ALDH16A1

General Information

Gene Name       : ALDH16A1
Gene ID             : ENSG00000161618.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ALDH16A1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ALDH16A1ENSG00000161618.90.271.140.70ENCSR000AEF
HepG2ALDH16A1ENSG00000161618.923.361.2912.32ENCSR985KAT
K562ALDH16A1ENSG00000161618.96.411.463.94ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ALDH16A1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ALDH16A1 RNA is bound by 15 proteins.  







eCLIP assay for ALDH16A1 is not avaliable on ENCORE database.





15 proteins are bound to ALDH16A1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr194996582749965907+3'-UTR,CDS4.455384.68296HepG2GRSF1
chr194996587149966005+3'-UTR,CDS4.212859.86479HepG2PPIG
chr194996774649967779+3'-UTR,CDS4.072744.13746HepG2PPIG
chr194997212049972210+3'-UTR,CDS,intron-Distal,intron-Proximal3.384415.30777HepG2PPIG
chr194996587249965984+3'-UTR,CDS4.622807.15341HepG2RPS3
chr194996933649969381+3'-UTR,CDS,intron-Distal,intron-Proximal3.960775.24452HepG2PPIG
chr194996951349969656+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.400335.13777HepG2PRPF8
chr194996798649968016+3'-UTR,5'-UTR,CDS4.729435.86613HepG2PPIG
chr194996592149966013+3'-UTR,CDS,intron-Proximal3.266953.50786HepG2G3BP1
chr194996908949969164+3'-UTR,CDS,intron-Distal,intron-Proximal3.747106.98305HepG2PPIG
chr194996590749966009+3'-UTR,CDS3.389154.56648HepG2GRSF1
chr194997177149971815+3'-UTR,CDS,intron-Distal3.196223.73413HepG2PPIG
chr194996586249965975+3'-UTR,CDS5.539707.63756K562DDX24
chr194996743649967519+3'-UTR,CDS,intron-Distal5.171264.97342HepG2PPIG
chr194996712149967204+3'-UTR,CDS5.428507.00086K562DDX24
chr194996519049965298+3'-UTR,CDS,intron-Distal,intron-Proximal3.335283.74534K562SRSF1
chr194996298549963086+5'-UTR,CDS,intron-Distal4.347184.83675HepG2G3BP1
chr194996504649965119+5'-UTR,CDS,intron-Proximal3.896234.50192K562FAM120A
chr194996494349965027+5'-UTR,CDS4.635149.51301K562GTF2F1
chr194996483249964902+5'-UTR,CDS,intron-Proximal4.245364.94603K562CSTF2T
chr194996491949964974+5'-UTR,CDS4.649046.36475K562CSTF2T
chr194996483649964911+5'-UTR,CDS,intron-Proximal3.515198.11126HepG2PRPF8
chr194996490149965035+5'-UTR,CDS3.127144.26519K562PRPF8
chr194996304549963104+5'-UTR,CDS,intron-Distal4.078997.83545HepG2PPIG
chr194996494149965022+5'-UTR,CDS4.8294913.14151K562EWSR1
chr194996495649965041+5'-UTR,CDS3.909926.40661K562FAM120A
chr194996479449964903+5'-UTR,CDS,intron-Proximal3.633664.75223HepG2RBFOX2
chr194996484349964903+5'-UTR,CDS,intron-Proximal4.168107.47553K562FAM120A
chr194996297049963045+5'-UTR,CDS,intron-Distal3.649947.09278HepG2PPIG
chr194996504349965125+5'-UTR,CDS,intron-Proximal4.533735.81141K562CSTF2T
chr194996484449964910+5'-UTR,CDS,intron-Proximal3.288495.33732K562AKAP8L
chr194996504949965132+5'-UTR,CDS,intron-Proximal5.372479.49287HepG2CSTF2T
chr194996494649965022+5'-UTR,CDS4.7043513.84372K562AKAP8L
