CEP44

General Information

Gene Name       : CEP44
Gene ID             : ENSG00000164118.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CEP44)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CEP44ENSG00000164118.128.297.758.02ENCSR000AEF
HepG2CEP44ENSG00000164118.123.427.665.54ENCSR985KAT
K562CEP44ENSG00000164118.1215.0314.9514.99ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CEP44 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CEP44 RNA is bound by 19 proteins.  







eCLIP assay for CEP44 is not avaliable on ENCORE database.





19 proteins are bound to CEP44 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4175239016175239088+3'-UTR,intron-Distal4.090743.25872K562IGF2BP1
chr4175238479175238533+3'-UTR,CDS,intron-Distal,intron-Proximal3.763153.19080K562U2AF2
chr4175238548175238595+3'-UTR,intron-Distal4.732767.87748K562PUM2
chr4175241428175241469+3'-UTR,intron-Distal4.506319.31101K562KHSRP
chr4175239218175239264+3'-UTR,intron-Distal3.357745.00867HepG2HNRNPC
chr4175241396175241428+3'-UTR,intron-Distal4.8482213.80525K562KHSRP
chr4175219053175219129+3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.435877.82456K562SF3B4
chr4175238476175238522+CDS,intron-Distal,intron-Proximal4.702735.52476K562BUD13
chr4175238474175238524+CDS,intron-Distal,intron-Proximal3.748029.97118K562SF3B4
chr4175229837175229870+CDS,intron-Proximal3.274443.21251K562DDX24
chr4175229934175230010+CDS4.446248.80935HepG2BCLAF1
chr4175231000175231022+CDS,intron-Proximal3.764094.20387K562ZNF622
chr4175223189175223230+CDS,intron-Proximal3.102883.94979HepG2BCLAF1
chr4175229833175229935+CDS,intron-Proximal3.6354714.74391K562ZNF622
chr4175223230175223330+CDS3.221243.97102HepG2BCLAF1
chr4175225393175225526+CDS,intron-Proximal3.348367.13168HepG2BCLAF1
chr4175229916175229992+CDS3.921323.65778K562GRWD1
chr4175237352175237471+CDS,intron-Proximal4.130115.79432HepG2BCLAF1
chr4175229786175229873+CDS,intron-Proximal3.667408.07956K562SF3B4
chr4175231022175231122+CDS5.194757.73487HepG2BCLAF1
chr4175229873175229934+CDS3.635435.56491HepG2BCLAF1
chr4175229935175230010+CDS4.1194115.04809K562ZNF622
chr4175231022175231200+CDS3.4374415.31246K562ZNF622
chr4175237529175237558+intron-Distal,intron-Proximal3.523433.48890K562KHSRP
chr4175223760175223790+intron-Distal3.439004.10408K562KHSRP
chr4175214080175214154+intron-Distal4.040373.16986HepG2QKI
chr4175211741175211791+intron-Distal4.5664610.04635K562KHSRP
chr4175237790175237867+intron-Distal,intron-Proximal3.284336.29446K562RBFOX2
chr4175211659175211757+intron-Distal4.138547.01333K562EXOSC5
chr4175211840175211890+intron-Distal3.796253.04224HepG2SUGP2
chr4175237724175237843+intron-Distal,intron-Proximal4.034533.47043HepG2KHSRP
chr4175237719175237774+intron-Distal,intron-Proximal3.089206.83464K562KHSRP
chr4175228787175228897+intron-Distal3.887365.38772K562RBM15
chr4175214273175214332+intron-Distal3.318714.08493K562HNRNPM
chr4175211951175212022+intron-Distal4.118238.67954K562KHSRP
chr4175241840175241909+intron-Distal3.794273.08314K562TARDBP
chr4175217750175217804+intron-Distal3.5708511.36345K562KHSRP
chr4175217674175217750+intron-Distal3.643878.47371K562KHSRP
chr4175231283175231402+intron-Distal,intron-Proximal4.120296.59336K562KHSRP
chr4175211592175211652+intron-Distal3.551787.02852K562KHSRP
chr4175225658175225700+intron-Distal4.176913.02181K562PRPF8
chr4175211660175211741+intron-Distal4.0276511.34805K562KHSRP
chr4175214011175214145+intron-Distal3.848996.62503K562KHSRP
chr4175237755175237865+intron-Distal,intron-Proximal4.015954.35635K562PRPF8
chr4175213932175214002+intron-Distal4.575775.12432K562EXOSC5
chr4175217804175217891+intron-Distal4.8583613.55501K562KHSRP
chr4175218003175218055+intron-Distal3.608164.72639K562KHSRP
chr4175232745175232829+intron-Distal5.091664.99795K562QKI
chr4175217096175217194+intron-Distal4.318454.28663HepG2SUGP2
chr4175213595175213672+intron-Distal3.620294.08064K562KHSRP
chr4175214306175214414+intron-Distal4.6962412.65415HepG2SUGP2
chr4175214079175214157+intron-Distal3.966607.03506HepG2SUGP2
chr4175217077175217139+intron-Distal3.614715.35459K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CEP44 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CEP44 is not available on ENCORE database.

