102781.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KATNAL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KATNAL1ENSG00000102781.1311.649.1710.41ENCSR000AEF
HepG2KATNAL1ENSG00000102781.132.924.533.73ENCSR985KAT
K562KATNAL1ENSG00000102781.133.343.673.50ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KATNAL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • KATNAL1 RNA is bound by 7 proteins.  







eCLIP assay for KATNAL1 is not avaliable on ENCORE database.





7 proteins are bound to KATNAL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr133078004130780085-3'-UTR,intron-Distal5.7425914.67539K562HNRNPL
chr133077997530780041-3'-UTR,intron-Distal5.4436122.44635K562HNRNPL
chr133077971730779794-3'-UTR,intron-Distal5.011867.92673K562HNRNPL
chr133077997330780020-3'-UTR,intron-Distal4.9512315.85971K562AGGF1
chr133077974030779824-3'-UTR,intron-Distal5.9455911.61214K562AGGF1
chr133077973930779804-3'-UTR,intron-Distal5.038136.10900HepG2HNRNPL
chr133077997630780059-3'-UTR,intron-Distal5.6438924.85467HepG2HNRNPL
chr133077990930779954-3'-UTR,intron-Distal3.907443.60879K562HNRNPL
chr133078008030780135-3'-UTR,intron-Distal3.8177311.07382HepG2HNRNPL
chr133078063330780740-3'-UTR,intron-Distal5.247508.40676K562UPF1
chr133078008530780104-3'-UTR,intron-Distal3.750617.96063K562HNRNPL
chr133078002030780080-3'-UTR,intron-Distal5.3089523.50124K562AGGF1
chr133085781530857881-CDS,intron-Distal4.406383.02457HepG2BCLAF1
chr133085776930857889-CDS,intron-Distal3.009633.19733K562ZNF622
chr133081459630814674-CDS,intron-Distal,intron-Proximal4.190923.53690K562ZNF622
chr133082077630820824-intron-Distal4.507025.12361K562EXOSC5
chr133081936730819479-intron-Distal4.299503.89080K562EXOSC5
chr133078719530787265-intron-Distal4.389794.80399K562EXOSC5
chr133082012130820174-intron-Distal5.5507510.34146K562EXOSC5
chr133078668430786728-intron-Distal4.064763.30696K562EXOSC5
chr133082160730821660-intron-Distal4.389794.80466K562EXOSC5
chr133082131530821373-intron-Distal4.752596.41216K562EXOSC5
chr133082104230821122-intron-Distal5.334698.04096K562EXOSC5
chr133081868930818733-intron-Distal5.014997.71312K562EXOSC5
chr133081612130816356-intron-Distal3.214913.07751K562KHSRP
chr133082000930820046-intron-Distal4.288733.59909K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KATNAL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KATNAL1 is not available on ENCORE database.

  • 91 RBPs can affect the levels of KATNAL1.  








The Knockdown/knockout RNA-Seq assay for KATNAL1 is not available on ENCORE database.





