ITGB3BP

General Information

Gene Name       : ITGB3BP
Gene ID             : ENSG00000142856.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ITGB3BP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ITGB3BPENSG00000142856.1666.1557.4661.81ENCSR000AEF
HepG2ITGB3BPENSG00000142856.1617.9941.5529.77ENCSR985KAT
K562ITGB3BPENSG00000142856.1693.5691.2492.40ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ITGB3BP is not avaliable on ENCORE database.



Proteins bound to RNA
  • ITGB3BP RNA is bound by 7 proteins.  







eCLIP assay for ITGB3BP is not avaliable on ENCORE database.





7 proteins are bound to ITGB3BP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr16390665163906691-3'-UTR,intron-Distal3.137084.39307K562PUM2
chr16390653563906571-3'-UTR,intron-Distal4.3535618.62108K562PUM2
chr16390657163906617-3'-UTR,intron-Distal3.517799.63268K562PUM2
chr16398879763988865-5'-UTR,CDS,intron-Distal,intron-Proximal3.357668.12116K562DDX3X
chr16392058263920640-CDS,intron-Distal,intron-Proximal4.387074.21675K562ZNF622
chr16395582463955888-CDS,intron-Distal,intron-Proximal3.032393.70975K562UCHL5
chr16392004963920147-CDS,intron-Distal,intron-Proximal3.747363.45225K562GRWD1
chr16392006863920147-CDS,intron-Distal,intron-Proximal3.509635.95375K562ZNF622
chr16397419863974242-CDS,intron-Distal,intron-Proximal4.153695.88953K562DDX3X
chr16391311463913188-intron-Distal,intron-Proximal4.015643.06150K562KHSRP
chr16394423163944333-intron-Distal4.977588.90415K562KHSRP
chr16391270663912789-intron-Distal,intron-Proximal4.591996.80456K562KHSRP
chr16391943463919552-intron-Distal,intron-Proximal5.056137.21051K562PRPF8
chr16396467763964799-intron-Distal3.831493.66668K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ITGB3BP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ITGB3BP is not available on ENCORE database.

  • 99 RBPs can affect the levels of ITGB3BP.  








The Knockdown/knockout RNA-Seq assay for ITGB3BP is not available on ENCORE database.





