CEP78

General Information

Gene Name       : CEP78
Gene ID             : ENSG00000148019.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CEP78)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CEP78ENSG00000148019.1319.2918.8719.08ENCSR000AEF
HepG2CEP78ENSG00000148019.1310.0521.6415.85ENCSR985KAT
K562CEP78ENSG00000148019.1311.1413.5612.35ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CEP78 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CEP78 RNA is bound by 6 proteins.  







eCLIP assay for CEP78 is not avaliable on ENCORE database.





6 proteins are bound to CEP78 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr98087906580879144+CDS,intron-Distal,intron-Proximal3.791075.06180HepG2BCLAF1
chr98086367780863748+CDS,intron-Distal,intron-Proximal3.513064.06757K562UCHL5
chr98086320480863272+CDS,intron-Distal,intron-Proximal4.698864.78529HepG2BCLAF1
chr98087781980877901+CDS,intron-Distal,intron-Proximal5.134606.37937HepG2BCLAF1
chr98087782280877903+CDS,intron-Distal,intron-Proximal4.059623.71613K562UCHL5
chr98086665780866759+intron-Distal,intron-Proximal4.821846.41859K562DGCR8
chr98086418480864277+intron-Distal3.263106.80591K562U2AF2
chr98086379180863865+intron-Distal,intron-Proximal3.280235.96041K562KHSRP
chr98086665680866706+intron-Distal3.931034.10688K562KHSRP
chr98086421080864269+intron-Distal3.207303.28806K562KHSRP
chr98086386180863985+intron-Distal,intron-Proximal4.480724.02395HepG2KHSRP
chr98086637080866441+intron-Distal4.143944.37030K562KHSRP
chr98086441080864468+intron-Distal3.290804.52210K562KHSRP
chr98086650680866574+intron-Distal3.019014.83983K562KHSRP
chr98086404780864173+intron-Distal3.954687.42482K562KHSRP
chr98086418580864272+intron-Distal4.8439010.75098HepG2U2AF2
chr98086380080863849+intron-Distal,intron-Proximal5.116518.11176K562TIA1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CEP78 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CEP78 is not available on ENCORE database.

  • 103 RBPs can affect the levels of CEP78.  








The Knockdown/knockout RNA-Seq assay for CEP78 is not available on ENCORE database.





