BOD1

General Information

Gene Name       : BOD1
Gene ID             : ENSG00000145919.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BOD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BOD1ENSG00000145919.1024.1119.5321.82ENCSR000AEF
HepG2BOD1ENSG00000145919.1083.3492.6888.01ENCSR985KAT
K562BOD1ENSG00000145919.1015.8716.5516.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BOD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BOD1 RNA is bound by 7 proteins.  







eCLIP assay for BOD1 is not avaliable on ENCORE database.





7 proteins are bound to BOD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5173035048173035149-3'-UTR,intron-Distal,intron-Proximal4.484014.49605HepG2UPF1
chr5173043384173043457-5'-UTR,CDS,intron-Distal,intron-Proximal4.144279.88902HepG2DDX3X
chr5173043534173043612-5'-UTR,intron-Distal,intron-Proximal4.941485.35746HepG2DDX3X
chr5173040134173040214-5'-UTR,CDS,intron-Distal3.351553.60157HepG2GRWD1
chr5173043346173043407-CDS,intron-Distal,intron-Proximal3.936163.18217HepG2NKRF
chr5173043292173043384-CDS,intron-Distal,intron-Proximal5.122598.90399HepG2DDX3X
chr5173043161173043246-CDS,intron-Distal3.337593.34231K562RBM15
chr5173039428173039533-intron-Distal3.107243.54222HepG2TAF15
chr5173037601173037659-intron-Distal3.667034.94813HepG2HNRNPM
chr5173041325173041404-intron-Distal4.397455.02084HepG2HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BOD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BOD1 is not available on ENCORE database.

  • 105 RBPs can affect the levels of BOD1.  








The Knockdown/knockout RNA-Seq assay for BOD1 is not available on ENCORE database.





