AGFG1

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	AGFG1	ENSG00000173744.17	49.49	65.57	57.53	ENCSR000AEF
HepG2	AGFG1	ENSG00000173744.17	77.22	98.07	87.64	ENCSR985KAT
K562	AGFG1	ENSG00000173744.17	25.52	24.21	24.87	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	AGFG1-BGKcLV26-K562	ENCSR654SOD	AGFG1	K562	Released		ENCSR900GQL	CRISPR	KD% = 70.6,66.5
knockdown followed by RNA-seq	AGFG1-BGHcLV25-HepG2	ENCSR892ZGW	AGFG1	HepG2	Released		ENCSR953VMB	CRISPR	KD% = 96.2,96.8

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
AGFG1	ENCAB794UUE	A301-792A	1			Released, ENCODE4	BGHcLV25-19, Released, ENCODE4	BGKcLV26-15, Released, ENCODE4

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
AGFG1	K562	CRISPR	ENCSR654SOD	ENCSR900GQL	AGFG1-BGKcLV26-15,AGFG1-BGKcLV26-16	NT-BGKcLV26-1,NT-BGKcLV26-2	70.6,66.5	Released	ENCODE4
AGFG1	HepG2	CRISPR	ENCSR892ZGW	ENCSR953VMB	AGFG1-BGHcLV25-19,AGFG1-BGHcLV25-20	NT-BGHcLV25-1,NT-BGHcLV25-2	96.2,96.8	Released	ENCODE4

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AGFG1 is not avaliable on ENCORE database.

Proteins bound to RNA

AGFG1 RNA is bound by 36 proteins.

eCLIP assay for AGFG1 is not avaliable on ENCORE database.

