IMPDH1

General Information

Gene Name       : IMPDH1
Gene ID             : ENSG00000106348.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: IMPDH1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878IMPDH1ENSG00000106348.176.6316.3111.47ENCSR000AEF
HepG2IMPDH1ENSG00000106348.1740.5814.4327.50ENCSR985KAT
K562IMPDH1ENSG00000106348.1755.1240.2247.67ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for IMPDH1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • IMPDH1 RNA is bound by 17 proteins.  







eCLIP assay for IMPDH1 is not avaliable on ENCORE database.





17 proteins are bound to IMPDH1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7128040105128040150-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.333024.49024K562AQR
chr7128040823128040932-3'-UTR,CDS,intron-Distal,intron-Proximal3.216826.71915K562PRPF8
chr7128038529128038572-3'-UTR,CDS,intron-Distal,intron-Proximal3.255783.69481K562UCHL5
chr7128036741128036821-3'-UTR,CDS,intron-Distal,intron-Proximal4.479974.38082K562SMNDC1
chr7128036734128036841-3'-UTR,CDS,intron-Distal,intron-Proximal4.1398811.51837K562EFTUD2
chr7128033075128033144-3'-UTR,CDS,intron-Distal5.0457818.10508K562SF3B4
chr7128035295128035350-3'-UTR,CDS,intron-Distal,intron-Proximal3.001214.71322K562BUD13
chr7128035281128035369-3'-UTR,CDS,intron-Distal,intron-Proximal4.112936.10653K562SF3B4
chr7128032485128032604-3'-UTR,intron-Distal4.514529.31157K562PCBP1
chr7128036730128036754-3'-UTR,CDS,intron-Distal,intron-Proximal4.215595.63851K562SF3B4
chr7128038429128038513-3'-UTR,CDS,intron-Distal,intron-Proximal5.120946.69228HepG2PRPF8
chr7128038654128038707-3'-UTR,CDS,intron-Distal,intron-Proximal4.112935.26108K562SF3B4
chr7128033060128033161-3'-UTR,CDS,intron-Distal3.454599.27256K562BUD13
chr7128045818128046005-5'-UTR,CDS,intron-Distal,intron-Proximal4.1418013.58160K562DDX3X
chr7128040826128040888-CDS,intron-Distal,intron-Proximal3.183716.12954HepG2PRPF8
chr7128040842128040872-CDS,intron-Distal,intron-Proximal3.490188.77060K562AQR
chr7128040948128041050-intron-Distal,intron-Proximal3.555084.13525K562RBFOX2
chr7128036594128036654-intron-Distal,intron-Proximal4.734829.46915K562AQR
chr7128040947128040999-intron-Distal,intron-Proximal4.8372210.52912K562SF3B4
chr7128043714128043758-intron-Distal,intron-Proximal4.973856.22530K562AQR
chr7128033618128033686-intron-Distal,intron-Proximal3.488534.63145K562BUD13
chr7128047101128047137-intron-Distal3.093053.50009K562CSTF2T
chr7128033109128033173-intron-Distal3.273503.31456K562TIA1
chr7128036757128036817-intron-Distal,intron-Proximal5.3706432.54456K562SF3B4
chr7128033600128033685-intron-Distal,intron-Proximal3.567465.75122K562DROSHA