105 RBPs can affect the gene expression of BOD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BOD1ENSG00000145919.6972.935801138.94810-0.227302.133901.58520HepG2ACO1
BOD1ENSG00000145919.61149.629402213.78690-0.9453012.1903011.15170HepG2AKAP1
BOD1ENSG00000145919.6926.441001287.76070-0.475103.434702.28150HepG2AKAP8
BOD1ENSG00000145919.6853.623501144.15980-0.422605.502604.45520HepG2AKAP8L
BOD1ENSG00000145919.61208.974801756.86470-0.5392010.403809.21290HepG2AUH
BOD1ENSG00000145919.6683.38790927.76740-0.441102.739801.80770HepG2BCCIP
BOD1ENSG00000145919.6566.431901086.81180-0.9401013.6700012.48180HepG2BOP1
BOD1ENSG00000145919.6980.732301138.53290-0.215202.065501.47930HepG2CKAP4
BOD1ENSG00000145919.6929.055701328.97430-0.516502.777102.01080HepG2CNOT7
BOD1ENSG00000145919.6640.50000997.74820-0.639506.389205.37780HepG2CPSF6
BOD1ENSG00000145919.61214.95330960.939100.338303.443302.30830HepG2YBX3
BOD1ENSG00000145919.61472.346001688.87520-0.197902.278301.59690HepG2DAZAP1
BOD1ENSG00000145919.6715.93070944.77870-0.400203.128902.41050HepG2DDX21
BOD1ENSG00000145919.61172.31890924.566800.342402.848801.91950HepG2DDX24
BOD1ENSG00000145919.6601.540102120.69720-1.8178045.1754042.93360HepG2DDX3X
BOD1ENSG00000145919.6515.65860912.20420-0.822907.782606.56370HepG2DDX55
BOD1ENSG00000145919.61030.443901821.58890-0.821909.392508.32640HepG2DDX6
BOD1ENSG00000145919.6769.40950943.47690-0.294202.377301.71960HepG2DNAJC21
BOD1ENSG00000145919.6756.23250935.28120-0.306601.951301.38590HepG2DNAJC2
BOD1ENSG00000145919.6670.784401112.02360-0.729307.700706.24550HepG2EEF2
BOD1ENSG00000145919.6442.88030927.06310-1.0658014.7533012.30570HepG2EFTUD2
BOD1ENSG00000145919.6844.154801751.27050-1.0528016.4085015.04600HepG2EIF2S1
BOD1ENSG00000145919.6616.33380902.73050-0.550603.838402.78440HepG2EIF3D
BOD1ENSG00000145919.61210.827601935.42400-0.676706.604405.61550HepG2EIF4A3
BOD1ENSG00000145919.6968.558901884.28420-0.9601010.042508.77310HepG2EIF4B
BOD1ENSG00000145919.6744.329701596.06170-1.1005020.3516018.30790HepG2EIF4G2
BOD1ENSG00000145919.61479.077802017.14310-0.447608.242807.29990HepG2ETF1
BOD1ENSG00000145919.6710.381201112.80700-0.647508.213406.78940HepG2EWSR1
BOD1ENSG00000145919.6572.44760806.78680-0.495004.842803.25820HepG2FAM120A
BOD1ENSG00000145919.61056.101301441.46480-0.448803.455702.60140HepG2FIP1L1
BOD1ENSG00000145919.61101.201301386.66640-0.332502.683501.90980HepG2FUBP3
BOD1ENSG00000145919.61169.143501952.56720-0.739909.255108.05680HepG2FXR1
BOD1ENSG00000145919.6654.106301811.39470-1.4695028.3842026.33570HepG2G3BP1
BOD1ENSG00000145919.6862.100801230.23010-0.513003.021701.85660HepG2GRSF1
BOD1ENSG00000145919.6690.55880952.51710-0.464003.825803.08440HepG2HNRNPA1
BOD1ENSG00000145919.61027.822501552.10220-0.5946011.174309.52750HepG2HNRNPA2B1
BOD1ENSG00000145919.6357.474501097.32710-1.6181025.0807021.02500HepG2HNRNPAB
BOD1ENSG00000145919.6850.821301059.54420-0.316502.130401.51280HepG2HNRNPC
BOD1ENSG00000145919.6904.074201833.96240-1.0205018.0665016.43130HepG2HNRNPK
BOD1ENSG00000145919.61153.477501538.45020-0.415507.535306.47110HepG2HNRNPL
BOD1ENSG00000145919.6473.984701079.34830-1.1872018.0856016.68250HepG2HNRNPLL
BOD1ENSG00000145919.6811.45200994.35450-0.293302.248501.39000HepG2HNRNPM
BOD1ENSG00000145919.6919.841001270.51790-0.466004.043603.18210HepG2IGF2BP1
BOD1ENSG00000145919.61092.964701841.27960-0.752509.293008.13690HepG2IGF2BP2
BOD1ENSG00000145919.6766.831101727.81480-1.172006.049604.62180HepG2IGF2BP3
BOD1ENSG00000145919.61148.306201851.94450-0.689505.977304.44740HepG2KHSRP
BOD1ENSG00000145919.61215.048201797.14400-0.564704.342903.29570HepG2LARP4
BOD1ENSG00000145919.6726.789601062.66780-0.548104.948703.31240HepG2LIN28B
BOD1ENSG00000145919.61238.144401953.24800-0.657707.249906.20280HepG2MAGOH
BOD1ENSG00000145919.6877.163201964.21180-1.1630018.0764016.57510HepG2MATR3
BOD1ENSG00000145919.6656.44200944.79970-0.525302.639001.61070HepG2METAP2
BOD1ENSG00000145919.6903.116201166.31870-0.369003.395702.50240HepG2MSI2
BOD1ENSG00000145919.6754.67770979.43600-0.376103.163401.86330HepG2NAA15
BOD1ENSG00000145919.6730.724302010.50570-1.4602029.1624027.26890HepG2NCBP2
BOD1ENSG00000145919.61315.546201674.68270-0.348203.911203.00470HepG2NOL12
BOD1ENSG00000145919.6956.334301359.99180-0.508005.279703.10410HepG2NUP35
BOD1ENSG00000145919.6902.881601790.60460-0.9878014.5887012.97100HepG2PABPC4
BOD1ENSG00000145919.61334.126201740.58050-0.383706.012405.17180HepG2PCBP1
BOD1ENSG00000145919.61166.60340938.770000.313401.986001.35330HepG2PPIL4