chr194996486749964978+5'-UTR,CDS,intron-Proximal3.815803.52365K562FUS
chr194996499949965026+5'-UTR,CDS4.358964.57154HepG2FAM120A
chr194996416149964276+intron-Distal,intron-Proximal3.483393.91614K562BUD13
chr194996416949964274+intron-Distal,intron-Proximal4.3436910.65745K562GTF2F1
chr194996453649964582+intron-Distal4.197766.37070K562EWSR1
chr194996416449964290+intron-Distal,intron-Proximal3.405555.57084HepG2RBFOX2
chr194996431249964368+intron-Distal4.195176.28577HepG2FAM120A
chr194996453349964583+intron-Distal4.556067.20259K562GTF2F1
chr194996431249964361+intron-Distal3.942353.69819HepG2CSTF2T
chr194996431649964359+intron-Distal3.928525.10007K562FAM120A
chr194996454049964567+intron-Distal4.152253.38753K562FAM120A
chr194996452949964582+intron-Distal4.2342713.53855K562AKAP8L
chr194996454049964564+intron-Distal4.219363.44758HepG2CSTF2T
chr194996417449964273+intron-Distal,intron-Proximal4.7145311.71046K562EWSR1
chr194996431249964367+intron-Distal5.444867.33617K562GTF2F1
chr194996453349964586+intron-Distal4.022889.07337HepG2FAM120A
chr194996432049964362+intron-Distal4.050493.02711K562EWSR1
chr194996431349964369+intron-Distal5.183866.56385K562AKAP8L
chr194996418449964237+intron-Proximal3.237664.23595K562AKAP8L
chr194996415649964250+intron-Proximal4.0738712.15962HepG2CSTF2T
chr194996481549964859+intron-Proximal3.738104.21158HepG2CSTF2T
chr194996479649964868+intron-Proximal5.348547.33617K562GTF2F1
chr194996480849964843+intron-Proximal5.172577.71000K562FAM120A
chr194996479349964867+intron-Proximal4.204028.27535HepG2FAM120A
chr194996416749964247+intron-Proximal4.722467.20000K562CSTF2T
chr194996482549964868+intron-Proximal4.388764.14056K562EWSR1
chr194996480249964844+intron-Proximal4.087884.99833K562AKAP8L
chr194996417149964229+intron-Proximal4.727445.15564HepG2FAM120A
chr194996416949964250+intron-Proximal5.7364510.53672K562FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ALDH16A1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ALDH16A1 is not available on ENCORE database.

  • 85 RBPs can affect the levels of ALDH16A1.  








The Knockdown/knockout RNA-Seq assay for ALDH16A1 is not available on ENCORE database.





85 RBPs can affect the gene expression of ALDH16A1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ALDH16A1ENSG00000161618.5421.53900570.53860-0.436704.038103.32950HepG2ACO1
ALDH16A1ENSG00000161618.5466.04350279.151600.739302.457401.95330HepG2AKAP1
ALDH16A1ENSG00000161618.5425.30270573.17200-0.430503.732902.85510HepG2AKAP8L
ALDH16A1ENSG00000161618.5114.27160205.47920-0.846502.422201.69690HepG2CALR
ALDH16A1ENSG00000161618.5411.86230527.64040-0.357402.935502.07840HepG2DDX19B
ALDH16A1ENSG00000161618.5393.04510267.346500.555902.473201.87840HepG2DDX3X
ALDH16A1ENSG00000161618.5122.57290234.38550-0.935202.899401.89780HepG2DDX59
ALDH16A1ENSG00000161618.5198.18430100.212400.983706.891905.92810HepG2DNAJC2
ALDH16A1ENSG00000161618.5377.49800557.46790-0.562404.652403.57460HepG2EWSR1