91 RBPs can affect the gene expression of KATNAL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KATNAL1ENSG00000102781.9617.26450365.791400.7548010.574509.54600HepG2ACO1
KATNAL1ENSG00000102781.9470.82810354.212300.410502.235201.33890HepG2ADAR
KATNAL1ENSG00000102781.9651.91200470.721000.469702.538602.02730HepG2AKAP1
KATNAL1ENSG00000102781.9631.29210367.526600.780406.690705.55120HepG2AKAP8L
KATNAL1ENSG00000102781.9282.30470389.49640-0.464402.231401.52230HepG2ASCC1
KATNAL1ENSG00000102781.9190.27020325.83430-0.776104.157903.01210HepG2BCCIP
KATNAL1ENSG00000102781.9260.09710454.52150-0.805303.354102.70210HepG2BOP1
KATNAL1ENSG00000102781.9411.91860296.178200.475802.866301.61320HepG2BUD13
KATNAL1ENSG00000102781.9565.22690370.043800.611004.325403.37200HepG2CIRBP
KATNAL1ENSG00000102781.9261.65570365.73190-0.483103.505002.77230HepG2CKAP4
KATNAL1ENSG00000102781.9602.69800440.464000.452304.126003.37120HepG2CELF1
KATNAL1ENSG00000102781.9383.40630473.57520-0.304701.957401.31770HepG2DAZAP1
KATNAL1ENSG00000102781.9213.62960338.31380-0.663305.810204.66040HepG2DDX19B
KATNAL1ENSG00000102781.9500.17070338.251300.564203.989903.18910HepG2DDX21
KATNAL1ENSG00000102781.9638.83750450.945900.502403.173902.50970HepG2DDX3X
KATNAL1ENSG00000102781.9509.13110349.968400.540704.742103.89830HepG2DKC1
KATNAL1ENSG00000102781.9624.85230411.571900.602304.084303.31170HepG2EIF4A3
KATNAL1ENSG00000102781.9306.65670447.57950-0.545503.315302.42810HepG2EIF4G2
KATNAL1ENSG00000102781.9736.56320399.201800.883607.028205.86060HepG2FIP1L1
KATNAL1ENSG00000102781.9339.76050221.856600.614803.807802.89410HepG2FUBP3
KATNAL1ENSG00000102781.9259.63220432.79160-0.737204.249502.88150HepG2FUS
KATNAL1ENSG00000102781.9590.44930408.836300.530203.514902.50470HepG2G3BP2
KATNAL1ENSG00000102781.9642.89170473.097700.442301.875601.34140HepG2GPKOW
KATNAL1ENSG00000102781.9167.90430336.95890-1.004906.149704.48510HepG2GRSF1
KATNAL1ENSG00000102781.9305.58510399.92390-0.388202.242301.59180HepG2HNRNPF
KATNAL1ENSG00000102781.9313.88140431.38110-0.458703.513402.76130HepG2HNRNPL
KATNAL1ENSG00000102781.9195.11860397.88900-1.0280012.2778011.07670HepG2HNRNPU
KATNAL1ENSG00000102781.9620.76270393.783300.656504.119902.87590HepG2KHSRP
KATNAL1ENSG00000102781.9230.09130363.81570-0.661003.187701.84120HepG2KRR1
KATNAL1ENSG00000102781.9260.93020417.63960-0.678603.863403.12880HepG2MATR3
KATNAL1ENSG00000102781.9433.51170323.055900.424202.239001.50830HepG2MSI2
KATNAL1ENSG00000102781.9648.68670427.491200.601504.195803.42130HepG2NCBP2
KATNAL1ENSG00000102781.9585.95710469.597900.319302.162601.48670HepG2NOL12
KATNAL1ENSG00000102781.9504.63300332.677800.601002.643701.78020HepG2PABPC1
KATNAL1ENSG00000102781.9297.05990393.84610-0.406902.590201.76730HepG2PARN
KATNAL1ENSG00000102781.9600.68590403.558700.573706.102705.35300HepG2PTBP1
KATNAL1ENSG00000102781.9373.76470475.88040-0.348502.488901.91970HepG2PUM1
KATNAL1ENSG00000102781.9811.50070372.585201.1229024.9843023.47620HepG2PUS1
KATNAL1ENSG00000102781.9604.97430437.093500.468803.578802.88130HepG2QKI
KATNAL1ENSG00000102781.9742.15880395.411300.908305.562104.58300HepG2RAVER1
KATNAL1ENSG00000102781.9610.77300483.516400.337002.292701.50410HepG2RBM15
KATNAL1ENSG00000102781.9715.73110531.738100.428603.826303.24290HepG2RBM22
KATNAL1ENSG00000102781.9656.37770396.679300.726507.410406.35160HepG2RBM25
KATNAL1ENSG00000102781.9601.89710449.133600.422303.238702.66300HepG2NELFE
KATNAL1ENSG00000102781.9264.78670354.33970-0.420302.640702.00890HepG2SAFB2
KATNAL1ENSG00000102781.9235.46840344.09160-0.547302.566201.30530HepG2SART3
KATNAL1ENSG00000102781.9218.47950384.64460-0.816005.076402.86660HepG2SND1
KATNAL1ENSG00000102781.9296.85320442.62460-0.576304.750403.96750HepG2SRSF5
KATNAL1ENSG00000102781.9306.15630392.89910-0.359901.948401.35340HepG2SRSF7
KATNAL1ENSG00000102781.9605.74220356.790000.7635010.452209.49900HepG2SRSF9
KATNAL1ENSG00000102781.9775.74670521.461900.572907.644706.87430HepG2SSB
KATNAL1ENSG00000102781.9378.27260503.37560-0.412203.226502.56560HepG2SUCLG1
KATNAL1ENSG00000102781.9523.04030318.913700.713704.459003.63140HepG2SUPV3L1
KATNAL1ENSG00000102781.9131.17670439.89730-1.745707.459606.34500HepG2TARDBP