99 RBPs can affect the gene expression of ITGB3BP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ITGB3BPENSG00000142856.12208.95400280.39280-0.424302.298401.73460HepG2ACO1
ITGB3BPENSG00000142856.12182.04340281.66540-0.629704.122903.20000HepG2AKAP8L
ITGB3BPENSG00000142856.12192.69670290.42690-0.591802.767701.98340HepG2ASCC1
ITGB3BPENSG00000142856.12302.71580397.27800-0.392202.578601.91280HepG2AUH
ITGB3BPENSG00000142856.12132.78350248.10130-0.901903.987102.92600HepG2BCLAF1
ITGB3BPENSG00000142856.12149.39350208.61060-0.481701.807101.31400HepG2BOP1
ITGB3BPENSG00000142856.12246.13390392.19660-0.672105.141904.13000HepG2CALR
ITGB3BPENSG00000142856.12191.87090275.92180-0.524102.200501.50650HepG2CIRBP
ITGB3BPENSG00000142856.12137.62640280.27800-1.026109.475208.38890HepG2CKAP4
ITGB3BPENSG00000142856.1291.78830191.50840-1.061005.343304.41710HepG2CPSF6
ITGB3BPENSG00000142856.12300.98330470.22180-0.643706.349205.45160HepG2CELF1
ITGB3BPENSG00000142856.12384.88900505.72350-0.393902.349001.65760HepG2DAZAP1
ITGB3BPENSG00000142856.12188.52830268.07470-0.507902.511501.41240HepG2DDX1
ITGB3BPENSG00000142856.12161.65670274.12900-0.761904.474903.63390HepG2DDX21
ITGB3BPENSG00000142856.12220.96170336.24760-0.605703.075602.42090HepG2DDX3X
ITGB3BPENSG00000142856.12197.80890281.98960-0.511502.463801.50650HepG2DDX5
ITGB3BPENSG00000142856.12137.37720288.78410-1.071806.577805.65680HepG2DDX6
ITGB3BPENSG00000142856.12181.03170253.52970-0.485902.185501.31240HepG2DHX30
ITGB3BPENSG00000142856.12181.25080262.86950-0.536402.898502.18170HepG2DNAJC21
ITGB3BPENSG00000142856.12163.52740260.51540-0.671803.309402.60760HepG2DNAJC2
ITGB3BPENSG00000142856.12202.69870308.28570-0.604902.839701.90820HepG2EEF2
ITGB3BPENSG00000142856.1265.53460277.67430-2.0831018.7648017.31980HepG2EIF2S1
ITGB3BPENSG00000142856.12161.10860250.27540-0.635502.907401.98420HepG2EIF3D
ITGB3BPENSG00000142856.12192.66420298.74720-0.632802.512501.85540HepG2EIF4B
ITGB3BPENSG00000142856.12394.82710498.82420-0.337302.418101.62680HepG2EIF4G1
ITGB3BPENSG00000142856.12259.87910456.12000-0.811607.852906.92910HepG2ETF1
ITGB3BPENSG00000142856.12182.64330318.82330-0.803704.221303.28660HepG2FIP1L1
ITGB3BPENSG00000142856.12190.83040287.20220-0.589802.738502.07590HepG2G3BP1
ITGB3BPENSG00000142856.12142.16970217.06900-0.610502.326801.73690HepG2GPKOW
ITGB3BPENSG00000142856.12164.39040265.38750-0.691003.694802.96360HepG2HNRNPA1
ITGB3BPENSG00000142856.12193.14750295.18360-0.611903.098602.37030HepG2HNRNPC
ITGB3BPENSG00000142856.12176.38360264.73800-0.585803.346902.56340HepG2HNRNPF
ITGB3BPENSG00000142856.12183.42280290.71190-0.664403.360802.59420HepG2HNRNPK
ITGB3BPENSG00000142856.12324.99010460.71160-0.503504.745703.88000HepG2HNRNPL
ITGB3BPENSG00000142856.12101.89440207.15480-1.023605.228804.39320HepG2HNRNPLL
ITGB3BPENSG00000142856.12221.66850293.23280-0.403602.161201.61810HepG2HNRNPU
ITGB3BPENSG00000142856.12179.73680260.69330-0.536502.623301.91790HepG2IGF2BP1
