C5orf45

General Information

Gene Name       : C5orf45
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C5orf45)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C5orf45 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C5orf45 RNA is bound by 18 proteins.  







eCLIP assay for C5orf45 is not avaliable on ENCORE database.





18 proteins are bound to C5orf45 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5179264634179264749-3'-UTR,CDS,intron-Distal,intron-Proximal3.214245.73167HepG2LSM11
chr5179268905179269056-3'-UTR,CDS,intron-Distal,intron-Proximal4.1468011.63125K562UCHL5
chr5179264927179264987-3'-UTR,intron-Distal,intron-Proximal6.2549015.54047HepG2RBM5
chr5179271149179271220-3'-UTR,CDS,intron-Distal,intron-Proximal4.255783.71613K562UCHL5
chr5179267878179267959-3'-UTR,CDS,intron-Distal,intron-Proximal4.063896.47664K562ZNF622
chr5179264934179265001-3'-UTR,intron-Distal,intron-Proximal4.307267.21864HepG2SF3A3
chr5179268902179268970-3'-UTR,CDS,intron-Distal,intron-Proximal4.3957711.49169HepG2GRWD1
chr5179268908179269045-3'-UTR,CDS,intron-Distal,intron-Proximal3.672599.28980HepG2BCLAF1
chr5179267818179267948-3'-UTR,CDS,intron-Distal,intron-Proximal3.919803.88696K562GRWD1
chr5179264980179265058-3'-UTR,intron-Distal,intron-Proximal3.264554.63335HepG2LSM11
chr5179268906179268991-3'-UTR,CDS,intron-Distal,intron-Proximal4.5826319.97843HepG2PPIG
chr5179267865179267959-3'-UTR,CDS,intron-Distal,intron-Proximal3.316158.95239HepG2GRWD1
chr5179264870179264978-3'-UTR,CDS,intron-Distal,intron-Proximal4.489504.77050HepG2SF3B4
chr5179264869179264934-3'-UTR,CDS,intron-Distal,intron-Proximal3.738166.03449HepG2SF3A3
chr5179264452179264534-3'-UTR,CDS,intron-Distal,intron-Proximal3.335203.96074HepG2ZC3H11A
chr5179266790179266840-3'-UTR,intron-Distal3.747898.98256HepG2U2AF2
chr5179267855179267937-3'-UTR,CDS,intron-Distal,intron-Proximal3.821417.65975HepG2BCLAF1
chr5179265631179265677-3'-UTR,intron-Distal4.531215.67140HepG2HNRNPC
chr5179267839179267963-3'-UTR,CDS,intron-Distal,intron-Proximal4.3621617.98460HepG2PPIG
chr5179264313179264371-3'-UTR,intron-Distal3.375754.51056HepG2LSM11
chr5179264853179264901-3'-UTR,CDS,intron-Distal,intron-Proximal3.823895.86177HepG2U2AF2
chr5179267873179267961-3'-UTR,CDS,intron-Distal,intron-Proximal3.204374.61143K562UCHL5
chr5179268970179269038-3'-UTR,CDS,intron-Distal,intron-Proximal4.651556.94886HepG2GRWD1
chr5179264754179264903-3'-UTR,CDS,intron-Distal,intron-Proximal3.835506.72914HepG2SRSF1
chr5179268991179269066-3'-UTR,CDS,intron-Distal,intron-Proximal3.725619.75394HepG2PPIG
chr5179280376179280402-5'-UTR,CDS,intron-Distal,intron-Proximal4.384413.79199HepG2PPIG
chr5179280322179280383-5'-UTR,CDS,intron-Distal,intron-Proximal3.234653.47285K562PRPF8
chr5179280323179280414-5'-UTR,CDS,intron-Distal,intron-Proximal3.668528.47339HepG2PRPF8
chr5179275896179275971-intron-Distal4.499735.58061HepG2SUGP2
chr5179275524179275657-intron-Distal5.3652910.57454HepG2SUGP2
chr5179277717179277751-intron-Distal3.351013.91859HepG2SUGP2
chr5179279612179279702-intron-Distal3.038355.43131HepG2SUGP2
chr5179275288179275452-intron-Distal4.006313.42844K562KHSRP
chr5179277597179277671-intron-Distal5.4640512.10180HepG2SUGP2
chr5179277791179277879-intron-Distal5.5368112.60653HepG2SUGP2
chr5179277465179277539-intron-Distal4.2000611.97556HepG2SUGP2
chr5179279880179279979-intron-Distal4.724214.60209HepG2MATR3
chr5179278099179278170-intron-Distal,intron-Proximal4.3991210.04909HepG2SUGP2
chr5179275730179275872-intron-Distal4.3073715.02086HepG2SUGP2
chr5179277053179277106-intron-Distal4.608505.35792HepG2SUGP2
chr5179276820179276955-intron-Distal4.576155.59071K562NONO
chr5179279858179279985-intron-Distal5.2399017.55292HepG2SUGP2
chr5179277539179277590-intron-Distal5.091598.82993HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C5orf45 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C5orf45 is not available on ENCORE database.