KATNAL1ENSG00000102781.9296.19300386.63600-0.384402.102901.65520HepG2TIAL1
KATNAL1ENSG00000102781.9150.67990390.07880-1.3723019.4277018.10590HepG2TRIM56
KATNAL1ENSG00000102781.9236.85070341.47300-0.527802.875502.23590HepG2U2AF1
KATNAL1ENSG00000102781.9727.95210463.593700.650903.602702.64170HepG2UBE2L3
KATNAL1ENSG00000102781.991.78090188.38730-1.037405.630104.53950HepG2UCHL5
KATNAL1ENSG00000102781.9448.95410358.930000.322802.043701.42780HepG2UPF1
KATNAL1ENSG00000102781.9266.70260368.94500-0.468203.076801.97860HepG2UTP18
KATNAL1ENSG00000102781.9249.05050346.53590-0.476602.959102.34320HepG2UTP3
KATNAL1ENSG00000102781.9564.35670388.774900.537602.547501.34430HepG2XRCC5
KATNAL1ENSG00000102781.9219.61230313.93580-0.515502.285901.62130HepG2XRN2
KATNAL1ENSG00000102781.9409.58660292.620000.485003.712502.95380HepG2ZC3H8
KATNAL1ENSG00000102781.9218.12190394.75720-0.855809.057708.21410HepG2ZNF622
KATNAL1ENSG00000102781.9970.83390603.328900.6862011.3262010.27180K562AGGF1
KATNAL1ENSG00000102781.9939.64460627.797500.581706.063205.07170K562AKAP8L
KATNAL1ENSG00000102781.9826.13930546.248600.596705.656903.85550K562CIRBP
KATNAL1ENSG00000102781.9437.73170567.90760-0.375602.699701.60680K562CPEB4
KATNAL1ENSG00000102781.91062.00320825.566000.363203.056802.03400K562CELF1
KATNAL1ENSG00000102781.9433.14450304.594200.507902.650501.63860K562EIF3D
KATNAL1ENSG00000102781.9554.76080374.925200.565203.753902.67400K562FTO
KATNAL1ENSG00000102781.9307.53970466.07730-0.599803.146902.50770K562FXR1
KATNAL1ENSG00000102781.9688.13630484.294700.506702.595101.91390K562G3BP2
KATNAL1ENSG00000102781.9469.65480355.134800.403102.613001.50460K562GLRX3
KATNAL1ENSG00000102781.9255.54700468.77470-0.875308.063806.76200K562GRSF1
KATNAL1ENSG00000102781.9882.35980443.252700.993105.103503.28310K562HNRNPA2B1
KATNAL1ENSG00000102781.9241.18190340.32180-0.496802.296201.45160K562HNRNPM
KATNAL1ENSG00000102781.9260.33870163.504000.671003.331001.68430K562ILF3
KATNAL1ENSG00000102781.91011.79020666.227500.602704.251603.19780K562KIF1C
KATNAL1ENSG00000102781.9369.08280535.63780-0.537304.270903.22280K562MAGOH
KATNAL1ENSG00000102781.9380.57520534.59300-0.490303.626702.55770K562MATR3
KATNAL1ENSG00000102781.9919.32030715.654600.361202.484501.41610K562MSI2
KATNAL1ENSG00000102781.9750.86810530.319000.501602.514001.35090K562PABPC1
KATNAL1ENSG00000102781.9684.71180387.524300.821102.423401.51040K562PABPN1
KATNAL1ENSG00000102781.9337.67480469.69580-0.476103.052702.18460K562PPIG
KATNAL1ENSG00000102781.9178.09240276.79680-0.636202.913902.14540K562PRPF8
KATNAL1ENSG00000102781.9932.80480763.451600.288902.262101.39230K562PUM2
KATNAL1ENSG00000102781.91225.41840622.557000.9769014.7583013.54410K562PUS1
KATNAL1ENSG00000102781.9696.83260462.039500.592702.796101.37250K562RAVER1
KATNAL1ENSG00000102781.9805.55090606.626000.409103.798403.11980K562RBM15
KATNAL1ENSG00000102781.9381.00980499.13760-0.389602.042401.32570K562RBM22
KATNAL1ENSG00000102781.9333.13020486.44880-0.546203.518901.89020K562RBM34
KATNAL1ENSG00000102781.9194.20340281.97750-0.538002.206801.48070K562RPS19
KATNAL1ENSG00000102781.9292.43020411.61480-0.493202.354601.43980K562RPS3
KATNAL1ENSG00000102781.9544.64070394.751200.464302.483201.56440K562SF3B1
KATNAL1ENSG00000102781.9344.51230503.41700-0.547204.547703.44060K562SF3B4
KATNAL1ENSG00000102781.9283.86550510.12000-0.845608.152906.94910K562SRSF1
KATNAL1ENSG00000102781.9436.66370268.050600.703904.681003.33200K562SUPV3L1
KATNAL1ENSG00000102781.9333.62910516.34130-0.630104.792003.85120K562TARDBP
KATNAL1ENSG00000102781.9383.59130498.05200-0.376702.244001.51370K562TIA1
KATNAL1ENSG00000102781.9559.93280437.324300.356502.546601.33370K562TROVE2
KATNAL1ENSG00000102781.9552.65220439.924400.329002.040601.41750K562UPF1
KATNAL1ENSG00000102781.9553.87490376.436600.557104.467603.34260K562WDR3
KATNAL1ENSG00000102781.9840.82430478.909200.812003.132701.41570K562YTHDC2
KATNAL1ENSG00000102781.9899.45420612.129000.555105.563504.27060K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KATNAL1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of KATNAL1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for KATNAL1 is not avaliable on ENCORE database.