ITGB3BPENSG00000142856.12130.06740291.95100-1.166508.268107.16560HepG2IGF2BP2
ITGB3BPENSG00000142856.12150.15580258.10400-0.781504.299103.30320HepG2MSI2
ITGB3BPENSG00000142856.12190.74580318.75570-0.740804.055503.29370HepG2NCBP2
ITGB3BPENSG00000142856.1288.21050188.16390-1.093004.656603.48360HepG2PABPC1
ITGB3BPENSG00000142856.12157.87320283.92540-0.846704.935303.98030HepG2PABPC4
ITGB3BPENSG00000142856.12213.31500338.56770-0.666503.224802.10530HepG2PCBP2
ITGB3BPENSG00000142856.1287.69200216.61390-1.304607.183905.95380HepG2PRPF8
ITGB3BPENSG00000142856.12170.51660265.36910-0.638104.014403.38210HepG2PTBP1
ITGB3BPENSG00000142856.12200.19820478.66190-1.2576015.4926014.23590HepG2PUF60
ITGB3BPENSG00000142856.12322.95460508.08190-0.653708.107607.20280HepG2PUM1
ITGB3BPENSG00000142856.12354.91130507.73490-0.516604.044503.23920HepG2PUM2
ITGB3BPENSG00000142856.12195.95170285.59030-0.543403.447002.77710HepG2PUS1
ITGB3BPENSG00000142856.12218.77990326.76210-0.578801.983501.37680HepG2RAVER1
ITGB3BPENSG00000142856.12357.08150275.041800.376501.862701.34240HepG2RECQL
ITGB3BPENSG00000142856.12131.53890285.16010-1.116308.276507.19400HepG2RPLP0
ITGB3BPENSG00000142856.12154.61160320.91360-1.053506.397005.00270HepG2RPS10
ITGB3BPENSG00000142856.12104.91550243.51420-1.214808.776007.75510HepG2RPS19
ITGB3BPENSG00000142856.12176.06280327.96840-0.897504.083103.11960HepG2RPS2
ITGB3BPENSG00000142856.12132.62900206.70310-0.640202.425101.67380HepG2RPS3A
ITGB3BPENSG00000142856.12102.69780214.28510-1.061104.841703.83430HepG2RRP9
ITGB3BPENSG00000142856.12146.45390244.42780-0.739003.752502.65560HepG2SERBP1
ITGB3BPENSG00000142856.12174.25220285.22600-0.710903.671802.89190HepG2SF3A3
ITGB3BPENSG00000142856.12194.06790276.32800-0.509802.764802.17290HepG2SF3B4
ITGB3BPENSG00000142856.12336.61600458.88230-0.447003.837503.03230HepG2SLBP
ITGB3BPENSG00000142856.12228.74880304.54800-0.412902.397701.79360HepG2SMN1
ITGB3BPENSG00000142856.12229.20020332.97860-0.538802.452201.55440HepG2SMNDC1
ITGB3BPENSG00000142856.12345.65110430.59250-0.317001.892501.45440HepG2SRFBP1
ITGB3BPENSG00000142856.12226.42900472.56230-1.0614014.4249013.15480HepG2SRSF5
ITGB3BPENSG00000142856.12147.81840260.09000-0.815205.555804.62630HepG2SRSF7
ITGB3BPENSG00000142856.12160.07450234.61990-0.551603.095602.51810HepG2SRSF9
ITGB3BPENSG00000142856.12229.84320373.86160-0.701904.459803.84020HepG2SSB
ITGB3BPENSG00000142856.12365.33840537.47340-0.557004.284403.54150HepG2SUCLG1
ITGB3BPENSG00000142856.12107.98890279.43830-1.371608.443707.36700HepG2SUPV3L1
ITGB3BPENSG00000142856.1285.03600201.96660-1.248007.323306.21950HepG2TARDBP
ITGB3BPENSG00000142856.12133.02960284.97140-1.099109.343608.52010HepG2TIAL1
ITGB3BPENSG00000142856.12154.52790287.47490-0.895607.542006.68800HepG2TRIM56
ITGB3BPENSG00000142856.12289.16660467.56890-0.693303.562202.55760HepG2TUFM
ITGB3BPENSG00000142856.12160.94910272.77200-0.761103.630202.91480HepG2U2AF1
ITGB3BPENSG00000142856.1289.31950253.00100-1.502104.446003.18450HepG2U2AF2