chr7128034234128034306-intron-Distal,intron-Proximal3.9690611.18230K562EFTUD2
chr7128046300128046321-intron-Distal3.259863.37274K562AKAP8L
chr7128043823128043863-intron-Distal,intron-Proximal4.919425.90023K562SF3B4
chr7128034887128034934-intron-Distal,intron-Proximal4.065704.88100K562AQR
chr7128034236128034317-intron-Distal,intron-Proximal5.8949612.35153K562SF3B4
chr7128033519128033595-intron-Distal5.406639.11687K562PRPF8
chr7128034253128034331-intron-Distal,intron-Proximal4.032308.31368K562AQR
chr7128033587128033680-intron-Distal,intron-Proximal3.970298.90178K562SF3B4
chr7128048025128048092-intron-Distal4.243313.80314K562CSTF2T
chr7128034263128034304-intron-Distal,intron-Proximal4.160706.71940K562PRPF8
chr7128046254128046338-intron-Distal4.892019.80560K562DROSHA
chr7128036765128036822-intron-Distal,intron-Proximal3.119735.96307K562BUD13
chr7128040826128040842-intron-Distal,intron-Proximal3.874889.59600K562AQR
chr7128034934128034943-intron-Distal,intron-Proximal3.789924.41130K562AQR
chr7128033595128033672-intron-Distal4.7121010.08597K562PRPF8
chr7128040950128041013-intron-Distal,intron-Proximal3.610004.52919HepG2SF3B4
chr7128036758128036816-intron-Distal,intron-Proximal4.684658.08215HepG2EFTUD2
chr7128033616128033683-intron-Distal,intron-Proximal4.111493.67527K562SMNDC1
chr7128040952128041004-intron-Distal,intron-Proximal3.280533.51682HepG2RBFOX2
chr7128041004128041055-intron-Distal,intron-Proximal3.751084.51074HepG2RBFOX2
chr7128046509128046580-intron-Distal3.623415.79195K562CSTF2T
chr7128046267128046338-intron-Distal4.799155.85370K562CSTF2T
chr7128036816128036856-intron-Distal,intron-Proximal3.787883.28428HepG2EFTUD2
chr7128044292128044446-intron-Distal3.108163.19579K562HNRNPK
chr7128046259128046347-intron-Distal4.102613.30889K562GTF2F1
chr7128048726128048805-intron-Distal4.544645.80843K562CSTF2T
chr7128034234128034296-intron-Distal,intron-Proximal5.7576113.02333K562BUD13
chr7128033597128033683-intron-Distal,intron-Proximal3.829305.44329K562RBFOX2
chr7128036774128036890-intron-Distal,intron-Proximal4.761295.83981HepG2RBFOX2
chr7128033613128033688-intron-Distal,intron-Proximal3.625153.72797K562GTF2F1
chr7128046268128046331-intron-Distal4.258013.02711K562EWSR1
chr7128036749128036873-intron-Distal,intron-Proximal3.8608010.28843K562RBFOX2
chr7128046580128046646-intron-Distal4.544645.80843K562CSTF2T
chr7128033611128033682-intron-Distal,intron-Proximal3.076134.00731K562UCHL5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for IMPDH1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for IMPDH1 is not available on ENCORE database.

  • 113 RBPs can affect the levels of IMPDH1.  








The Knockdown/knockout RNA-Seq assay for IMPDH1 is not available on ENCORE database.