  • 104 RBPs can affect the levels of CEP44.  








The Knockdown/knockout RNA-Seq assay for CEP44 is not available on ENCORE database.





104 RBPs can affect the gene expression of CEP44 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CEP44ENSG00000164118.8205.02040373.29870-0.864602.959802.33400HepG2ACO1
CEP44ENSG00000164118.8216.33530375.17550-0.794302.627201.87700HepG2AKAP8L
CEP44ENSG00000164118.8159.34480439.79480-1.4647015.5500013.85310HepG2ASCC1
CEP44ENSG00000164118.8174.89510340.20980-0.959904.207903.05210HepG2BCCIP
CEP44ENSG00000164118.8190.11680295.66960-0.637102.315401.49570HepG2BCLAF1
CEP44ENSG00000164118.8109.62880169.10670-0.625302.250601.70540HepG2BOP1
CEP44ENSG00000164118.8192.18750274.30420-0.513302.484601.75060HepG2CALR
CEP44ENSG00000164118.8203.46160417.83180-1.038208.730007.41830HepG2CIRBP
CEP44ENSG00000164118.8202.15370373.36540-0.885103.021202.33330HepG2CKAP4
CEP44ENSG00000164118.8306.96780512.77980-0.740308.244507.24710HepG2CELF1
CEP44ENSG00000164118.8205.01480345.31580-0.752202.350301.57690HepG2DDX19B
CEP44ENSG00000164118.8131.44700294.10730-1.161909.392608.22160HepG2DDX21
CEP44ENSG00000164118.8175.16900313.02360-0.837503.115001.75240HepG2DDX27
CEP44ENSG00000164118.8251.48470509.17440-1.017709.129908.04950HepG2DDX3X
CEP44ENSG00000164118.8191.13090334.46890-0.807303.220902.39600HepG2DDX55
CEP44ENSG00000164118.8243.86050437.33590-0.842705.840504.97310HepG2DDX6
CEP44ENSG00000164118.8160.24350242.61240-0.598402.367601.51250HepG2EEF2
CEP44ENSG00000164118.8200.37310420.47670-1.069308.846707.82530HepG2EIF2S1
CEP44ENSG00000164118.8263.35850464.70270-0.819305.782004.85860HepG2EIF4A3
CEP44ENSG00000164118.8312.78140452.40260-0.532502.371301.73230HepG2EIF4B
CEP44ENSG00000164118.8393.85750521.09560-0.403902.437501.67070HepG2EIF4G2
CEP44ENSG00000164118.8363.67410546.79990-0.588405.414504.62180HepG2ETF1
CEP44ENSG00000164118.8350.86020468.78510-0.418002.090501.48600HepG2FXR1
CEP44ENSG00000164118.8304.98580434.90930-0.512002.710602.05120HepG2G3BP1
CEP44ENSG00000164118.8346.65140461.65660-0.413302.074601.31150HepG2G3BP2
CEP44ENSG00000164118.8103.04230175.36880-0.767203.304502.31520HepG2GEMIN5
CEP44ENSG00000164118.8103.18820175.99710-0.770302.867602.21630HepG2GPKOW
CEP44ENSG00000164118.8117.18070244.74820-1.062606.579005.64560HepG2HNRNPA1
CEP44ENSG00000164118.8123.08170185.32760-0.590502.375101.49300HepG2HNRNPM
CEP44ENSG00000164118.8191.71260270.43360-0.496302.727202.12470HepG2HNRNPU
CEP44ENSG00000164118.8201.27790442.09080-1.1352010.348809.13270HepG2IGF2BP2
CEP44ENSG00000164118.8198.06360276.23960-0.480003.029602.26540HepG2ILF2
CEP44ENSG00000164118.8180.28520370.91180-1.040803.150402.26110HepG2LARP4
CEP44ENSG00000164118.8288.66330468.94840-0.700004.726003.87560HepG2MAGOH