  • 90 RBPs can affect the levels of C5orf45.  








The Knockdown/knockout RNA-Seq assay for C5orf45 is not available on ENCORE database.





90 RBPs can affect the gene expression of C5orf45 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C5orf45ENSG00000161010.10623.88610741.36150-0.248901.948301.42130HepG2ACO1
C5orf45ENSG00000161010.10556.47720744.89640-0.420704.278803.33940HepG2AKAP8L
C5orf45ENSG00000161010.10552.64100792.59990-0.520304.424102.68020HepG2ATP5C1
C5orf45ENSG00000161010.10744.685101110.02440-0.575905.705204.77970HepG2AUH
C5orf45ENSG00000161010.10907.34900555.807000.707004.678803.46010HepG2BCCIP
C5orf45ENSG00000161010.101356.64840847.657200.678405.542904.13990HepG2CCAR1
C5orf45ENSG00000161010.10987.13100741.262700.413205.516504.63700HepG2CKAP4
C5orf45ENSG00000161010.10739.85820938.20990-0.342703.220002.53710HepG2CELF1
C5orf45ENSG00000161010.10849.514901008.78470-0.247902.347601.65640HepG2DAZAP1
C5orf45ENSG00000161010.10810.77100685.681800.241702.089001.35610HepG2DDX19B
C5orf45ENSG00000161010.10568.60280742.25770-0.384502.578001.32420HepG2DDX47
C5orf45ENSG00000161010.10376.03320499.96200-0.411002.933502.21300HepG2DNAJC21
C5orf45ENSG00000161010.10728.65920495.601600.556007.834406.80820HepG2DNAJC2
C5orf45ENSG00000161010.10851.07870462.470300.879809.321708.27310HepG2EIF2S1
C5orf45ENSG00000161010.10808.59000511.085000.661703.846403.09710HepG2EIF4A3
C5orf45ENSG00000161010.10680.02620953.37910-0.487502.272001.52810HepG2EIF4G2
C5orf45ENSG00000161010.10994.532701274.58310-0.357902.719402.12280HepG2ETF1
C5orf45ENSG00000161010.10695.45600887.25340-0.351402.055401.38670HepG2FIP1L1
C5orf45ENSG00000161010.10689.26980363.490200.9231010.927409.41450HepG2FUBP3
C5orf45ENSG00000161010.10834.93120515.660400.695106.285005.26890HepG2FXR1
C5orf45ENSG00000161010.10766.21210478.352200.679605.614704.68080HepG2G3BP1
C5orf45ENSG00000161010.10793.74130507.830100.644205.517404.24700HepG2G3BP2
C5orf45ENSG00000161010.10838.11260509.949700.716704.856803.39110HepG2GRSF1
C5orf45ENSG00000161010.10570.17950707.82580-0.312002.659401.69900HepG2HDGF
C5orf45ENSG00000161010.10757.69610927.11230-0.291102.375501.50130HepG2HNRNPA2B1
C5orf45ENSG00000161010.10776.28160561.461800.467303.529002.75350HepG2HNRNPC
C5orf45ENSG00000161010.10785.04180652.228600.267301.977101.36400HepG2HNRNPF
C5orf45ENSG00000161010.101059.05630484.371301.1285017.2942015.70400HepG2HNRNPK
C5orf45ENSG00000161010.10701.70170486.235100.529103.675802.90640HepG2IGF2BP2
C5orf45ENSG00000161010.10747.84170569.718500.392403.000502.23970HepG2ILF2
C5orf45ENSG00000161010.10787.05050489.068400.686304.766503.41270HepG2KHSRP
C5orf45ENSG00000161010.10900.19690515.840400.803208.029906.92460HepG2MAGOH