BOD1ENSG00000145919.61253.812501002.761700.322203.698402.81610HepG2PRPF4
BOD1ENSG00000145919.6244.99320703.60690-1.5220021.8406019.89840HepG2PRPF8
BOD1ENSG00000145919.61106.323301771.04280-0.6788015.9511014.84470HepG2PTBP1
BOD1ENSG00000145919.61485.950001696.98860-0.191602.177401.63840HepG2PUM1
BOD1ENSG00000145919.61243.171201695.75850-0.447905.671304.72330HepG2PUM2
BOD1ENSG00000145919.61206.420001918.21730-0.6690012.8670011.66330HepG2QKI
BOD1ENSG00000145919.6683.02540960.15550-0.491302.114501.49180HepG2RAVER1
BOD1ENSG00000145919.6897.037601740.85480-0.9566019.7349018.04330HepG2RBM25
BOD1ENSG00000145919.61136.896101971.05290-0.7939021.4503020.22430HepG2NELFE
BOD1ENSG00000145919.61400.144501835.67310-0.390706.216705.34370HepG2RECQL
BOD1ENSG00000145919.6662.65480943.41880-0.509602.707701.77370HepG2RPS10
BOD1ENSG00000145919.61182.19460937.303200.334802.536501.91540HepG2SAFB2
BOD1ENSG00000145919.6580.44070881.61440-0.603005.338904.04200HepG2SERBP1
BOD1ENSG00000145919.61106.769401843.99710-0.7365018.6506017.32990HepG2SF3B4
BOD1ENSG00000145919.61762.859401532.794400.201702.289001.64120HepG2SLBP
BOD1ENSG00000145919.6683.511601188.71230-0.798405.848604.70510HepG2SNRNP70
BOD1ENSG00000145919.61690.810101904.21140-0.171501.763801.33610HepG2SRFBP1
BOD1ENSG00000145919.6740.617201924.68760-1.3778058.5099056.96840HepG2SRSF1
BOD1ENSG00000145919.61021.771401267.57830-0.311003.218902.47430HepG2SRSF7
BOD1ENSG00000145919.61162.408801565.79620-0.429807.305006.48480HepG2SRSF9
BOD1ENSG00000145919.6645.63420973.08140-0.591807.070105.61700HepG2SUPT6H
BOD1ENSG00000145919.6677.45650908.06060-0.422702.660701.99590HepG2SUPV3L1
BOD1ENSG00000145919.62006.250801729.856500.213701.827701.35380HepG2TAF15
BOD1ENSG00000145919.61253.020801561.75740-0.317802.813901.93440HepG2TUFM
BOD1ENSG00000145919.6472.086001232.90370-1.3849027.1533025.12260HepG2U2AF1
BOD1ENSG00000145919.61241.998601653.07930-0.412502.961202.09700HepG2UBE2L3
BOD1ENSG00000145919.6253.59090536.40250-1.0808011.5931010.05790HepG2UCHL5
BOD1ENSG00000145919.6639.18210944.41150-0.563203.211801.84280HepG2XRCC5
BOD1ENSG00000145919.61179.84960893.886800.400302.606401.90250HepG2XRN2
BOD1ENSG00000145919.6717.85920989.59340-0.463106.553105.59150HepG2ZC3H8
BOD1ENSG00000145919.6604.00960415.931800.538105.403904.65260K562AGGF1
BOD1ENSG00000145919.6587.59500457.062700.362302.330501.44070K562AKAP8
BOD1ENSG00000145919.6586.11510432.799900.437403.047102.36090K562AKAP8L
BOD1ENSG00000145919.6589.22020460.682100.354901.934101.42740K562AQR
BOD1ENSG00000145919.6551.29110700.55060-0.345702.230801.35560K562CELF1
BOD1ENSG00000145919.6679.38620465.698100.544705.967704.61030K562DKC1
BOD1ENSG00000145919.6129.68180224.82280-0.793803.564102.09290K562EEF2
BOD1ENSG00000145919.6147.80670217.23080-0.555502.168001.36030K562EFTUD2
BOD1ENSG00000145919.6418.22190569.76370-0.446103.470802.42180K562EIF4G2
BOD1ENSG00000145919.6229.02030314.90770-0.459502.550101.45740K562GLRX3
BOD1ENSG00000145919.6215.66290367.11800-0.767503.654001.83080K562HNRNPAB
BOD1ENSG00000145919.6174.03410259.73460-0.577702.713302.12130K562HNRNPC
BOD1ENSG00000145919.6384.43660250.066200.620303.489502.43330K562HNRNPM
BOD1ENSG00000145919.6638.67220412.202900.631605.054703.99180K562HSPD1
BOD1ENSG00000145919.6217.38480317.59350-0.546902.938301.70320K562IGF2BP3
BOD1ENSG00000145919.6219.05980327.65650-0.580902.892601.94700K562MATR3
BOD1ENSG00000145919.6693.57650514.527900.430703.521902.47840K562MBNL1
BOD1ENSG00000145919.6378.53470607.31410-0.682005.558103.96160K562MSI2
BOD1ENSG00000145919.6272.81070367.85800-0.431202.811602.05930K562NSUN2
BOD1ENSG00000145919.6203.22470290.78070-0.516902.298601.54090K562PCBP3
BOD1ENSG00000145919.6142.06420223.03200-0.650703.242202.37060K562POLR2G
BOD1ENSG00000145919.6843.06750661.214900.350402.704801.65170K562PUM1
BOD1ENSG00000145919.6633.95620429.189600.562704.160003.51410K562PUS1
BOD1ENSG00000145919.6580.78490282.986901.037204.126802.57900K562SF1
BOD1ENSG00000145919.6224.01430312.63730-0.480902.262301.61410K562SRSF1
BOD1ENSG00000145919.6301.19880223.716200.428902.091701.37690K562SYNCRIP
BOD1ENSG00000145919.6171.14500316.46440-0.886804.901503.94580K562TARDBP
BOD1ENSG00000145919.6309.94160444.56490-0.520404.353002.75710K562TROVE2
BOD1ENSG00000145919.6100.16380216.62900-1.112906.454704.82310K562UCHL5
BOD1ENSG00000145919.6484.31970390.048300.312202.078501.44960K562UPF1
BOD1ENSG00000145919.6292.71930519.02690-0.826307.649806.09520K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BOD1 is not available on ENCORE database.