CEP44ENSG00000164118.8206.38600471.58610-1.1922010.478609.31160HepG2MATR3
CEP44ENSG00000164118.8112.00860206.14190-0.880002.537001.52730HepG2METAP2
CEP44ENSG00000164118.8142.63970217.39380-0.607902.626201.83830HepG2MSI2
CEP44ENSG00000164118.8238.57020482.70530-1.016708.702707.61280HepG2NCBP2
CEP44ENSG00000164118.8105.88020306.98810-1.535708.574406.60540HepG2NONO
CEP44ENSG00000164118.8233.44000429.92940-0.881006.706205.59010HepG2PABPC4
CEP44ENSG00000164118.8194.67840267.68800-0.459502.376701.58640HepG2PARN
CEP44ENSG00000164118.8218.64380400.64690-0.873709.103408.10580HepG2PCBP1
CEP44ENSG00000164118.8218.91340331.56770-0.598902.702301.67540HepG2PCBP2
CEP44ENSG00000164118.8152.94090258.16760-0.755302.908702.08080HepG2PRPF8
CEP44ENSG00000164118.8276.52420407.67320-0.560003.912203.28650HepG2PTBP1
CEP44ENSG00000164118.8282.85860521.95240-0.883809.141008.14210HepG2PUF60
CEP44ENSG00000164118.8320.54810554.04960-0.7895011.4366010.40210HepG2PUM1
CEP44ENSG00000164118.8398.66680553.66100-0.473803.736102.96200HepG2PUM2
CEP44ENSG00000164118.8309.36300457.02820-0.563004.447003.83050HepG2RBM22
CEP44ENSG00000164118.8248.29690423.86430-0.771505.036203.67930HepG2RBM27
CEP44ENSG00000164118.8360.67200453.70110-0.331101.886401.42070HepG2NELFE
CEP44ENSG00000164118.858.52730191.63900-1.7112012.4575011.26690HepG2RPS19
CEP44ENSG00000164118.8242.45720390.92700-0.689204.238703.25660HepG2RPS2
CEP44ENSG00000164118.8228.78110432.69940-0.919406.310105.10660HepG2RPS3A
CEP44ENSG00000164118.8279.38270399.03900-0.514302.636801.58890HepG2RPS5
CEP44ENSG00000164118.887.86590192.35500-1.130406.031004.66000HepG2SERBP1
CEP44ENSG00000164118.8157.97170259.72130-0.717303.072002.36140HepG2SF3A3
CEP44ENSG00000164118.8281.10910424.44050-0.594404.623803.88960HepG2SF3B4
CEP44ENSG00000164118.8395.34080500.41780-0.340002.586701.90520HepG2SLBP
CEP44ENSG00000164118.8167.38770280.85890-0.746705.693304.82420HepG2SMN1
CEP44ENSG00000164118.8326.51540443.02390-0.440202.941102.45720HepG2SRSF1
CEP44ENSG00000164118.8269.15250178.871700.589402.368201.45120HepG2SRSF3
CEP44ENSG00000164118.8322.25570515.32090-0.677307.339206.38690HepG2SRSF5
CEP44ENSG00000164118.8278.05880360.42350-0.374302.279101.76790HepG2SRSF9
CEP44ENSG00000164118.8355.30420448.20250-0.335102.010701.55580HepG2SSB
CEP44ENSG00000164118.8349.06330586.08850-0.747608.734307.73310HepG2SUCLG1
CEP44ENSG00000164118.8143.34860333.00270-1.216005.411904.51520HepG2SUPV3L1
CEP44ENSG00000164118.8101.03320163.68680-0.696102.510101.81480HepG2TARDBP
CEP44ENSG00000164118.8106.49690223.22680-1.067705.208903.90460HepG2TFIP11
CEP44ENSG00000164118.8113.25920262.79200-1.2143010.197909.34300HepG2TIAL1
CEP44ENSG00000164118.8153.90180265.12480-0.784705.670704.91590HepG2TRIM56
CEP44ENSG00000164118.8300.59670509.88310-0.762304.492403.34690HepG2TUFM
