DNAJC4

General Information

Gene Name       : DNAJC4
Gene ID             : ENSG00000110011.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DNAJC4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DNAJC4ENSG00000110011.137.5518.9113.23ENCSR000AEF
HepG2DNAJC4ENSG00000110011.1330.0520.3825.21ENCSR985KAT
K562DNAJC4ENSG00000110011.1327.0818.8522.96ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DNAJC4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DNAJC4 RNA is bound by 8 proteins.  







eCLIP assay for DNAJC4 is not avaliable on ENCORE database.





8 proteins are bound to DNAJC4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr116400134164001418+3'-UTR,CDS,intron-Proximal4.942345.65342K562AQR
chr116400152864001558+3'-UTR,CDS,intron-Proximal3.661853.01531K562YBX3
chr116399996264000039+3'-UTR,CDS,intron-Distal,intron-Proximal3.362374.48353K562LIN28B
chr116400140864001453+3'-UTR,CDS,intron-Proximal4.029383.89860HepG2PABPN1
chr116400000664000029+3'-UTR,CDS,intron-Distal3.035655.13250K562YBX3
chr116400149964001618+3'-UTR,CDS,intron-Proximal4.781005.01757K562IGF2BP2
chr116400017564000246+3'-UTR,CDS,intron-Distal,intron-Proximal4.643375.93935K562IGF2BP2
chr116399801763998148+3'-UTR,5'-UTR4.429607.63030HepG2DDX3X
chr116399824863998407+5'-UTR,CDS3.734587.08844K562PCBP1
chr116400033764000342+intron-Distal,intron-Proximal3.699633.04871K562AQR
chr116400037964000441+intron-Distal,intron-Proximal3.310833.93631K562AQR
chr116400037364000440+intron-Distal,intron-Proximal3.268775.03897K562PRPF8
chr116400034264000379+intron-Distal,intron-Proximal3.623634.41130K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DNAJC4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DNAJC4 is not available on ENCORE database.

  • 104 RBPs can affect the levels of DNAJC4.  








The Knockdown/knockout RNA-Seq assay for DNAJC4 is not available on ENCORE database.