103 RBPs can affect the gene expression of CEP78 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CEP78ENSG00000148019.8466.53770797.39280-0.7733013.4081012.28140HepG2ACO1
CEP78ENSG00000148019.8508.68790801.22620-0.655409.396908.08600HepG2AKAP8L
CEP78ENSG00000148019.8262.59950589.52660-1.166703.575902.68560HepG2ASCC1
CEP78ENSG00000148019.8857.808101045.88750-0.286002.504401.84540HepG2AUH
CEP78ENSG00000148019.8308.43930680.76940-1.142204.038302.97140HepG2BCLAF1
CEP78ENSG00000148019.8422.36070816.74050-0.9514012.1832011.04790HepG2BOP1
CEP78ENSG00000148019.8469.13860718.28620-0.614506.269205.16910HepG2CALR
CEP78ENSG00000148019.8331.50770797.32410-1.2661031.9175030.21470HepG2CKAP4
CEP78ENSG00000148019.8357.36990749.80350-1.0691013.3696011.98760HepG2CPSF6
CEP78ENSG00000148019.8428.04380598.61970-0.483903.544202.29580HepG2CPSF7
CEP78ENSG00000148019.8573.57220913.62080-0.6716010.091609.01210HepG2CELF1
CEP78ENSG00000148019.8648.14480982.43820-0.6001010.664309.35730HepG2DAZAP1
CEP78ENSG00000148019.8357.10800649.59750-0.863205.133104.23730HepG2DDX21
CEP78ENSG00000148019.8386.74830682.56850-0.819601.982901.44450HepG2DDX3X
CEP78ENSG00000148019.8370.58810770.06760-1.055203.576302.71130HepG2DDX55
CEP78ENSG00000148019.8547.86470851.45990-0.636102.237501.36140HepG2DDX59
CEP78ENSG00000148019.8196.76110586.05490-1.574605.382504.54730HepG2DDX6
CEP78ENSG00000148019.8279.15570522.45270-0.9042011.222409.88490HepG2DNAJC21
CEP78ENSG00000148019.8329.49350517.77230-0.652107.863606.83580HepG2DNAJC2
CEP78ENSG00000148019.8367.69960508.21640-0.466902.741801.63780HepG2EFTUD2
CEP78ENSG00000148019.8392.49380597.77190-0.606903.856402.53700HepG2AGO1
CEP78ENSG00000148019.8227.46020563.67220-1.309204.021903.31620HepG2EIF2S1
CEP78ENSG00000148019.8317.95800494.87860-0.638204.307503.19760HepG2EIF3D
CEP78ENSG00000148019.8609.08900928.41770-0.608105.926404.75610HepG2EIF4G2
CEP78ENSG00000148019.8807.782201200.75790-0.571905.834805.01540HepG2ETF1
CEP78ENSG00000148019.8466.71670618.78680-0.406902.364501.30310HepG2FASTKD2
CEP78ENSG00000148019.8500.24140678.29150-0.439302.505601.54230HepG2GNB2L1
CEP78ENSG00000148019.8358.90560849.93660-1.2438015.8740014.46090HepG2GPKOW
CEP78ENSG00000148019.8550.18190761.34530-0.468605.423104.10330HepG2HDGF
CEP78ENSG00000148019.8278.48180527.45720-0.921509.049707.97990HepG2HNRNPA1
CEP78ENSG00000148019.8687.83340902.85440-0.392404.114703.00940HepG2HNRNPA2B1
CEP78ENSG00000148019.8385.80500586.67630-0.604704.657003.77260HepG2HNRNPC
CEP78ENSG00000148019.8463.20990695.29240-0.586006.653205.60580HepG2HNRNPF
CEP78ENSG00000148019.8587.53390894.94780-0.6071010.200808.98430HepG2HNRNPL
CEP78ENSG00000148019.8464.39080811.11240-0.804608.138407.12240HepG2HNRNPLL
CEP78ENSG00000148019.8475.05510684.67020-0.527304.636203.72030HepG2IGF2BP1
CEP78ENSG00000148019.8318.79820592.67580-0.894602.533101.88470HepG2IGF2BP2
CEP78ENSG00000148019.8465.57180595.31390-0.354603.306202.51110HepG2ILF2
CEP78ENSG00000148019.8439.85300728.98210-0.7289012.0254010.07070HepG2KIF1C
CEP78ENSG00000148019.8344.37070517.93940-0.588802.250601.30110HepG2METAP2
CEP78ENSG00000148019.8449.80730594.04580-0.401302.538201.76180HepG2MSI2
CEP78ENSG00000148019.8745.77620974.17990-0.385403.769702.87750HepG2NOL12
CEP78ENSG00000148019.8554.47840719.22370-0.375302.237201.56220HepG2NSUN2
CEP78ENSG00000148019.875.70950272.47490-1.847606.758705.32950HepG2PABPC1
CEP78ENSG00000148019.8303.46750576.42340-0.925602.577601.87810HepG2PABPC4
CEP78ENSG00000148019.8400.40260576.89930-0.526905.155504.04670HepG2PARN
CEP78ENSG00000148019.8419.67480782.93700-0.899607.057905.47100HepG2PCBP2
CEP78ENSG00000148019.8398.81250519.81420-0.382302.755202.01920HepG2PPIL4
CEP78ENSG00000148019.81178.53110823.079300.517802.877301.63530HepG2PRPF6
CEP78ENSG00000148019.8202.62690594.45550-1.552706.285405.12050HepG2PRPF8
CEP78ENSG00000148019.8522.77860929.92010-0.8309011.2088010.11730HepG2PUF60
CEP78ENSG00000148019.8718.75830987.12790-0.457707.081006.22150HepG2PUM1
CEP78ENSG00000148019.8673.25290986.42140-0.551106.446605.43880HepG2PUM2
CEP78ENSG00000148019.8550.75240812.21160-0.560507.781706.83510HepG2PUS1
CEP78ENSG00000148019.8391.03100755.61010-0.950405.914004.90980HepG2RAVER1
CEP78ENSG00000148019.8579.98040904.37540-0.640907.978806.62780HepG2RBM15
CEP78ENSG00000148019.8771.473401003.62410-0.379503.759703.17990HepG2RBM22
CEP78ENSG00000148019.8402.95600650.67270-0.691304.801103.39500HepG2RCC2