CEP44ENSG00000164118.8155.48970335.51450-1.109602.994301.96380HepG2U2AF2
CEP44ENSG00000164118.8381.27960539.67540-0.501202.760501.92540HepG2UBE2L3
CEP44ENSG00000164118.8139.36190230.33290-0.724904.457903.60740HepG2UPF1
CEP44ENSG00000164118.8122.29740222.37760-0.862605.344904.55760HepG2UTP3
CEP44ENSG00000164118.8186.16920327.80330-0.816203.325502.53580HepG2XRN2
CEP44ENSG00000164118.8111.99640253.32240-1.1775010.901609.99340HepG2ZNF622
CEP44ENSG00000164118.82011.976101616.517000.315604.681203.97720K562AGGF1
CEP44ENSG00000164118.82016.855301682.081300.261802.140001.56250K562AKAP8L
CEP44ENSG00000164118.81413.650301936.45520-0.454005.503003.67530K562APOBEC3C
CEP44ENSG00000164118.82295.972001764.950000.379405.614404.26050K562ATP5C1
CEP44ENSG00000164118.8292.10230422.97480-0.534103.280402.11050K562CCAR1
CEP44ENSG00000164118.81014.67330787.669200.365303.533901.79780K562CEBPZ
CEP44ENSG00000164118.81090.395701481.95770-0.442703.305302.60340K562DDX47
CEP44ENSG00000164118.8727.80970972.95720-0.418803.045002.08540K562EFTUD2
CEP44ENSG00000164118.8793.859501042.13310-0.392604.168803.31290K562EIF2S2
CEP44ENSG00000164118.8235.22500430.24950-0.871103.680602.50310K562EIF3A
CEP44ENSG00000164118.8733.408801293.30550-0.8184016.1278014.13630K562EIF3G
CEP44ENSG00000164118.8857.314701679.72530-0.970309.938108.36810K562EIF4A3
CEP44ENSG00000164118.81456.674501143.348800.349303.261801.79390K562FUS
CEP44ENSG00000164118.8783.416201746.85480-1.1569020.2138018.69140K562FXR1
CEP44ENSG00000164118.82466.866901788.751200.463601.983401.39730K562G3BP2
CEP44ENSG00000164118.8931.496301388.83620-0.576305.433504.36980K562GRSF1
CEP44ENSG00000164118.82265.169601505.010900.589702.498601.35680K562HNRNPA2B1
CEP44ENSG00000164118.8386.49900624.64740-0.692605.245603.91610K562HNRNPM
CEP44ENSG00000164118.82770.072901785.031300.633904.045703.02300K562KIF1C
CEP44ENSG00000164118.81186.363602278.64000-0.941606.237904.95440K562MAGOH
CEP44ENSG00000164118.82096.830001708.777000.295102.331601.37240K562MAK16
CEP44ENSG00000164118.81558.081602274.23020-0.545603.287502.27130K562MATR3
CEP44ENSG00000164118.8640.72300958.61730-0.581304.882403.02810K562NONO
CEP44ENSG00000164118.81416.296902027.68100-0.517702.754201.77580K562PCBP2
CEP44ENSG00000164118.8592.80330946.79880-0.675506.547505.39250K562PRPF8
CEP44ENSG00000164118.81061.286402213.73680-1.060708.475007.35280K562PTBP1
CEP44ENSG00000164118.81876.225102394.48770-0.351903.347802.45140K562PUF60
CEP44ENSG00000164118.82694.075401668.005300.691604.074303.43430K562PUS1
CEP44ENSG00000164118.82342.028501625.350700.526908.405407.39810K562RBM15
CEP44ENSG00000164118.81146.347302123.47410-0.889406.252504.92110K562RBM22
CEP44ENSG00000164118.8604.67600964.43960-0.673505.471604.32010K562RPS19