113 RBPs can affect the gene expression of IMPDH1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
IMPDH1ENSG00000106348.12597.39040969.09540-0.698006.138204.79590HepG2ABCF1
IMPDH1ENSG00000106348.121011.78170767.084700.399305.060304.28630HepG2ACO1
IMPDH1ENSG00000106348.121083.31960770.611200.491306.880705.72930HepG2AKAP8L
IMPDH1ENSG00000106348.12889.84450531.603500.743105.275403.97230HepG2BCCIP
IMPDH1ENSG00000106348.12463.83550635.92790-0.455202.074201.55070HepG2BOP1
IMPDH1ENSG00000106348.12254.57480569.77860-1.162302.459601.74280HepG2CNOT7
IMPDH1ENSG00000106348.12209.26030583.78710-1.480108.665207.50640HepG2CPSF6
IMPDH1ENSG00000106348.12626.68000396.372600.660807.337605.69750HepG2YBX3
IMPDH1ENSG00000106348.12148.33430328.26520-1.1460010.136108.29450HepG2CSTF2
IMPDH1ENSG00000106348.121120.44550669.390500.743107.598806.63180HepG2CELF1
IMPDH1ENSG00000106348.12995.22770719.639100.467707.384006.25740HepG2DAZAP1
IMPDH1ENSG00000106348.12548.80550396.916800.467403.030401.82390HepG2DDX1
IMPDH1ENSG00000106348.12279.53160457.91460-0.712105.867704.53960HepG2DDX24
IMPDH1ENSG00000106348.12199.87450488.99090-1.2907011.916609.55950HepG2DDX27
IMPDH1ENSG00000106348.12188.44040395.84130-1.070809.689607.34040HepG2DDX28
IMPDH1ENSG00000106348.121744.20890885.780500.9775011.5300010.33250HepG2DDX3X
IMPDH1ENSG00000106348.12821.14620644.156200.350102.230501.32030HepG2DDX5
IMPDH1ENSG00000106348.12499.94180733.86810-0.553806.411005.46100HepG2DKC1
IMPDH1ENSG00000106348.12780.94000389.195801.0046017.8588016.22600HepG2DNAJC21
IMPDH1ENSG00000106348.121202.09470787.237600.610602.410301.76730HepG2EIF4B
IMPDH1ENSG00000106348.12610.57570839.36750-0.459103.603002.36480HepG2ESF1
IMPDH1ENSG00000106348.12670.213801081.27730-0.6900012.7571011.62280HepG2ETF1
IMPDH1ENSG00000106348.12231.64640463.61790-1.001005.313503.80010HepG2FUS
IMPDH1ENSG00000106348.12280.85450452.59570-0.688402.779401.75880HepG2GNB2L1
IMPDH1ENSG00000106348.12255.88580445.06480-0.798503.296901.77220HepG2HLTF
IMPDH1ENSG00000106348.121142.33200766.938100.574703.149702.40540HepG2HNRNPK
IMPDH1ENSG00000106348.12543.23550655.49970-0.271001.872101.30340HepG2HNRNPL
IMPDH1ENSG00000106348.12642.13330434.171900.564506.654105.75020HepG2HNRNPU
IMPDH1ENSG00000106348.121006.67410694.567900.535303.495602.10890HepG2HSPD1
IMPDH1ENSG00000106348.121120.29930768.990000.542702.447201.80720HepG2IGF2BP2
IMPDH1ENSG00000106348.121131.62220820.765600.463302.017301.47380HepG2MATR3
IMPDH1ENSG00000106348.121214.68220840.016200.532002.873702.22900HepG2NCBP2
IMPDH1ENSG00000106348.12717.15570387.245600.888904.534003.61270HepG2PPIL4
IMPDH1ENSG00000106348.121454.77500681.226101.0945022.6757021.18810HepG2PUF60
IMPDH1ENSG00000106348.12870.92200723.190500.268102.755502.16360HepG2PUM1
IMPDH1ENSG00000106348.121144.81940722.638000.663702.598701.94810HepG2PUM2
IMPDH1ENSG00000106348.12459.16510781.31190-0.7669013.0154011.84900HepG2PUS1
IMPDH1ENSG00000106348.12438.11920826.96240-0.9165013.8364012.59420HepG2QKI
IMPDH1ENSG00000106348.12183.91630423.30660-1.202706.119105.09830HepG2RAVER1