104 RBPs can affect the gene expression of DNAJC4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DNAJC4ENSG00000110011.9459.68440719.10310-0.645602.247101.76330HepG2AKAP1
DNAJC4ENSG00000110011.9666.02510525.756200.341102.825202.13280HepG2AUH
DNAJC4ENSG00000110011.9279.16050183.459500.605502.224701.41870HepG2BCLAF1
DNAJC4ENSG00000110011.9465.90600341.354900.448703.084502.41310HepG2CELF1
DNAJC4ENSG00000110011.9536.75650367.102300.548005.465804.47170HepG2DAZAP1
DNAJC4ENSG00000110011.9319.56240207.648100.621902.269401.56280HepG2DDX55
DNAJC4ENSG00000110011.9302.07580190.268900.666804.063802.89050HepG2DHX30
DNAJC4ENSG00000110011.9332.19030197.267000.751806.025705.02040HepG2DNAJC21
DNAJC4ENSG00000110011.9398.15580195.546501.0257013.3486012.02430HepG2DNAJC2
DNAJC4ENSG00000110011.9365.13790612.08470-0.745302.799302.10660HepG2EIF4B
DNAJC4ENSG00000110011.9731.22670346.893101.0757013.4948011.78840HepG2EIF4G2
DNAJC4ENSG00000110011.9543.96280385.654800.496102.725702.08890HepG2GPKOW
DNAJC4ENSG00000110011.9385.36550221.532500.798601.903201.31620HepG2HNRNPC
DNAJC4ENSG00000110011.9430.84000293.555700.553404.311803.43760HepG2HNRNPF
DNAJC4ENSG00000110011.9905.05780596.274200.601903.558202.77220HepG2HNRNPK
DNAJC4ENSG00000110011.9557.56540368.039900.599203.534502.83310HepG2HNRNPLL
DNAJC4ENSG00000110011.9325.34290481.09880-0.564403.924802.81110HepG2HNRNPM
DNAJC4ENSG00000110011.9325.67240220.067400.565404.047403.32520HepG2HNRNPU
DNAJC4ENSG00000110011.9513.37570289.066000.828508.404807.20660HepG2IGF2BP1
DNAJC4ENSG00000110011.9339.44270597.90760-0.816803.292102.56150HepG2IGF2BP2
DNAJC4ENSG00000110011.9280.54040561.45860-1.001002.699001.72760HepG2IGF2BP3
DNAJC4ENSG00000110011.9333.35010224.790300.568404.529003.61010HepG2ILF2
DNAJC4ENSG00000110011.9410.43190638.14790-0.636702.005201.46350HepG2MATR3
DNAJC4ENSG00000110011.9441.21120221.342200.995106.166804.04800HepG2NOLC1
DNAJC4ENSG00000110011.9340.79100146.495901.217903.477601.42020HepG2NUFIP2
DNAJC4ENSG00000110011.9308.24960217.820100.500903.019802.13880HepG2PARN
DNAJC4ENSG00000110011.9422.66620632.48820-0.581506.537305.66560HepG2PCBP1
DNAJC4ENSG00000110011.9478.79040196.281301.2864019.3351017.51980HepG2PPIL4
DNAJC4ENSG00000110011.9383.60690643.57470-0.7465010.200209.27820HepG2PTBP1
DNAJC4ENSG00000110011.9494.27960347.466600.508403.268402.62790HepG2PUF60
DNAJC4ENSG00000110011.9509.10160697.01940-0.453203.856903.13560HepG2QKI
DNAJC4ENSG00000110011.993.21590249.41570-1.419902.599001.91520HepG2RAVER1
DNAJC4ENSG00000110011.9331.02240211.402900.646803.148401.32850HepG2RBM14
DNAJC4ENSG00000110011.9360.25050504.55010-0.486003.827403.24390HepG2RBM22
DNAJC4ENSG00000110011.9303.22460632.58540-1.0609014.0232012.57210HepG2RBM25
DNAJC4ENSG00000110011.9436.76210716.24160-0.713609.175208.29350HepG2NELFE
DNAJC4ENSG00000110011.9465.49960667.07310-0.519105.293804.47510HepG2RECQL
DNAJC4ENSG00000110011.9494.31220195.975501.3346022.5874020.99310HepG2SAFB2
DNAJC4ENSG00000110011.9603.56820333.124900.857409.593308.41200HepG2SLBP
DNAJC4ENSG00000110011.9328.43480228.533500.523103.636102.91540HepG2SMN1
DNAJC4ENSG00000110011.9362.20160127.350301.507905.581403.53880HepG2SNRNP200
DNAJC4ENSG00000110011.9272.38070405.32130-0.573402.421301.69200HepG2SNRNP70
DNAJC4ENSG00000110011.9183.67260699.38770-1.9290046.2220044.80020HepG2SRSF1
DNAJC4ENSG00000110011.9244.16260392.00100-0.683003.535802.39150HepG2SRSF3
DNAJC4ENSG00000110011.9459.34380288.417600.671306.417505.42880HepG2SRSF7
DNAJC4ENSG00000110011.9262.89430568.98560-1.1139018.6408017.44100HepG2SRSF9
DNAJC4ENSG00000110011.9626.35700470.776300.411802.144001.30960HepG2SUPT6H
DNAJC4ENSG00000110011.9313.00620628.62540-1.0060014.4776013.34320HepG2TAF15
DNAJC4ENSG00000110011.9567.66900358.795500.661805.228904.27680HepG2TARDBP
DNAJC4ENSG00000110011.9454.13470577.63340-0.347002.333101.56310HepG2TIA1
DNAJC4ENSG00000110011.9446.91690213.809901.0636012.3735011.44800HepG2TIAL1
DNAJC4ENSG00000110011.9431.01120215.749800.9983012.6934011.61200HepG2TRIM56
DNAJC4ENSG00000110011.9481.49920339.427200.504302.202301.42910HepG2TUFM
DNAJC4ENSG00000110011.9417.14130596.54230-0.516103.349102.66360HepG2U2AF1
DNAJC4ENSG00000110011.9378.11800148.104101.352104.247603.01190HepG2U2AF2
DNAJC4ENSG00000110011.9587.63630359.256700.709802.883202.03050HepG2UBE2L3