CEP44ENSG00000164118.8648.944001106.11860-0.769302.808901.79910K562RPS3
CEP44ENSG00000164118.8333.82770539.97120-0.693805.971804.38080K562SAFB
CEP44ENSG00000164118.81265.861701860.61920-0.555708.493006.95310K562SF3B4
CEP44ENSG00000164118.8473.72640658.05950-0.474203.252402.11860K562SRFBP1
CEP44ENSG00000164118.81289.519201065.107000.275703.265502.25760K562SRPK2
CEP44ENSG00000164118.81321.039202170.04300-0.716105.065304.11250K562SRSF1
CEP44ENSG00000164118.81503.68920996.455600.593506.468904.33430K562SSRP1
CEP44ENSG00000164118.81252.50860911.395800.458603.608902.14640K562STAU1
CEP44ENSG00000164118.8340.83410607.84290-0.834609.848808.29270K562SYNCRIP
CEP44ENSG00000164118.81406.854502196.56370-0.642804.185203.30980K562TARDBP
CEP44ENSG00000164118.81602.041202118.74480-0.403302.092501.38790K562TIA1
CEP44ENSG00000164118.81161.40870993.970700.224502.200701.43920K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CEP44 is not available on ENCORE database.





12 RBPs can affect the splicing of CEP44 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECEP44ENSG00000164118.8chr4+1752376801752377181752373161752374411752384851752414820.124000.000280.00735includedK562SRSF1
SECEP44ENSG00000164118.8chr4+1752191161752192131752048271752050941752202221752203610.455000.000170.04068includedK562FTO
SECEP44ENSG00000164118.8chr4+175237680175237718175237316175237441175238485175241482-0.508000.000000.00000excludedK562SF3B4
SECEP44ENSG00000164118.8chr4+175219116175219213175205073175205083175220222175220361-0.171000.000430.09510excludedK562PCBP1
SECEP44ENSG00000164118.8chr4+175219116175219213175204827175205094175220222175220361-0.287000.000000.00002excludedK562PUS1
SECEP44ENSG00000164118.8chr4+1752246211752247821752231891752233371752248531752250000.082000.000020.00711includedK562RBM22
SECEP44ENSG00000164118.8chr4+175219116175219213175204827175205094175220222175220361-0.229000.000060.00396excludedK562UTP18
SECEP44ENSG00000164118.8chr4+175237680175237718175237316175237441175238485175241482-0.511000.000000.00000excludedK562U2AF2
SECEP44ENSG00000164118.8chr4+175219116175219213175205054175205212175220222175220361-0.160000.002320.07127excludedK562HNRNPU
SECEP44ENSG00000164118.8chr4+175219116175219213175204827175205094175220222175220361-0.283000.000000.00022excludedK562RBM15
SECEP44ENSG00000164118.8chr4+175219116175219213175204827175205094175220222175220361-0.254000.000040.00222excludedK562AGGF1
SECEP44ENSG00000164118.8chr4+1752246211752247821752231891752233371752248531752250000.077000.000080.00530includedK562PTBP1
MXECEP44ENSG00000164118.8chr4+175237680175237718175238485175238530175237316175237441175239690175239816-0.359000.000000.000002includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CEP44 is not avaliable on ENCORE database.