IMPDH1ENSG00000106348.121082.18840903.737300.259902.033401.57090HepG2RBM22
IMPDH1ENSG00000106348.12457.09070750.53720-0.715407.850906.76570HepG2RBM25
IMPDH1ENSG00000106348.12573.79250849.80370-0.566606.709405.93020HepG2NELFE
IMPDH1ENSG00000106348.12613.85260791.50600-0.366703.263302.60110HepG2RECQL
IMPDH1ENSG00000106348.12632.04910416.715100.600904.633203.85930HepG2RPS19
IMPDH1ENSG00000106348.12688.39240503.430000.451302.742501.67360HepG2RPS5
IMPDH1ENSG00000106348.12579.57430398.661600.539702.458901.71400HepG2RRP9
IMPDH1ENSG00000106348.12962.17550386.645701.3152037.6329035.68320HepG2SAFB2
IMPDH1ENSG00000106348.12664.90170418.110800.669204.540503.35110HepG2SERBP1
IMPDH1ENSG00000106348.12942.40520653.269500.528608.520607.39620HepG2SLBP
IMPDH1ENSG00000106348.12810.38510450.888300.8457016.4158015.04910HepG2SMN1
IMPDH1ENSG00000106348.12416.69080695.41890-0.738904.378803.38590HepG2SNRNP70
IMPDH1ENSG00000106348.12684.780601020.71960-0.575909.084608.32090HepG2SRFBP1
IMPDH1ENSG00000106348.12542.36420829.79840-0.613507.938907.23440HepG2SRSF1
IMPDH1ENSG00000106348.12478.08380672.61500-0.492502.419501.49030HepG2SRSF3
IMPDH1ENSG00000106348.121056.72400672.658200.6516011.6548010.49490HepG2SRSF5
IMPDH1ENSG00000106348.12634.15490792.81740-0.322202.570601.89800HepG2SRSF7
IMPDH1ENSG00000106348.12515.12670886.19400-0.7827014.1452013.16610HepG2SSB
IMPDH1ENSG00000106348.12936.33990692.301300.435502.712101.44140HepG2SSRP1
IMPDH1ENSG00000106348.121025.12010764.957700.422205.938605.09010HepG2SUCLG1
IMPDH1ENSG00000106348.121032.05750700.666500.558603.584302.06050HepG2SUGP2
IMPDH1ENSG00000106348.12316.21970520.29560-0.718405.377304.48290HepG2SUPV3L1
IMPDH1ENSG00000106348.12362.26380745.89470-1.0419017.3489016.11770HepG2TAF15
IMPDH1ENSG00000106348.12165.25510348.70050-1.077308.179706.64540HepG2TFIP11
IMPDH1ENSG00000106348.12851.58570421.856701.013309.837308.99710HepG2TIAL1
IMPDH1ENSG00000106348.121003.45470425.651801.2371033.4210031.72970HepG2TRIM56
IMPDH1ENSG00000106348.121040.77380665.592600.644807.972406.36580HepG2TUFM
IMPDH1ENSG00000106348.12607.96470836.96380-0.461203.397202.70660HepG2U2AF1
IMPDH1ENSG00000106348.12345.78640476.27830-0.461902.390901.46380HepG2UPF2
IMPDH1ENSG00000106348.12489.30940697.41690-0.511305.209404.43050HepG2UTP3
IMPDH1ENSG00000106348.12255.12490521.45900-1.0313015.3838014.00710HepG2ZC3H8
IMPDH1ENSG00000106348.121067.46760794.465600.426006.392905.65110HepG2ZNF622
IMPDH1ENSG00000106348.121399.627601906.78350-0.446104.272602.72940K562ABCF1
IMPDH1ENSG00000106348.122650.803301578.277000.7480020.5687019.13550K562AGGF1
IMPDH1ENSG00000106348.122124.127801734.399300.292302.621101.67120K562AKAP8
IMPDH1ENSG00000106348.122413.125701642.296200.555107.701106.56190K562AKAP8L
IMPDH1ENSG00000106348.123035.700402467.024200.299202.778501.53680K562APOBEC3C
IMPDH1ENSG00000106348.121285.407002289.96720-0.8331012.0243010.92620K562AQR
IMPDH1ENSG00000106348.122179.804301723.215900.339004.633303.41680K562ATP5C1