DNAJC4ENSG00000110011.9344.21490515.51360-0.582705.078004.30780HepG2UTP3
DNAJC4ENSG00000110011.9384.44100203.456300.917905.367704.36810HepG2XRN2
DNAJC4ENSG00000110011.9576.89100407.525000.501303.408402.03060K562ABCF1
DNAJC4ENSG00000110011.91131.94010799.388200.501707.307106.44890K562AGGF1
DNAJC4ENSG00000110011.91113.77530878.428500.342402.721401.74910K562AKAP8
DNAJC4ENSG00000110011.91180.41930831.805000.504902.966102.28900K562AKAP8L
DNAJC4ENSG00000110011.91064.01760872.773700.285702.529701.65810K562ATP5C1
DNAJC4ENSG00000110011.9389.84410251.209400.633904.883603.58860K562BCLAF1
DNAJC4ENSG00000110011.9454.43430287.541800.660204.336103.23650K562BOP1
DNAJC4ENSG00000110011.9534.52680362.894100.558603.158302.01510K562CCAR1
DNAJC4ENSG00000110011.91182.39890955.295400.307602.706701.54640K562CCDC124
DNAJC4ENSG00000110011.9456.96870305.719400.579804.217403.24800K562CPSF6
DNAJC4ENSG00000110011.9291.11860190.579800.611103.457402.25520K562CSTF2
DNAJC4ENSG00000110011.9672.16560491.852700.450504.415102.86000K562DDX21
DNAJC4ENSG00000110011.9554.21900380.339400.543104.577603.18850K562DDX3X
DNAJC4ENSG00000110011.9373.21810587.76030-0.655206.526805.58540K562DDX47
DNAJC4ENSG00000110011.9555.92020417.814900.411903.508002.13020K562EIF2S1
DNAJC4ENSG00000110011.9544.60970335.059700.700706.290405.27050K562EIF2S2
DNAJC4ENSG00000110011.9886.98260688.734900.364903.208402.19980K562EIF4G2
DNAJC4ENSG00000110011.9561.62600422.036000.412102.832001.55140K562EXOSC5
DNAJC4ENSG00000110011.9551.11300292.997400.911409.599107.91270K562FIP1L1
DNAJC4ENSG00000110011.9230.38400413.25880-0.843008.077507.11190K562FXR1
DNAJC4ENSG00000110011.938.34910143.56540-1.904406.205605.05330K562G3BP2
DNAJC4ENSG00000110011.9473.15840291.870800.696905.381404.28070K562GPKOW
DNAJC4ENSG00000110011.9617.74100446.460600.468403.247202.43080K562GRSF1
DNAJC4ENSG00000110011.9405.55060531.21480-0.389402.277001.32810K562HNRNPL
DNAJC4ENSG00000110011.9558.23950397.200600.490903.291502.42590K562HSPD1
DNAJC4ENSG00000110011.91148.14440845.009100.442204.030702.65900K562MAK16
DNAJC4ENSG00000110011.9398.78880284.905200.485002.773501.89600K562METAP2
DNAJC4ENSG00000110011.9359.26150205.153900.808204.202402.52290K562NONO
DNAJC4ENSG00000110011.9758.74740579.216100.389404.209403.31020K562NSUN2
DNAJC4ENSG00000110011.9992.82710400.080001.311207.259705.39260K562PABPN1
DNAJC4ENSG00000110011.9562.28740332.652900.757204.979403.82640K562PPIG
DNAJC4ENSG00000110011.91034.53410475.436901.121604.494302.47010K562PPP1R8
DNAJC4ENSG00000110011.9486.30360353.698900.459202.681201.79360K562PSIP1
DNAJC4ENSG00000110011.9979.93080783.135100.323302.573701.64550K562PUM2
DNAJC4ENSG00000110011.91165.13840824.884200.498102.323101.81620K562PUS1
DNAJC4ENSG00000110011.91108.45640803.757000.463605.474204.66490K562RBM15
DNAJC4ENSG00000110011.9433.99170322.869900.426602.403601.48360K562RCC2
DNAJC4ENSG00000110011.9732.46840571.548600.357802.880602.05150K562SF3A3
DNAJC4ENSG00000110011.9860.99360445.717000.949803.414501.91080K562SFPQ
DNAJC4ENSG00000110011.9442.16580306.054900.530703.229902.10160K562SRFBP1
DNAJC4ENSG00000110011.9535.10840384.741200.475802.387701.41980K562SRSF4
DNAJC4ENSG00000110011.9391.36390217.072300.850204.387303.01530K562SRSF5
DNAJC4ENSG00000110011.9577.70190438.853100.396503.472002.15040K562SRSF7
DNAJC4ENSG00000110011.9289.03980413.01950-0.514902.630001.83210K562SYNCRIP
DNAJC4ENSG00000110011.9435.67220232.426700.906403.199302.43910K562TARDBP
DNAJC4ENSG00000110011.9442.86600224.224400.981806.473005.14390K562TIA1
DNAJC4ENSG00000110011.9569.00040340.179100.742005.802004.39660K562TIAL1
DNAJC4ENSG00000110011.9352.55770220.235200.678702.609801.55330K562TRA2A
DNAJC4ENSG00000110011.9587.10830361.580900.699203.871502.71570K562TRIM56
DNAJC4ENSG00000110011.9503.60490342.584100.555703.750702.06910K562TRIP6
DNAJC4ENSG00000110011.9862.86450692.689200.316802.754301.48900K562TROVE2
DNAJC4ENSG00000110011.9980.95020614.155700.6755011.3552010.02310K562UPF1
DNAJC4ENSG00000110011.9786.64430525.512700.581905.919604.61430K562WDR3
DNAJC4ENSG00000110011.9364.48690211.172000.787304.793203.04110K562XRN2
DNAJC4ENSG00000110011.9782.97010591.069400.405502.994402.09160K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DNAJC4 is not available on ENCORE database.