19 RBPs can affect the splicing of BOD1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBOD1ENSG00000145919.6chr5-1730365801730366731730363591730364371730401331730402580.109000.000950.02011includedK562SRSF1
SEBOD1ENSG00000145919.6chr5-173040133173040258173036359173036437173043202173043662-0.083000.000040.00118excludedHepG2U2AF1
SEBOD1ENSG00000145919.6chr5-173040133173040258173036359173036437173043202173043662-0.244000.000000.00017excludedK562AKAP8L
SEBOD1ENSG00000145919.6chr5-173040133173040258173036359173036437173043202173043662-0.133000.000000.00001excludedHepG2U2AF2
SEBOD1ENSG00000145919.6chr5-1730365801730366731730363591730364371730401331730402580.099000.000310.00455includedK562AQR
SEBOD1ENSG00000145919.6chr5-1730365801730366731730363591730364371730401331730402580.111000.000070.02116includedHepG2UCHL5
SEBOD1ENSG00000145919.6chr5-173040133173040258173036359173036437173043202173043662-0.413000.000000.00000excludedK562PUS1
SEBOD1ENSG00000145919.6chr5-1730362401730364371730348011730352951730401331730402580.055000.000100.00810includedHepG2SFPQ
SEBOD1ENSG00000145919.6chr5-173036240173036437173034801173035295173043202173043361-0.059000.000660.03660excludedHepG2PTBP1
SEBOD1ENSG00000145919.6chr5-173036240173036437173034801173035295173043202173043361-0.063000.000220.02016excludedHepG2HNRNPL
SEBOD1ENSG00000145919.6chr5-173036240173036437173034801173035295173040133173040258-0.060000.000200.00678excludedHepG2SRSF1
SEBOD1ENSG00000145919.6chr5-1730365801730366731730363591730364371730401331730402580.117000.000000.00000includedHepG2BCCIP
SEBOD1ENSG00000145919.6chr5-173036240173036437173034801173035295173043202173043361-0.067000.000060.02465excludedHepG2NOL12
SEBOD1ENSG00000145919.6chr5-1730365801730366731730363591730364371730401331730402580.124000.000150.02935includedK562RBM22
SEBOD1ENSG00000145919.6chr5-173040133173040258173036359173036437173043202173043662-0.239000.000320.01427excludedK562UTP18
SEBOD1ENSG00000145919.6chr5-1730365801730366731730363591730364371730401331730402580.185000.000080.00508includedK562TARDBP
SEBOD1ENSG00000145919.6chr5-173040133173040258173036359173036437173043202173043662-0.126000.002140.04828excludedK562RBM15
SEBOD1ENSG00000145919.6chr5-173040133173040258173036359173036437173043202173043662-0.114000.003350.06908excludedK562AGGF1
SEBOD1ENSG00000145919.6chr5-1730365801730366731730363591730364371730401331730402580.079000.000000.00214includedHepG2DDX55
SEBOD1ENSG00000145919.6chr5-173036240173036437173034801173035295173040133173040258-0.052000.000260.01327excludedHepG2HNRNPC
SEBOD1ENSG00000145919.6chr5-1730365801730366731730363591730364371730401331730402580.096000.002030.06810includedK562PTBP1
A3SSBOD1ENSG00000145919.6chr5-1730362401730364871730362401730364371730401331730402580.100000.005790.03287longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BOD1 is not avaliable on ENCORE database.