36 proteins are bound to AGFG1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	228419469	228419549	+	3'-UTR	4.27333	20.67847	K562	PUM2
chr2	228419247	228419315	+	3'-UTR	4.16559	3.27788	HepG2	IGF2BP3
chr2	228419246	228419292	+	3'-UTR	3.29502	3.38325	HepG2	IGF2BP1
chr2	228336873	228336984	+	5'-UTR	3.69755	20.62819	HepG2	NCBP2
chr2	228337074	228337161	+	5'-UTR,CDS	3.18898	10.99870	HepG2	DDX3X
chr2	228336984	228337074	+	5'-UTR	3.86027	26.47664	HepG2	DDX3X
chr2	228336885	228336984	+	5'-UTR	5.43656	24.71130	HepG2	DDX3X
chr2	228398306	228398405	+	CDS	5.82956	17.16175	K562	IGF2BP1
chr2	228337185	228337233	+	CDS	3.38977	4.27261	HepG2	GRWD1
chr2	228384751	228384779	+	CDS	4.99678	6.37937	HepG2	BCLAF1
chr2	228416673	228416703	+	CDS,intron-Proximal	3.09638	6.33847	K562	IGF2BP2
chr2	228399546	228399633	+	CDS,intron-Proximal	3.41585	21.33502	HepG2	U2AF2
chr2	228416808	228416833	+	CDS	4.56028	4.08466	HepG2	IGF2BP1
chr2	228388495	228388520	+	CDS	5.47943	11.01435	K562	LIN28B
chr2	228419150	228419169	+	CDS,intron-Proximal	3.31478	3.38325	HepG2	IGF2BP1
chr2	228388477	228388576	+	CDS,intron-Proximal	5.61115	8.76192	HepG2	LIN28B
chr2	228395784	228395843	+	CDS,intron-Distal,intron-Proximal	3.16997	12.40475	HepG2	U2AF2
chr2	228418451	228418497	+	CDS	3.28203	7.22857	HepG2	PRPF8
chr2	228399543	228399600	+	CDS,intron-Proximal	3.16178	7.07421	HepG2	BUD13
chr2	228401616	228401632	+	CDS,intron-Proximal	3.02564	3.07714	K562	YBX3
chr2	228388529	228388579	+	CDS	4.07674	3.83024	HepG2	IGF2BP1
chr2	228418497	228418521	+	CDS,intron-Proximal	3.64851	10.05760	HepG2	PRPF8
chr2	228419170	228419198	+	CDS	3.45759	3.85040	HepG2	IGF2BP1
chr2	228389603	228389684	+	CDS,intron-Proximal	5.57138	7.46483	HepG2	PRPF8
chr2	228416772	228416834	+	CDS,intron-Proximal	4.85494	8.02776	K562	IGF2BP2
chr2	228396827	228396873	+	CDS,intron-Distal,intron-Proximal	3.47192	3.80334	HepG2	U2AF2
chr2	228401392	228401461	+	CDS,intron-Proximal	5.23312	12.15723	HepG2	PRPF8
chr2	228395768	228395826	+	CDS,intron-Distal,intron-Proximal	4.82468	3.91589	K562	SF3B4
chr2	228388469	228388520	+	CDS,intron-Proximal	3.03141	6.45317	HepG2	U2AF2
chr2	228401383	228401422	+	CDS,intron-Proximal	3.22037	4.27261	HepG2	GRWD1
chr2	228416775	228416800	+	CDS	3.74525	3.06406	HepG2	IGF2BP1
chr2	228416756	228416811	+	CDS	3.55820	4.29472	K562	IGF2BP1
chr2	228388477	228388495	+	CDS,intron-Proximal	3.85893	3.06853	K562	LIN28B
chr2	228395904	228395961	+	CDS,intron-Distal,intron-Proximal	3.58048	6.87008	HepG2	PRPF8
chr2	228419146	228419195	+	CDS,intron-Proximal	3.06883	3.52329	HepG2	U2AF1
chr2	228399558	228399595	+	CDS,intron-Proximal	3.03569	4.05271	HepG2	PPIG
chr2	228395901	228395960	+	CDS,intron-Distal,intron-Proximal	3.17691	3.20886	K562	PRPF8
chr2	228418419	228418450	+	CDS,intron-Proximal	3.19961	3.85853	K562	IGF2BP2
chr2	228416811	228416833	+	CDS	4.82813	5.54754	K562	IGF2BP1
chr2	228418460	228418501	+	CDS	4.14783	4.50986	K562	IGF2BP1
chr2	228388494	228388620	+	CDS	3.71466	3.02618	HepG2	UCHL5
chr2	228398251	228398294	+	CDS,intron-Proximal	3.25029	5.79202	HepG2	U2AF2
chr2	228418419	228418460	+	CDS,intron-Proximal	5.12417	7.84269	K562	IGF2BP1
chr2	228416615	228416680	+	CDS,intron-Proximal	3.37356	5.90314	HepG2	KHSRP
chr2	228401662	228401709	+	CDS	4.07688	4.31428	K562	YBX3
chr2	228389469	228389529	+	CDS,intron-Proximal	3.18644	9.84254	HepG2	U2AF2
chr2	228401330	228401393	+	CDS,intron-Proximal	3.25034	8.26986	HepG2	U2AF2
chr2	228418419	228418450	+	CDS,intron-Proximal	3.40622	3.38325	HepG2	IGF2BP1
chr2	228384694	228384751	+	CDS	4.63086	8.80935	HepG2	BCLAF1
chr2	228401346	228401411	+	CDS	4.13651	6.39364	HepG2	PPIG
chr2	228388520	228388582	+	CDS	6.40408	24.54477	K562	LIN28B
chr2	228388475	228388514	+	CDS,intron-Proximal	3.32282	5.79905	HepG2	BCLAF1
chr2	228406744	228406802	+	intron-Distal	6.31633	21.01239	K562	EXOSC5
chr2	228407114	228407162	+	intron-Distal	3.90727	6.18699	HepG2	MATR3
chr2	228388832	228388935	+	intron-Distal	3.96851	11.99390	K562	KHSRP
chr2	228409647	228409683	+	intron-Distal	4.53602	5.01910	HepG2	MATR3
chr2	228368142	228368187	+	intron-Distal	4.16119	4.86210	HepG2	HNRNPM
chr2	228337401	228337499	+	intron-Distal,intron-Proximal	4.43383	10.60129	HepG2	PRPF4
chr2	228414303	228414387	+	intron-Distal	4.69368	13.10935	HepG2	KHSRP
chr2	228337674	228337762	+	intron-Distal	4.98421	8.06849	HepG2	PRPF4
chr2	228392671	228392726	+	intron-Distal	3.19228	4.89227	HepG2	KHSRP
chr2	228402806	228402900	+	intron-Distal	4.52800	9.85516	K562	KHSRP
chr2	228408283	228408341	+	intron-Distal	3.95721	3.63454	HepG2	SUGP2