IMPDH1ENSG00000106348.12592.18590915.82570-0.629005.772404.49870K562BOP1
IMPDH1ENSG00000106348.121032.19150785.413400.394103.077801.72020K562CIRBP
IMPDH1ENSG00000106348.12652.96400973.77660-0.576606.469605.26910K562CPSF6
IMPDH1ENSG00000106348.12831.056001073.47290-0.369304.403402.71600K562DDX27
IMPDH1ENSG00000106348.121564.594001175.716300.412104.354903.00630K562DDX3X
IMPDH1ENSG00000106348.122761.661702204.713400.324805.030604.18800K562DDX47
IMPDH1ENSG00000106348.121543.837501127.313200.453503.408101.51750K562DDX51
IMPDH1ENSG00000106348.121502.903801192.012700.334303.693202.12000K562DDX6
IMPDH1ENSG00000106348.122440.261801767.056400.465608.104206.46630K562DKC1
IMPDH1ENSG00000106348.12756.642501080.01740-0.513403.464902.02000K562EEF2
IMPDH1ENSG00000106348.121360.84000999.418000.445202.260801.36230K562EIF3A
IMPDH1ENSG00000106348.12910.44470490.660000.8917015.5376013.59010K562EIF3G
IMPDH1ENSG00000106348.121367.855401106.156700.306303.028001.80350K562EIF4B
IMPDH1ENSG00000106348.121352.722101072.190300.335203.557402.06530K562EWSR1
IMPDH1ENSG00000106348.12761.480101147.70160-0.591905.288303.63160K562FKBP4
IMPDH1ENSG00000106348.12260.03720433.81290-0.738405.610903.62180K562FUS
IMPDH1ENSG00000106348.121812.943701277.399200.505008.536807.54500K562FXR1
IMPDH1ENSG00000106348.12115.90970473.42580-2.030106.411505.23570K562G3BP2
IMPDH1ENSG00000106348.121310.192101929.57540-0.558509.737307.71400K562GLRX3
IMPDH1ENSG00000106348.12871.377001320.79520-0.600007.269306.34620K562HNRNPC
IMPDH1ENSG00000106348.121415.56460733.263200.948903.181902.05520K562IGF2BP2
IMPDH1ENSG00000106348.121309.06920770.182600.7652011.677709.86830K562MAGOH
IMPDH1ENSG00000106348.122256.919301668.357400.435804.967703.39150K562MAK16
IMPDH1ENSG00000106348.121086.95210768.552000.500005.358204.01680K562MATR3
IMPDH1ENSG00000106348.122456.247401952.379100.331103.784502.69230K562MBNL1
IMPDH1ENSG00000106348.121366.276401028.694100.409302.861701.54010K562NONO
IMPDH1ENSG00000106348.122004.834702254.05280-0.169002.256001.57600K562NSUN2
IMPDH1ENSG00000106348.121415.001002218.96760-0.649104.178902.63670K562PABPC1
IMPDH1ENSG00000106348.121097.46170753.062700.543203.727502.15150K562PCBP1
IMPDH1ENSG00000106348.12976.82810685.190000.511504.373203.13760K562PCBP2
IMPDH1ENSG00000106348.121058.843202072.32470-0.9688011.690509.98200K562PCBP3
IMPDH1ENSG00000106348.12949.868201589.46340-0.742709.551408.10280K562POLR2G
IMPDH1ENSG00000106348.121973.363701556.133200.342602.828301.99730K562PPIG
IMPDH1ENSG00000106348.121560.372501184.311400.397703.604402.55320K562PSIP1
IMPDH1ENSG00000106348.121893.54820748.314101.3393038.7992036.41630K562PTBP1
IMPDH1ENSG00000106348.122206.212301628.511200.437904.702004.01790K562PUS1
IMPDH1ENSG00000106348.122284.923101586.901200.525809.555708.47760K562RBM15
IMPDH1ENSG00000106348.121142.07010717.299100.670908.041806.51050K562RBM22
IMPDH1ENSG00000106348.121017.12380699.417100.540204.706702.73860K562RBM34
IMPDH1ENSG00000106348.121335.541101034.010300.369102.199401.47450K562RPS19