21 RBPs can affect the splicing of DNAJC4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDNAJC4ENSG00000110011.9chr11+639985036399861963998123639984126399934263999436-0.061000.006190.07314excludedK562PUS1
SEDNAJC4ENSG00000110011.9chr11+639993426399943663997903639984126400136564001656-0.325000.000290.01616excludedHepG2MATR3
SEDNAJC4ENSG00000110011.9chr11+639985036399861963998123639984126399934263999436-0.198000.000050.04043excludedK562PUM2
SEDNAJC4ENSG00000110011.9chr11+639985036399861963998123639984126399934263999436-0.215000.000100.02520excludedK562EIF4G2
SEDNAJC4ENSG00000110011.9chr11+639985036399861963998123639984126399934263999436-0.083000.000680.02566excludedK562UTP18
SEDNAJC4ENSG00000110011.9chr11+639985036399861963998123639984126399934263999436-0.073000.001880.04401excludedK562RBM15
SEDNAJC4ENSG00000110011.9chr11+639999016400008663999342639994366400017564000184-0.069000.002830.04457excludedK562HNRNPC
RIDNAJC4ENSG00000110011.9chr11+640013656400175364001365640014526400154464001753-0.192000.001080.04624excludedHepG2AKAP1
RIDNAJC4ENSG00000110011.9chr11+6400136564001753640013656400145264001544640017530.252000.002590.04692includedHepG2PCBP2
RIDNAJC4ENSG00000110011.9chr11+6400137864001619640013786400145264001544640016190.167000.003180.03909includedHepG2PCBP1
RIDNAJC4ENSG00000110011.9chr11+640013656400175364001365640014526400154464001753-0.402000.000040.00165excludedK562RBM22
RIDNAJC4ENSG00000110011.9chr11+6400136564001753640013656400145264001544640017530.175000.000200.00358includedHepG2HNRNPK
RIDNAJC4ENSG00000110011.9chr11+6400137564001619640013756400145264001544640016190.133000.015370.07813includedK562AQR
RIDNAJC4ENSG00000110011.9chr11+640013656400175364001365640014526400154464001753-0.283000.000880.03442excludedK562TARDBP
RIDNAJC4ENSG00000110011.9chr11+640013656400175364001365640014526400154464001753-0.275000.002010.03695excludedK562PTBP1
MXEDNAJC4ENSG00000110011.9chr11+63999901640000256400017264000337639993426399943664001365640017530.216000.001300.039641includedK562UCHL5
MXEDNAJC4ENSG00000110011.9chr11+63999901640000866400017264000337639993426399943664001365640017530.166000.001360.048531includedK562LIN28B
MXEDNAJC4ENSG00000110011.9chr11+63999901640000866400017564000337639993426399943664001365640014520.163000.001290.046631includedK562LIN28B
MXEDNAJC4ENSG00000110011.9chr11+6399998164000086640001756400033763999363639994366400136564001452-0.130000.000470.076662includedHepG2IGF2BP1
MXEDNAJC4ENSG00000110011.9chr11+63999342639994366399990164000086639979036399841264000175640003370.142000.000020.004771includedK562RBFOX2
MXEDNAJC4ENSG00000110011.9chr11+6399990164000086640001726400033763999342639994366400136564001753-0.191000.000760.029092includedK562DDX55
MXEDNAJC4ENSG00000110011.9chr11+6399990164000086640001756400033763999342639994366400136564001452-0.198000.000500.022112includedK562DDX55
MXEDNAJC4ENSG00000110011.9chr11+63999342639994366399990164000086639979036399841264000175640003370.112000.000370.016481includedK562DHX30

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DNAJC4 is not avaliable on ENCORE database.