C5orf45ENSG00000161010.10952.52530530.947300.843108.712407.62140HepG2NCBP2
C5orf45ENSG00000161010.10274.37220503.51550-0.875904.944403.73070HepG2PABPC1
C5orf45ENSG00000161010.10615.87830472.845000.381202.084501.44960HepG2PABPC4
C5orf45ENSG00000161010.10605.91040498.521600.281302.035101.50170HepG2PCBP1
C5orf45ENSG00000161010.10924.52930633.834000.544503.124302.02360HepG2PCBP2
C5orf45ENSG00000161010.10886.14880729.363200.280802.351501.63160HepG2PRPF4
C5orf45ENSG00000161010.10702.161801012.91930-0.528605.876604.91270HepG2PUM2
C5orf45ENSG00000161010.10733.57880549.349800.417103.526902.83320HepG2QKI
C5orf45ENSG00000161010.10302.02490611.57470-1.017906.362405.31840HepG2RAVER1
C5orf45ENSG00000161010.10809.792301065.28920-0.395602.859102.33440HepG2RBM22
C5orf45ENSG00000161010.101013.09010564.544600.8435015.5031014.41780HepG2NELFE
C5orf45ENSG00000161010.101014.15490525.839800.9475015.8422014.56680HepG2RECQL
C5orf45ENSG00000161010.10883.37990702.648800.330102.115001.50810HepG2RPLP0
C5orf45ENSG00000161010.10881.27430553.255600.671504.753703.70610HepG2RPS3A
C5orf45ENSG00000161010.10616.87060496.689000.312502.459501.84620HepG2SAFB2
C5orf45ENSG00000161010.10368.63490506.61220-0.458702.689501.76560HepG2SERBP1
C5orf45ENSG00000161010.10778.64570528.106100.560006.765205.90480HepG2SF3B4
C5orf45ENSG00000161010.10883.68300645.816400.452302.176101.48670HepG2SNRNP70
C5orf45ENSG00000161010.10833.824901203.15830-0.529004.449703.85790HepG2SRFBP1
C5orf45ENSG00000161010.10652.59550942.82230-0.530807.021706.08870HepG2SRSF5
C5orf45ENSG00000161010.10787.04160640.802000.296502.318201.67620HepG2SRSF7
C5orf45ENSG00000161010.10438.13050598.91290-0.451003.703802.62760HepG2SUPT6H
C5orf45ENSG00000161010.10718.24740495.542700.535405.771605.01260HepG2TAF15
C5orf45ENSG00000161010.10597.94990455.274400.393202.828001.98300HepG2TIA1
C5orf45ENSG00000161010.10971.05540541.889100.841506.077105.38810HepG2TIAL1
C5orf45ENSG00000161010.10519.60340758.85270-0.546404.315603.54020HepG2U2AF1
C5orf45ENSG00000161010.10725.64420987.46480-0.444502.746001.91260HepG2UBE2L3
C5orf45ENSG00000161010.10483.39730321.294400.589203.441702.59960HepG2UCHL5
C5orf45ENSG00000161010.10536.14770766.74560-0.516105.641804.70060HepG2UPF1
C5orf45ENSG00000161010.10900.72640497.922100.855105.524304.07480HepG2UPF2
C5orf45ENSG00000161010.101110.20370740.268700.584609.263408.27350HepG2UTP3
C5orf45ENSG00000161010.10963.51510535.490200.847307.697206.49970HepG2XRN2
C5orf45ENSG00000161010.10705.37670955.66230-0.438103.778603.01310K562AKAP8L
C5orf45ENSG00000161010.101326.336601591.52420-0.263002.469401.54900K562CELF1
C5orf45ENSG00000161010.101192.31140990.997900.266702.548301.91970K562DDX47