CEP78ENSG00000148019.8951.78630649.297600.551707.078706.28290HepG2NELFE
CEP78ENSG00000148019.8934.08400604.722100.627209.017808.00180HepG2RECQL
CEP78ENSG00000148019.8391.73800748.91530-0.9349011.203009.98870HepG2RPLP0
CEP78ENSG00000148019.8451.47750742.13410-0.717004.544603.34160HepG2RPS10
CEP78ENSG00000148019.8299.65230481.53460-0.684405.568704.73040HepG2RPS19
CEP78ENSG00000148019.8567.10560738.99780-0.382002.305801.57170HepG2RPS2
CEP78ENSG00000148019.8223.21370588.07990-1.397605.471604.40160HepG2RRP9
CEP78ENSG00000148019.8361.37210519.02160-0.522305.002904.18100HepG2SAFB2
CEP78ENSG00000148019.8710.56050924.36400-0.379502.031701.45290HepG2SF3A3
CEP78ENSG00000148019.8472.22280802.82710-0.765608.099406.95110HepG2SF3B1
CEP78ENSG00000148019.8493.00440607.42930-0.301102.055201.53420HepG2SF3B4
CEP78ENSG00000148019.8730.89420891.60060-0.286702.827902.11860HepG2SLBP
CEP78ENSG00000148019.8399.21300605.28900-0.600507.480606.50180HepG2SMN1
CEP78ENSG00000148019.8531.87920770.12660-0.534003.188102.15270HepG2SMNDC1
CEP78ENSG00000148019.8364.13570748.40110-1.039303.464201.95990HepG2SNRNP200
CEP78ENSG00000148019.8435.32010893.29090-1.037108.431407.07050HepG2SNRNP70
CEP78ENSG00000148019.8492.799201133.57900-1.2018034.0871032.84140HepG2SRFBP1
CEP78ENSG00000148019.81182.52500634.019600.8992019.5742018.55770HepG2SRSF1
CEP78ENSG00000148019.8614.20750918.13270-0.580008.295107.28720HepG2SRSF5
CEP78ENSG00000148019.8420.62460683.08220-0.699509.068707.93570HepG2SRSF7
CEP78ENSG00000148019.8274.64380515.80440-0.9093012.4850011.46130HepG2SRSF9
CEP78ENSG00000148019.8333.86350490.25700-0.554303.483502.10540HepG2STAU1
CEP78ENSG00000148019.8329.74430495.62680-0.587904.492603.30940HepG2SUPT6H
CEP78ENSG00000148019.8206.23590766.70950-1.894407.842906.79840HepG2SUPV3L1
CEP78ENSG00000148019.8907.59000569.867500.671309.194108.26760HepG2TAF15
CEP78ENSG00000148019.8331.04760790.64720-1.2560018.3769016.80440HepG2TARDBP
CEP78ENSG00000148019.8522.02620341.639800.611502.304901.33010HepG2TBRG4
CEP78ENSG00000148019.8249.71200513.97110-1.041403.687602.55710HepG2TFIP11
CEP78ENSG00000148019.8217.87540566.38170-1.3783021.8746020.71790HepG2TIAL1
CEP78ENSG00000148019.8279.89220571.35530-1.0295014.9729013.80990HepG2TRIM56
CEP78ENSG00000148019.8456.91500627.89130-0.458602.907902.26470HepG2U2AF1
CEP78ENSG00000148019.8268.17940871.40700-1.700107.215305.54520HepG2U2AF2
CEP78ENSG00000148019.8744.62460961.55980-0.368902.225401.47920HepG2UBE2L3
CEP78ENSG00000148019.8390.60890819.76550-1.0695020.0306018.48970HepG2UPF1
CEP78ENSG00000148019.8703.10700514.127400.451504.872204.02300HepG2ZC3H8
CEP78ENSG00000148019.8392.23520901.59090-1.2008022.1139020.93010HepG2ZNF622
CEP78ENSG00000148019.8615.42940773.69130-0.330202.209101.34130K562AKAP8
CEP78ENSG00000148019.8757.270801032.51320-0.447303.422302.78430K562AQR
CEP78ENSG00000148019.8487.21120621.24890-0.350602.607201.67840K562BCLAF1
CEP78ENSG00000148019.8670.32410841.50850-0.328102.581001.45350K562CCDC124
CEP78ENSG00000148019.8346.90880461.72370-0.412502.359701.62950K562CPSF6
CEP78ENSG00000148019.8648.48310788.46980-0.282002.220201.44660K562DKC1
CEP78ENSG00000148019.8334.84770509.63950-0.606002.177801.36740K562EFTUD2
CEP78ENSG00000148019.8437.52600568.58770-0.378003.042101.76160K562EIF2S1
CEP78ENSG00000148019.8347.61570545.84290-0.651002.250301.32710K562EIF3D
CEP78ENSG00000148019.8324.74880540.83060-0.735906.803705.52720K562EIF4A3
CEP78ENSG00000148019.8250.52050440.83220-0.815306.822405.57760K562GPKOW
CEP78ENSG00000148019.8571.20710748.21330-0.389402.699301.89090K562PPIG
CEP78ENSG00000148019.81262.982301520.12590-0.267402.390801.49760K562PUM2
CEP78ENSG00000148019.8461.10450645.04660-0.484303.587102.62000K562RBM22
CEP78ENSG00000148019.8217.07670361.65990-0.736405.218903.85220K562RCC2
CEP78ENSG00000148019.8305.40890441.44100-0.531502.637601.66170K562RPS3
CEP78ENSG00000148019.8422.30280646.91040-0.615306.334705.00580K562SF3B4
CEP78ENSG00000148019.8509.28180659.24640-0.372402.443401.77200K562SRSF1
CEP78ENSG00000148019.8542.77890428.225400.341902.114301.39520K562SYNCRIP
CEP78ENSG00000148019.8299.91770667.28390-1.1537011.8869010.24400K562TARDBP
CEP78ENSG00000148019.8440.58310643.64870-0.546903.394502.47420K562TIA1
CEP78ENSG00000148019.8299.51370405.04410-0.435502.270301.42650K562TRIM56
CEP78ENSG00000148019.8762.34050622.794700.291602.000801.31830K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CEP78 is not available on ENCORE database.