IMPDH1ENSG00000106348.121121.295301464.38690-0.385103.224601.65470K562SDAD1
IMPDH1ENSG00000106348.12605.16240884.21300-0.547103.972602.79430K562SF3B1
IMPDH1ENSG00000106348.121893.772502278.73930-0.267004.138003.01770K562SRPK2
IMPDH1ENSG00000106348.121606.58380733.647601.1307025.9360023.76970K562SRSF1
IMPDH1ENSG00000106348.121058.78590692.999400.611404.867303.40340K562SRSF5
IMPDH1ENSG00000106348.12759.62140982.68960-0.371502.378701.44050K562SUPV3L1
IMPDH1ENSG00000106348.121340.95670742.390900.852906.333205.22260K562TARDBP
IMPDH1ENSG00000106348.12532.58180895.99520-0.750507.867405.20320K562TFIP11
IMPDH1ENSG00000106348.121303.61930716.148300.8641011.8064010.00240K562TIA1
IMPDH1ENSG00000106348.121166.12300703.011100.730002.802201.70060K562TRA2A
IMPDH1ENSG00000106348.121517.401701210.537700.325902.547801.64680K562TRIM56
IMPDH1ENSG00000106348.121339.671702045.06370-0.610309.412807.75630K562WDR3
IMPDH1ENSG00000106348.122173.633702712.68410-0.319603.209801.80760K562WRN
IMPDH1ENSG00000106348.121374.366101059.518200.375302.609601.44670K562XRN2
IMPDH1ENSG00000106348.121779.222502579.97260-0.536106.354004.96010K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for IMPDH1 is not available on ENCORE database.





8 RBPs can affect the splicing of IMPDH1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEIMPDH1ENSG00000106348.12chr7-1280337751280337921280323301280330821280343311280344150.120000.000040.00308includedK562PRPF8
SEIMPDH1ENSG00000106348.12chr7-128040870128040945128040386128040593128041068128041170-0.105000.009100.08470excludedHepG2U2AF2
SEIMPDH1ENSG00000106348.12chr7-1280337751280338421280323301280330821280343311280344150.075000.000510.03119includedK562EFTUD2
SEIMPDH1ENSG00000106348.12chr7-128040870128040945128040386128040593128041068128041170-0.119000.000140.00977excludedHepG2SF3B4
A3SSIMPDH1ENSG00000106348.12chr7-1280401481280402581280401481280402361280403861280405900.180000.000000.00017longerK562U2AF2
A3SSIMPDH1ENSG00000106348.12chr7-1280401481280402581280401481280402361280403861280405900.117000.000050.00462longerK562SF3B4
A3SSIMPDH1ENSG00000106348.12chr7-1280401481280402581280401481280402361280403861280405900.065000.000000.00143longerK562HNRNPUL1
A3SSIMPDH1ENSG00000106348.12chr7-1280384671280387001280384671280386671280401481280402360.078000.000000.00000longerK562AQR
A3SSIMPDH1ENSG00000106348.12chr7-1280351841280354241280351841280353281280366531280367490.066000.006360.03567longerK562AQR
A3SSIMPDH1ENSG00000106348.12chr7-1280410681280412621280410681280411701280437591280438080.059000.000000.00000longerK562AQR
A3SSIMPDH1ENSG00000106348.12chr7-1280401481280402581280401481280402361280403861280405900.092000.000010.00006longerK562AQR
A3SSIMPDH1ENSG00000106348.12chr7-1280401481280402581280401481280402361280403861280405900.126000.001050.04765longerK562U2AF1
A5SSIMPDH1ENSG00000106348.12chr7-128036985128037076128037001128037076128036653128036749-0.068000.000830.06944shorterK562UTP18

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for IMPDH1 is not avaliable on ENCORE database.