ALDH16A1ENSG00000161618.5253.30570380.27680-0.586202.568601.82400HepG2FIP1L1
ALDH16A1ENSG00000161618.5152.20600258.37950-0.763504.317403.34710HepG2FUBP3
ALDH16A1ENSG00000161618.5489.28080246.297800.990205.643404.67760HepG2FXR1
ALDH16A1ENSG00000161618.5346.91350231.495600.583502.845802.13680HepG2HNRNPK
ALDH16A1ENSG00000161618.5182.08890112.789600.690903.513002.83820HepG2HNRNPU
ALDH16A1ENSG00000161618.5266.33350189.960500.487402.302301.64000HepG2IGF2BP1
ALDH16A1ENSG00000161618.5130.4765058.700301.152304.678503.07140HepG2KHDRBS1
ALDH16A1ENSG00000161618.5560.35970246.384701.1853012.3774011.02710HepG2MAGOH
ALDH16A1ENSG00000161618.5163.75930258.40130-0.658003.869402.43170HepG2NAA15
ALDH16A1ENSG00000161618.5357.45340200.496700.834107.251506.02900HepG2NOL12
ALDH16A1ENSG00000161618.5502.23670159.001301.659205.122403.61230HepG2NONO
ALDH16A1ENSG00000161618.5141.2816056.327101.326605.233603.98480HepG2PABPC1
ALDH16A1ENSG00000161618.5215.40620100.599501.098308.003806.79950HepG2PPIL4
ALDH16A1ENSG00000161618.5134.97860256.37850-0.925502.746201.97460HepG2PRPF4
ALDH16A1ENSG00000161618.5380.41300251.922600.594503.164502.58700HepG2PTBP1
ALDH16A1ENSG00000161618.5349.45130191.392800.868502.417601.85480HepG2PUF60
ALDH16A1ENSG00000161618.5414.51470203.173401.0286013.5152012.41250HepG2PUM1
ALDH16A1ENSG00000161618.5303.01590424.76900-0.487303.248502.32700HepG2RBM15
ALDH16A1ENSG00000161618.5364.23350151.709601.263504.786403.46250HepG2RBM27
ALDH16A1ENSG00000161618.5380.51620280.345000.440702.556202.03340HepG2NELFE
ALDH16A1ENSG00000161618.5424.84230261.140800.702004.815204.03130HepG2RECQL
ALDH16A1ENSG00000161618.5125.84050207.83850-0.723903.316302.57880HepG2RPLP0
ALDH16A1ENSG00000161618.5331.64780139.883701.245305.106004.03950HepG2RPS2
ALDH16A1ENSG00000161618.5183.0494061.863101.565008.804807.40700HepG2RPS3A
ALDH16A1ENSG00000161618.5287.62060100.444701.517707.111406.14670HepG2SAFB2
ALDH16A1ENSG00000161618.5126.8275058.255801.122304.281302.66050HepG2SART3
ALDH16A1ENSG00000161618.5137.23160220.95260-0.687102.513101.83870HepG2SF3B1
ALDH16A1ENSG00000161618.5355.33120183.518900.9531010.036208.83060HepG2SLBP
ALDH16A1ENSG00000161618.5164.30180117.136300.488101.893001.34370HepG2SMN1
ALDH16A1ENSG00000161618.5145.86560245.85600-0.753202.835902.04590HepG2SNRNP70
ALDH16A1ENSG00000161618.5209.96230650.95060-1.6324029.8454028.65470HepG2SRFBP1
ALDH16A1ENSG00000161618.5149.12520273.73930-0.876305.728605.10960HepG2SRSF1
ALDH16A1ENSG00000161618.5351.64800188.974300.895808.561107.53730HepG2SRSF5
ALDH16A1ENSG00000161618.594.83150222.71720-1.231809.379208.46840HepG2SRSF9
ALDH16A1ENSG00000161618.5134.6379053.803601.323206.413504.67150HepG2STIP1
ALDH16A1ENSG00000161618.5457.25000214.914301.0891015.0471013.78590HepG2SUCLG1
ALDH16A1ENSG00000161618.5112.49330246.09810-1.129406.832906.02030HepG2TAF15
ALDH16A1ENSG00000161618.5148.24230226.07700-0.608902.967902.10470HepG2TIA1
