CEP44

General Information

Gene Name : CEP44
Gene ID : ENSG00000164118.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CEP44)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CEP44	ENSG00000164118.12	8.29	7.75	8.02	ENCSR000AEF
HepG2	CEP44	ENSG00000164118.12	3.42	7.66	5.54	ENCSR985KAT
K562	CEP44	ENSG00000164118.12	15.03	14.95	14.99	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CEP44 is not avaliable on ENCORE database.

Proteins bound to RNA

CEP44 RNA is bound by 19 proteins.

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eCLIP assay for CEP44 is not avaliable on ENCORE database.

19 proteins are bound to CEP44 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	175231022	175231200	+	CDS	3.43744	15.31246	K562	ZNF622
chr4	175229935	175230010	+	CDS	4.11941	15.04809	K562	ZNF622
chr4	175229833	175229935	+	CDS,intron-Proximal	3.63547	14.74391	K562	ZNF622
chr4	175241396	175241428	+	3'-UTR,intron-Distal	4.84822	13.80525	K562	KHSRP
chr4	175217804	175217891	+	intron-Distal	4.85836	13.55501	K562	KHSRP
chr4	175214306	175214414	+	intron-Distal	4.69624	12.65415	HepG2	SUGP2
chr4	175217750	175217804	+	intron-Distal	3.57085	11.36345	K562	KHSRP
chr4	175211660	175211741	+	intron-Distal	4.02765	11.34805	K562	KHSRP
chr4	175211741	175211791	+	intron-Distal	4.56646	10.04635	K562	KHSRP
chr4	175238474	175238524	+	CDS,intron-Distal,intron-Proximal	3.74802	9.97118	K562	SF3B4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 53 entries

eCLIP assay for CEP44 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CEP44 is not available on ENCORE database.
104 RBPs can affect the levels of CEP44.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CEP44 is not available on ENCORE database.

104 RBPs can affect the gene expression of CEP44 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CEP44	ENSG00000164118.8	783.41620	1746.85480	-1.15690	20.21380	18.69140	K562	FXR1
CEP44	ENSG00000164118.8	733.40880	1293.30550	-0.81840	16.12780	14.13630	K562	EIF3G
CEP44	ENSG00000164118.8	159.34480	439.79480	-1.46470	15.55000	13.85310	HepG2	ASCC1
CEP44	ENSG00000164118.8	58.52730	191.63900	-1.71120	12.45750	11.26690	HepG2	RPS19
CEP44	ENSG00000164118.8	320.54810	554.04960	-0.78950	11.43660	10.40210	HepG2	PUM1
CEP44	ENSG00000164118.8	111.99640	253.32240	-1.17750	10.90160	9.99340	HepG2	ZNF622
CEP44	ENSG00000164118.8	113.25920	262.79200	-1.21430	10.19790	9.34300	HepG2	TIAL1
CEP44	ENSG00000164118.8	206.38600	471.58610	-1.19220	10.47860	9.31160	HepG2	MATR3
CEP44	ENSG00000164118.8	201.27790	442.09080	-1.13520	10.34880	9.13270	HepG2	IGF2BP2
CEP44	ENSG00000164118.8	857.31470	1679.72530	-0.97030	9.93810	8.36810	K562	EIF4A3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 121 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CEP44 is not available on ENCORE database.

12 RBPs can affect the splicing of CEP44 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CEP44	ENSG00000164118.8	chr4	+	175237680	175237718			175237316	175237441	175238485	175241482	-0.50800	0.00000	0.00000	excluded	K562	SF3B4
SE	CEP44	ENSG00000164118.8	chr4	+	175219116	175219213			175204827	175205094	175220222	175220361	-0.28700	0.00000	0.00002	excluded	K562	PUS1
SE	CEP44	ENSG00000164118.8	chr4	+	175237680	175237718			175237316	175237441	175238485	175241482	-0.51100	0.00000	0.00000	excluded	K562	U2AF2
SE	CEP44	ENSG00000164118.8	chr4	+	175219116	175219213			175204827	175205094	175220222	175220361	-0.28300	0.00000	0.00022	excluded	K562	RBM15
MXE	CEP44	ENSG00000164118.8	chr4	+	175237680	175237718	175238485	175238530	175237316	175237441	175239690	175239816	-0.35900	0.00000	0.00000	2included	K562	U2AF2
SE	CEP44	ENSG00000164118.8	chr4	+	175224621	175224782			175223189	175223337	175224853	175225000	0.08200	0.00002	0.00711	included	K562	RBM22
SE	CEP44	ENSG00000164118.8	chr4	+	175219116	175219213			175204827	175205094	175220222	175220361	-0.25400	0.00004	0.00222	excluded	K562	AGGF1
SE	CEP44	ENSG00000164118.8	chr4	+	175219116	175219213			175204827	175205094	175220222	175220361	-0.22900	0.00006	0.00396	excluded	K562	UTP18
SE	CEP44	ENSG00000164118.8	chr4	+	175224621	175224782			175223189	175223337	175224853	175225000	0.07700	0.00008	0.00530	included	K562	PTBP1
SE	CEP44	ENSG00000164118.8	chr4	+	175219116	175219213			175204827	175205094	175220222	175220361	0.45500	0.00017	0.04068	included	K562	FTO

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CEP44

General Information

Functions

Localization

Domains (AlphaFold: CEP44)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CEP44 is not avaliable on ENCORE database.

19 proteins are bound to CEP44 RNA:

eCLIP assay for CEP44 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CEP44 is not available on ENCORE database.

104 RBPs can affect the gene expression of CEP44 :

The Knockdown/knockout RNA-Seq assay for CEP44 is not available on ENCORE database.

12 RBPs can affect the splicing of CEP44 :

The Knockdown/knockout RNA-Seq assay for CEP44 is not avaliable on ENCORE database.