C5orf45ENSG00000161010.10723.73400476.680400.602304.922303.68900K562EFTUD2
C5orf45ENSG00000161010.10694.07940510.263100.443802.409001.45140K562EIF3D
C5orf45ENSG00000161010.10551.19500717.12610-0.379702.517101.70920K562FIP1L1
C5orf45ENSG00000161010.10173.66080358.34690-1.045107.238205.97970K562G3BP2
C5orf45ENSG00000161010.10380.55450576.46050-0.599104.694303.66460K562GPKOW
C5orf45ENSG00000161010.10626.36440425.475500.557804.444302.95520K562HNRNPF
C5orf45ENSG00000161010.10652.14770475.885400.454502.869701.61280K562HNRNPK
C5orf45ENSG00000161010.10687.25840483.372800.507603.463101.77950K562LIN28B
C5orf45ENSG00000161010.10578.20370425.030000.443902.949301.36550K562LSM11
C5orf45ENSG00000161010.10924.128401136.22040-0.298102.406901.56730K562MBNL1
C5orf45ENSG00000161010.10913.88590754.560000.276302.406201.65090K562MTPAP
C5orf45ENSG00000161010.10570.00450796.40240-0.482502.734601.85830K562NAA15
C5orf45ENSG00000161010.10745.44640469.176800.667905.453803.19460K562NUSAP1
C5orf45ENSG00000161010.10768.85070445.574100.786908.953007.15850K562PCBP2
C5orf45ENSG00000161010.101248.75120828.766400.591304.842603.74540K562PCBP3
C5orf45ENSG00000161010.10682.55970465.123400.553204.496502.62360K562PHF6
C5orf45ENSG00000161010.101204.25830770.394700.644406.396603.92670K562PKM
C5orf45ENSG00000161010.10959.03620635.695800.593106.778005.53470K562POLR2G
C5orf45ENSG00000161010.10716.91870427.091100.747207.570405.93200K562PSIP1
C5orf45ENSG00000161010.10662.66660947.88810-0.516404.372103.71200K562PUS1
C5orf45ENSG00000161010.10685.91170923.46370-0.429004.365803.63880K562RBM15
C5orf45ENSG00000161010.10208.78460340.00490-0.703504.825102.98860K562RBM25
C5orf45ENSG00000161010.10636.58080389.852400.707307.154505.55680K562RCC2
C5orf45ENSG00000161010.10652.66530472.416600.466202.441301.67510K562RPS19
C5orf45ENSG00000161010.10320.91270474.19320-0.563302.933601.56520K562RRP9
C5orf45ENSG00000161010.10568.30630369.550300.620803.686002.45560K562SRFBP1
C5orf45ENSG00000161010.10659.39530410.767500.682705.479904.11880K562TIAL1
C5orf45ENSG00000161010.10669.25100436.596200.616104.989603.62910K562TRIM56
C5orf45ENSG00000161010.10828.099901145.18380-0.467704.615102.97600K562TROVE2
C5orf45ENSG00000161010.10230.83500358.82520-0.636404.558203.53320K562U2AF2
C5orf45ENSG00000161010.101051.96990888.933000.242802.151201.51160K562UPF1
C5orf45ENSG00000161010.10761.217901031.88560-0.438902.795101.58690K562UTP3
C5orf45ENSG00000161010.101037.75410790.986800.391605.100103.98140K562WDR43
C5orf45ENSG00000161010.101022.843601285.19260-0.329402.605001.35840K562WRN
C5orf45ENSG00000161010.10853.815801221.84990-0.517105.398604.12510K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C5orf45 is not available on ENCORE database.