ITGB3BPENSG00000142856.12318.78480494.87260-0.634503.041702.16600HepG2UBE2L3
ITGB3BPENSG00000142856.12103.88840252.95060-1.2838011.7160010.45870HepG2UPF1
ITGB3BPENSG00000142856.12172.53770260.00740-0.591603.455602.29950HepG2UTP18
ITGB3BPENSG00000142856.12112.00850278.19900-1.3125014.0338013.04050HepG2ZNF622
ITGB3BPENSG00000142856.121083.020001349.91990-0.317802.486301.86680K562AKAP8L
ITGB3BPENSG00000142856.121136.344101655.01090-0.542406.039205.22950K562AQR
ITGB3BPENSG00000142856.121047.431501266.17400-0.273602.466001.42550K562CPEB4
ITGB3BPENSG00000142856.12687.84990905.39670-0.396503.244402.39390K562CPSF6
ITGB3BPENSG00000142856.12538.75550676.69770-0.328902.485001.49090K562CSTF2
ITGB3BPENSG00000142856.12541.93900752.65590-0.473904.175702.85670K562DDX3X
ITGB3BPENSG00000142856.121006.865501310.10460-0.379803.170402.47960K562DDX47
ITGB3BPENSG00000142856.12447.24570697.93390-0.642003.241602.24800K562EFTUD2
ITGB3BPENSG00000142856.12676.18730826.65560-0.289902.559801.40750K562EIF2S1
ITGB3BPENSG00000142856.12640.89150882.79660-0.462005.013303.95700K562EIF3G
ITGB3BPENSG00000142856.12556.44950708.09170-0.347702.848901.67260K562EIF4B
ITGB3BPENSG00000142856.12731.58800921.24500-0.332602.043901.30500K562FMR1
ITGB3BPENSG00000142856.121403.00930977.434600.521403.644502.80770K562G3BP2
ITGB3BPENSG00000142856.12601.13090864.42060-0.524104.746603.71090K562GPKOW
ITGB3BPENSG00000142856.121832.361601391.451200.397003.569902.66920K562HSPD1
ITGB3BPENSG00000142856.12535.08930738.13480-0.464102.463001.58730K562KRR1
ITGB3BPENSG00000142856.12889.622601146.24530-0.365702.687801.77970K562MATR3
ITGB3BPENSG00000142856.12582.57190843.77540-0.534404.876103.69370K562METAP2
ITGB3BPENSG00000142856.12837.39670988.89100-0.239902.310101.62220K562NSUN2
ITGB3BPENSG00000142856.121317.05530901.241500.547204.685903.60470K562PCBP3
ITGB3BPENSG00000142856.12991.10280691.303700.519605.782804.62890K562POLR2G
ITGB3BPENSG00000142856.12597.247101115.79100-0.9017010.603609.36200K562PTBP1
ITGB3BPENSG00000142856.12749.332301070.20940-0.514203.806802.80900K562RBM22
ITGB3BPENSG00000142856.12942.80530636.801500.566003.536001.88980K562SDAD1
ITGB3BPENSG00000142856.12802.98230975.77720-0.281202.350001.59270K562SF3A3
ITGB3BPENSG00000142856.12663.069201017.05550-0.617206.503205.15230K562SF3B4
ITGB3BPENSG00000142856.12870.989601093.78570-0.328602.325001.66960K562SRSF1
ITGB3BPENSG00000142856.12801.787001032.84610-0.365302.501001.50990K562SRSF5
ITGB3BPENSG00000142856.12846.159901107.11490-0.387802.142301.51500K562TARDBP
ITGB3BPENSG00000142856.12829.726501067.90260-0.364102.653301.85320K562TIA1
ITGB3BPENSG00000142856.12463.43510689.19560-0.572504.144502.97910K562TIAL1
ITGB3BPENSG00000142856.12565.83790732.13060-0.371702.419701.54530K562TRIM56
ITGB3BPENSG00000142856.12718.660001048.54170-0.545008.510307.33460K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ITGB3BP is not available on ENCORE database.