11 RBPs can affect the splicing of CEP78 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECEP78ENSG00000148019.8chr9+808807748088082280880287808804598088135780881983-0.204000.000540.01939excludedK562AKAP8L
SECEP78ENSG00000148019.8chr9+808615848086169880858377808585528086320680863271-0.206000.000070.00124excludedK562AQR
SECEP78ENSG00000148019.8chr9+808552078085528080854938808551118085661180856715-0.139000.012650.09771excludedK562AQR
SECEP78ENSG00000148019.8chr9+808807748088082280880287808804598088135780881983-0.171000.001000.01696excludedK562PUS1
SECEP78ENSG00000148019.8chr9+808552078085528080854938808551118085661180856715-0.083000.000580.01081excludedK562PUS1
SECEP78ENSG00000148019.8chr9+8088077480880822808802878088045980881357808819830.440000.000090.00763includedHepG2PTBP1
SECEP78ENSG00000148019.8chr9+8088077480880822808802878088045980881357808819830.419000.000010.01584includedHepG2UPF1
SECEP78ENSG00000148019.8chr9+808615848086169880858377808585528086320680863271-0.310000.000070.00254excludedK562U2AF1
SECEP78ENSG00000148019.8chr9+808807748088082280880287808804598088135780881983-0.207000.003350.05974excludedK562U2AF1
SECEP78ENSG00000148019.8chr9+808552078085528080854938808551118085661180856715-0.226000.000020.00115excludedHepG2SF3A3
SECEP78ENSG00000148019.8chr9+8088077480880822808802878088045980881357808819830.392000.000530.02933includedHepG2PCBP1
SECEP78ENSG00000148019.8chr9+8088077480880822808802878088045980881357808819830.409000.000440.02410includedHepG2SF3B4
SECEP78ENSG00000148019.8chr9+808807748088082280880287808804598088135780881983-0.267000.000020.00059excludedK562U2AF2
SECEP78ENSG00000148019.8chr9+808807748088082280880287808804598088135780881983-0.208000.000290.01043excludedK562RBM15
A3SSCEP78ENSG00000148019.8chr9+8086155080861698808615848086169880858377808585520.160000.006070.03428longerK562AQR
MXECEP78ENSG00000148019.8chr9+80869751808698808087906580879232808668238086695980880287808804590.081000.013780.081851includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CEP78 is not avaliable on ENCORE database.