ALDH16A1ENSG00000161618.5259.04940110.575701.228106.279405.49160HepG2TRIM56
ALDH16A1ENSG00000161618.5419.50490186.985101.1657012.4705010.41970HepG2TUFM
ALDH16A1ENSG00000161618.5401.85880197.922301.021702.469201.68220HepG2UBE2L3
ALDH16A1ENSG00000161618.5153.6998055.409301.471807.592205.77830HepG2XPO5
ALDH16A1ENSG00000161618.5216.72930441.58840-1.026809.737208.86840HepG2ZNF622
ALDH16A1ENSG00000161618.5761.73050502.418400.600307.716406.83610K562AGGF1
ALDH16A1ENSG00000161618.5820.59740552.114100.571602.735701.76010K562AKAP8
ALDH16A1ENSG00000161618.5891.19850522.797100.769408.305507.11260K562AKAP8L
ALDH16A1ENSG00000161618.51055.93990759.026300.476204.057802.50430K562APOBEC3C
ALDH16A1ENSG00000161618.5556.97640889.67760-0.675705.874305.07490K562AQR
ALDH16A1ENSG00000161618.5788.92280548.555000.524106.088804.66560K562ATP5C1
ALDH16A1ENSG00000161618.5538.29330248.665201.114104.281803.06960K562BCLAF1
ALDH16A1ENSG00000161618.5255.89480171.697700.575602.822901.52840K562CIRBP
ALDH16A1ENSG00000161618.5729.58240568.847800.358903.020901.86160K562CPEB4
ALDH16A1ENSG00000161618.5419.23760188.649801.152004.895603.43180K562CSTF2
ALDH16A1ENSG00000161618.5763.499501058.02330-0.470702.426501.51530K562CELF1
ALDH16A1ENSG00000161618.5972.46850481.142101.0151018.3200016.70460K562EIF2S2
ALDH16A1ENSG00000161618.5532.96780408.782600.382602.811201.64300K562EIF4B
ALDH16A1ENSG00000161618.51287.27960860.249900.581405.801004.46330K562EIF4G2
ALDH16A1ENSG00000161618.5408.59490304.922300.422102.332801.55500K562FIP1L1
ALDH16A1ENSG00000161618.5362.87310472.07280-0.379502.501701.92010K562FXR1
ALDH16A1ENSG00000161618.522.0217064.83670-1.557904.148303.24110K562G3BP2
ALDH16A1ENSG00000161618.5161.74000250.83880-0.633102.449001.57630K562HNRNPM
ALDH16A1ENSG00000161618.5383.72610160.263501.259502.190701.30700K562IGF2BP2
ALDH16A1ENSG00000161618.5284.09010162.984000.801505.646803.83500K562IGF2BP3
ALDH16A1ENSG00000161618.583.74750159.83130-0.932403.380902.33680K562KRR1
ALDH16A1ENSG00000161618.5243.85530168.367000.534302.593901.77860K562MAGOH
ALDH16A1ENSG00000161618.5434.44440656.72360-0.596105.030103.96590K562MTPAP
ALDH16A1ENSG00000161618.5197.78680453.30000-1.1965014.4186011.76890K562NCBP2
ALDH16A1ENSG00000161618.5442.96270224.630800.979503.765502.20480K562NONO
ALDH16A1ENSG00000161618.5151.29740407.14570-1.4282014.1676012.31770K562PCBP3
ALDH16A1ENSG00000161618.5101.23680312.29110-1.6252017.5204015.60430K562POLR2G
ALDH16A1ENSG00000161618.5475.50360346.198900.457802.855702.02080K562PPIG
ALDH16A1ENSG00000161618.5272.90080163.583900.738204.920604.05910K562PTBP1
ALDH16A1ENSG00000161618.5620.76230998.56860-0.685809.387707.35100K562PUM1
ALDH16A1ENSG00000161618.5649.15840505.163900.361702.540701.96890K562RBM15
ALDH16A1ENSG00000161618.5309.86430156.822700.982407.903906.38940K562RBM22
ALDH16A1ENSG00000161618.5322.44900211.723300.606802.991401.95900K562RCC2
ALDH16A1ENSG00000161618.5461.75330720.02310-0.640908.075406.74250K562SF3A3