30 RBPs can affect the splicing of ITGB3BP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEITGB3BPENSG00000142856.12chr1-6391247663912527639064436390677463919588639196450.103000.000390.00977includedK562SRSF1
SEITGB3BPENSG00000142856.12chr1-639757356397585263974198639742416398879963988865-0.369000.000000.00000excludedK562SRSF1
SEITGB3BPENSG00000142856.12chr1-639124766391252763906443639067746391958863919645-0.154000.000350.01661excludedK562PRPF8
SEITGB3BPENSG00000142856.12chr1-639757356397585263974198639742416398879963988865-0.149000.002780.07884excludedK562PRPF8
SEITGB3BPENSG00000142856.12chr1-6397573563975852639741986397424163988799639888650.234000.000140.07024includedK562SMNDC1
SEITGB3BPENSG00000142856.12chr1-639444346394450463920560639206396397419863974241-0.212000.000370.02819excludedHepG2RBM22
SEITGB3BPENSG00000142856.12chr1-6397573563975852639741986397424163988799639888650.209000.002020.05389includedK562AKAP8L
SEITGB3BPENSG00000142856.12chr1-6391323563913285639124766391252763919588639196450.292000.004220.08418includedHepG2HNRNPK
SEITGB3BPENSG00000142856.12chr1-639757356397585263974198639742416398879963988865-0.135000.000840.05122excludedHepG2AKAP1
SEITGB3BPENSG00000142856.12chr1-639124766391252763906443639067746391958863919645-0.165000.000160.00254excludedK562AQR
SEITGB3BPENSG00000142856.12chr1-639557536395588963944434639445046397419863974241-0.059000.000060.00384excludedK562FXR1
SEITGB3BPENSG00000142856.12chr1-639757356397585263974198639742416398879963988865-0.274000.000020.00151excludedK562FXR1
SEITGB3BPENSG00000142856.12chr1-639124766391252763906443639067746391958863919645-0.066000.009100.09794excludedK562PUS1
SEITGB3BPENSG00000142856.12chr1-6391323563913285639124766391252763919588639196450.729000.000000.00036includedHepG2PTBP1
SEITGB3BPENSG00000142856.12chr1-639132356391328563912476639125276391958863919645-0.110000.000760.08691excludedK562LARP4
SEITGB3BPENSG00000142856.12chr1-639124766391252763906443639067746391958863919645-0.226000.000750.04143excludedK562EFTUD2
SEITGB3BPENSG00000142856.12chr1-6391323563913285639124766391252763919588639196450.326000.000040.00316includedHepG2MATR3
SEITGB3BPENSG00000142856.12chr1-639741986397424163955753639558896398879963988872-0.110000.000010.00057excludedK562U2AF1
SEITGB3BPENSG00000142856.12chr1-639444346394450463920560639206396397419863974241-0.107000.000340.05236excludedK562HNRNPM
SEITGB3BPENSG00000142856.12chr1-6391323563913285639124766391252763919588639196450.139000.000610.06337includedHepG2LARP4
SEITGB3BPENSG00000142856.12chr1-6391323563913285639124766391252763919588639196450.132000.000030.00410includedK562HNRNPL
SEITGB3BPENSG00000142856.12chr1-639444346394450463920560639206396397419863974241-0.093000.000390.03186excludedK562HNRNPL
SEITGB3BPENSG00000142856.12chr1-639124766391252763906443639067746391958863919645-0.134000.000000.00003excludedK562HNRNPL
SEITGB3BPENSG00000142856.12chr1-6391323563913285639124766391252763919588639196450.504000.000000.00000includedHepG2SRSF1
SEITGB3BPENSG00000142856.12chr1-639557536395588963944434639445046397419863974241-0.121000.001640.03793excludedHepG2SRSF1
SEITGB3BPENSG00000142856.12chr1-6394443463944504639205606392063963974198639742410.231000.000590.04634includedHepG2IGF2BP3
SEITGB3BPENSG00000142856.12chr1-6397573563975852639741986397424163988799639888650.239000.000110.02400includedK562SRSF7
SEITGB3BPENSG00000142856.12chr1-639124766391252763906443639067746391958863919645-0.168000.000000.00024excludedK562SRSF7
SEITGB3BPENSG00000142856.12chr1-639757356397585263974198639742416398879963988865-0.210000.000250.03909excludedK562RBM22
SEITGB3BPENSG00000142856.12chr1-639124766391252763906443639067746391958863919645-0.077000.003270.08178excludedK562UTP18
SEITGB3BPENSG00000142856.12chr1-639200506392014463919588639196456392056063920639-0.055000.000580.01277excludedK562U2AF2
SEITGB3BPENSG00000142856.12chr1-639557536395588963944434639445046397419863974241-0.069000.000280.01399excludedK562TARDBP
SEITGB3BPENSG00000142856.12chr1-639757356397585263974198639742416398879963988865-0.185000.001240.04442excludedK562TARDBP
SEITGB3BPENSG00000142856.12chr1-639124766391252763906443639067746391958863919645-0.107000.003070.08776excludedK562HNRNPU
SEITGB3BPENSG00000142856.12chr1-6397419863974241639557536395588963988799639888720.099000.000150.07161includedK562AARS
SEITGB3BPENSG00000142856.12chr1-6397573563975852639741986397424163988799639888650.161000.000070.01680includedK562ZC3H8
SEITGB3BPENSG00000142856.12chr1-6390876863908866639064436390677463912476639125270.058000.000020.00180includedK562HNRNPK
SEITGB3BPENSG00000142856.12chr1-639444346394450463920560639206396397419863974241-0.114000.000550.02856excludedK562HNRNPK
SEITGB3BPENSG00000142856.12chr1-639757356397585263974198639742416398879963988865-0.185000.002080.07791excludedK562HNRNPK
SEITGB3BPENSG00000142856.12chr1-639757356397585263974198639742416398879963988865-0.315000.000140.03960excludedHepG2FUS
SEITGB3BPENSG00000142856.12chr1-6391323563913285639124766391252763919588639196450.682000.000000.00000includedK562PTBP1
SEITGB3BPENSG00000142856.12chr1-639757356397585263974198639742416398879963988865-0.197000.003310.09705excludedK562PTBP1
A3SSITGB3BPENSG00000142856.12chr1-6397419863974338639741986397424163988799639888860.051000.000030.00032longerK562AQR
MXEITGB3BPENSG00000142856.12chr1-63944434639445046395575363955889639205606392063963974198639742410.210000.000070.002661includedK562DROSHA
MXEITGB3BPENSG00000142856.12chr1-6394443463944504639557536395588963923354639240446397419863974241-0.152000.004200.096992includedHepG2SF3A3
MXEITGB3BPENSG00000142856.12chr1-63944434639445046395575363955889639205606392063963974198639742410.125000.000220.011991includedK562SBDS
MXEITGB3BPENSG00000142856.12chr1-63944434639445046395575363955889639205606392063963974198639742410.111000.006550.097671includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ITGB3BP is not avaliable on ENCORE database.