17 RBPs can affect the splicing of C5orf45 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC5orf45ENSG00000161010.10chr5-1792749771792750661792711511792712271792803771792804370.058000.007310.07146includedHepG2U2AF2
SEC5orf45ENSG00000161010.10chr5-179280196179280276179274977179275066179280377179280437-0.104000.000040.00085excludedHepG2U2AF2
SEC5orf45ENSG00000161010.10chr5-179271151179271227179268906179269064179274977179275066-0.118000.000120.00201excludedK562AQR
SEC5orf45ENSG00000161010.10chr5-1792801961792802761792749771792750661792803771792804370.382000.000150.03195includedHepG2TIA1
A3SSC5orf45ENSG00000161010.10chr5-1792749771792751131792749771792750661792803771792804370.098000.002200.01403longerK562AQR
A3SSC5orf45ENSG00000161010.10chr5-1792679201792681431792679201792679591792689061792690640.066000.003800.02269longerK562AQR
A5SSC5orf45ENSG00000161010.10chr5-179280196179280437179280377179280437179274977179275066-0.102000.000000.00018shorterHepG2U2AF2
RIC5orf45ENSG00000161010.10chr5-1792642751792679591792642751792648851792678711792679590.396000.000570.02476includedHepG2TIA1
RIC5orf45ENSG00000161010.10chr5-179264275179267959179264275179264885179267871179267959-0.345000.002300.09649excludedHepG2SUPV3L1
RIC5orf45ENSG00000161010.10chr5-1792642751792679591792642751792648851792678711792679590.337000.001100.01440includedHepG2QKI
RIC5orf45ENSG00000161010.10chr5-1792642751792679591792642751792648851792678711792679590.368000.001170.01357includedHepG2TAF15
RIC5orf45ENSG00000161010.10chr5-1792642751792679591792642751792648851792678711792679590.373000.000200.00243includedHepG2SF3B4
RIC5orf45ENSG00000161010.10chr5-1792642751792679591792642751792648851792678711792679590.392000.005670.07579includedHepG2FUBP3
RIC5orf45ENSG00000161010.10chr5-179264275179267959179264275179264885179267871179267959-0.337000.000160.00276excludedHepG2RBM22
RIC5orf45ENSG00000161010.10chr5-1792642751792679591792642751792648851792678711792679590.485000.000590.00880includedHepG2HNRNPK
MXEC5orf45ENSG00000161010.10chr5-179278242179278424179280196179280276179274977179275066179280377179280437-0.063000.002280.071262includedHepG2PTBP1
MXEC5orf45ENSG00000161010.10chr5-1792711511792712271792749771792750661792689061792690641792803771792804370.191000.003370.048481includedK562SRSF1
MXEC5orf45ENSG00000161010.10chr5-1792782421792784241792801961792802761792749771792750661792803771792804370.065000.001230.043681includedHepG2TAF15
MXEC5orf45ENSG00000161010.10chr5-1792711511792712271792749771792750661792689061792690641792803771792804370.195000.002480.070361includedK562LIN28B
MXEC5orf45ENSG00000161010.10chr5-179271151179271227179274977179275066179268906179269064179280377179280437-0.173000.000200.053212includedK562UTP3
MXEC5orf45ENSG00000161010.10chr5-1792711511792712271792749771792751131792689061792690641792803771792804370.146000.000010.000211includedK562AQR
MXEC5orf45ENSG00000161010.10chr5-179274977179275066179280377179280437179268906179269064179285730179285808-0.236000.000050.000602includedK562AQR
MXEC5orf45ENSG00000161010.10chr5-1792711511792712271792749771792750661792689061792690641792801961792802760.190000.010700.096481includedK562U2AF2
MXEC5orf45ENSG00000161010.10chr5-179278242179278424179280196179280276179274977179275066179280377179280437-0.212000.007800.044242includedHepG2U2AF2
MXEC5orf45ENSG00000161010.10chr5-179278242179278337179280196179280276179274977179275066179280377179280437-0.216000.007970.044932includedHepG2U2AF2
MXEC5orf45ENSG00000161010.10chr5-1792782421792784241792801961792802761792749771792750661792803771792804370.084000.001290.042051includedHepG2PCBP1
MXEC5orf45ENSG00000161010.10chr5-1792782421792783371792801961792802761792749771792750661792803771792804370.205000.001750.052941includedHepG2PCBP1
MXEC5orf45ENSG00000161010.10chr5-1792782421792784241792801961792802761792749771792750661792803771792804370.167000.001400.048111includedHepG2SF3B4
MXEC5orf45ENSG00000161010.10chr5-1792782421792783371792801961792802761792749771792750661792803771792804370.168000.002160.064771includedHepG2SF3B4
MXEC5orf45ENSG00000161010.10chr5-1792782421792784241792801961792802761792749771792750661792803771792804370.066000.001170.075951includedHepG2QKI
MXEC5orf45ENSG00000161010.10chr5-1792782421792783371792801961792802761792749771792750661792803771792804370.074000.001760.096061includedHepG2QKI
MXEC5orf45ENSG00000161010.10chr5-1792711511792712271792749771792750661792689061792690641792803771792804370.272000.000030.002211includedK562DDX55
MXEC5orf45ENSG00000161010.10chr5-1792711511792712271792749771792750661792689061792690641792801961792802760.260000.001840.047331includedHepG2TIAL1
MXEC5orf45ENSG00000161010.10chr5-1792711511792712271792749771792750661792689061792690641792803771792804370.198000.004530.086221includedHepG2TIAL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C5orf45 is not avaliable on ENCORE database.