ALDH16A1ENSG00000161618.5176.7557067.337301.392209.512807.87840K562SF3B4
ALDH16A1ENSG00000161618.5528.79790737.68360-0.480305.506904.24240K562SRPK2
ALDH16A1ENSG00000161618.5228.24450134.864700.759003.584502.36380K562SRSF4
ALDH16A1ENSG00000161618.5313.32220151.478701.048408.683006.72700K562SRSF5
ALDH16A1ENSG00000161618.5553.93560162.293501.7710027.6789024.96940K562TARDBP
ALDH16A1ENSG00000161618.5409.51960156.554401.3872016.8937014.72960K562TIA1
ALDH16A1ENSG00000161618.5339.92540153.662801.145305.990304.23700K562TRA2A
ALDH16A1ENSG00000161618.5783.759101058.42520-0.433402.708101.32250K562UBE2L3
ALDH16A1ENSG00000161618.5420.68670688.42580-0.7106010.550709.02460K562WDR43
ALDH16A1ENSG00000161618.5198.92220429.62760-1.110903.063701.37640K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ALDH16A1 is not available on ENCORE database.





8 RBPs can affect the splicing of ALDH16A1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEALDH16A1ENSG00000161618.5chr19+499673834996752049967110499672064996767349967779-0.194000.000080.00148excludedK562AQR
A3SSALDH16A1ENSG00000161618.5chr19+499648754996529349965140499652934996404149964156-0.210000.003870.02308shorterK562AQR
A5SSALDH16A1ENSG00000161618.5chr19+4997212049972341499721204997224349973562499738440.231000.000110.00280longerK562AQR
A5SSALDH16A1ENSG00000161618.5chr19+4996711949967284499671194996720649967383499675200.090000.004480.06614longerK562AQR
RIALDH16A1ENSG00000161618.5chr19+4996487549965293499648754996505749965140499652930.209000.009320.08108includedHepG2SF3A3
RIALDH16A1ENSG00000161618.5chr19+4996487549965293499648754996505749965140499652930.644000.000390.01155includedHepG2SRSF1
RIALDH16A1ENSG00000161618.5chr19+4996487549965293499648754996505749965140499652930.497000.002640.02666includedHepG2U2AF1
RIALDH16A1ENSG00000161618.5chr19+4996487549965293499648754996505749965140499652930.195000.000410.00611includedHepG2RBM22
RIALDH16A1ENSG00000161618.5chr19+4996487549965293499648754996505749965140499652930.167000.008960.08125includedK562UTP18
RIALDH16A1ENSG00000161618.5chr19+4996487549965293499648754996505749965140499652930.318000.000000.00002includedK562AQR
MXEALDH16A1ENSG00000161618.5chr19+4996487549965057499651444996529349964041499641564996582649966012-0.272000.000310.003252includedK562AQR
MXEALDH16A1ENSG00000161618.5chr19+4996487549965057499651404996529349964078499641564996582649966012-0.274000.000250.002712includedK562AQR
MXEALDH16A1ENSG00000161618.5chr19+4996487549965057499651404996529349964078499641564996582649966012-0.365000.000830.032132includedHepG2SF3A3
MXEALDH16A1ENSG00000161618.5chr19+49964875499650574996514049965293499640784996415649965826499660120.258000.003540.069121includedK562SBDS
MXEALDH16A1ENSG00000161618.5chr19+49964875499650574996514049965293499640784996415649965826499660120.313000.003590.069471includedK562PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ALDH16A1 is not avaliable on ENCORE database.