chr2	228396321	228396369	+	intron-Distal	3.49505	6.25191	HepG2	HNRNPC
chr2	228392011	228392114	+	intron-Distal	4.18664	9.04688	HepG2	HNRNPL
chr2	228407460	228407553	+	intron-Distal	4.23423	12.31493	HepG2	MATR3
chr2	228409527	228409568	+	intron-Distal	3.38407	3.84025	HepG2	SUGP2
chr2	228410354	228410413	+	intron-Distal	4.21454	3.89080	K562	EXOSC5
chr2	228337347	228337489	+	intron-Distal,intron-Proximal	3.43765	13.31811	HepG2	CSTF2T
chr2	228338019	228338098	+	intron-Distal	4.40960	3.80314	K562	CSTF2T
chr2	228401226	228401265	+	intron-Distal,intron-Proximal	4.29944	4.83283	HepG2	KHSRP
chr2	228409284	228409340	+	intron-Distal	3.38979	4.02190	K562	EXOSC5
chr2	228369653	228369720	+	intron-Distal	4.38609	4.31871	HepG2	HNRNPM
chr2	228414547	228414617	+	intron-Distal	4.13489	12.61975	HepG2	U2AF2
chr2	228337348	228337485	+	intron-Distal,intron-Proximal	5.68163	13.71877	HepG2	GTF2F1
chr2	228394874	228395003	+	intron-Distal	3.37547	7.25305	K562	KHSRP
chr2	228408356	228408432	+	intron-Distal	5.17210	6.62827	HepG2	SUGP2
chr2	228352461	228352535	+	intron-Distal	3.95689	3.29554	HepG2	GTF2F1
chr2	228407459	228407545	+	intron-Distal	4.63762	4.49973	K562	MATR3
chr2	228410053	228410088	+	intron-Distal	4.09730	3.01445	K562	EXOSC5
chr2	228337814	228337858	+	intron-Distal	4.56334	7.41879	HepG2	FAM120A
chr2	228409522	228409564	+	intron-Distal	4.56324	5.01910	HepG2	MATR3
chr2	228337368	228337516	+	intron-Distal,intron-Proximal	5.27485	15.32029	HepG2	EFTUD2
chr2	228393147	228393206	+	intron-Distal	3.47848	5.79202	HepG2	U2AF2
chr2	228356147	228356210	+	intron-Distal,intron-Proximal	3.81662	3.02234	K562	KHSRP
chr2	228404203	228404268	+	intron-Distal	3.31852	3.58557	HepG2	ILF3
chr2	228392648	228392736	+	intron-Distal	3.92782	11.34880	K562	KHSRP
chr2	228416563	228416655	+	intron-Distal,intron-Proximal	3.00685	3.87053	K562	KHSRP
chr2	228337402	228337434	+	intron-Distal,intron-Proximal	4.24502	10.89942	HepG2	FAM120A
chr2	228388697	228388763	+	intron-Distal,intron-Proximal	4.18581	10.09547	HepG2	KHSRP
chr2	228392599	228392640	+	intron-Distal	4.48556	5.37430	HepG2	KHSRP
chr2	228337578	228337627	+	intron-Distal	4.63617	5.63094	K562	GTF2F1
chr2	228407856	228407887	+	intron-Distal	3.45725	3.72904	K562	EXOSC5
chr2	228403230	228403322	+	intron-Distal	4.12099	7.97263	HepG2	KHSRP
chr2	228337579	228337634	+	intron-Distal	3.10078	3.41957	K562	DROSHA
chr2	228393437	228393498	+	intron-Distal	5.35106	7.35412	HepG2	TIAL1
chr2	228393784	228393823	+	intron-Distal	4.21915	8.77242	HepG2	U2AF2
chr2	228392052	228392145	+	intron-Distal	3.29739	4.23794	K562	HNRNPL
chr2	228407120	228407187	+	intron-Distal	4.32570	5.04879	HepG2	SUGP2
chr2	228362158	228362311	+	intron-Distal	3.76575	7.77652	K562	QKI
chr2	228407481	228407550	+	intron-Distal	6.70698	25.71745	K562	EXOSC5
chr2	228414627	228414685	+	intron-Distal,intron-Proximal	4.89928	7.83372	K562	KHSRP
chr2	228402897	228402961	+	intron-Distal	4.72810	6.41805	HepG2	KHSRP
chr2	228416516	228416590	+	intron-Distal,intron-Proximal	4.67284	4.85866	HepG2	QKI
chr2	228407496	228407551	+	intron-Distal	5.02675	8.16055	HepG2	SUGP2
chr2	228408380	228408430	+	intron-Distal	4.90379	7.06134	K562	EXOSC5
chr2	228414983	228415060	+	intron-Distal	3.51777	4.10408	K562	KHSRP
chr2	228416222	228416272	+	intron-Distal	3.06351	4.25713	HepG2	U2AF2
chr2	228408371	228408435	+	intron-Distal	4.56440	3.27946	HepG2	HNRNPM
chr2	228406753	228406798	+	intron-Distal	4.35089	3.60235	HepG2	HNRNPM
chr2	228389734	228389782	+	intron-Distal	4.36149	8.24227	HepG2	KHSRP
chr2	228390566	228390602	+	intron-Distal	3.31945	3.56114	HepG2	KHSRP
chr2	228390126	228390229	+	intron-Distal	4.23915	14.40177	K562	HNRNPL
chr2	228409080	228409146	+	intron-Distal	4.45725	4.48560	K562	EXOSC5
chr2	228392168	228392231	+	intron-Distal	3.32965	4.13620	K562	KHSRP
chr2	228378256	228378357	+	intron-Distal	4.53105	11.12558	HepG2	QKI
chr2	228407852	228407891	+	intron-Distal	4.90103	7.35807	HepG2	MATR3
chr2	228408579	228408627	+	intron-Distal	3.73819	3.72904	K562	EXOSC5
chr2	228337434	228337499	+	intron-Distal	4.59419	17.52868	HepG2	FAM120A
chr2	228400539	228400626	+	intron-Distal	3.95314	3.37809	K562	HNRNPL
chr2	228338577	228338644	+	intron-Distal	3.24767	3.11000	HepG2	HNRNPM
chr2	228388337	228388366	+	intron-Distal	3.90158	3.02234	K562	KHSRP
chr2	228374990	228375024	+	intron-Distal	5.08243	6.98111	K562	AGGF1
chr2	228393385	228393491	+	intron-Distal	4.82078	10.71900	HepG2	KHSRP
chr2	228337563	228337645	+	intron-Distal	4.74642	15.92449	HepG2	FAM120A
chr2	228410359	228410428	+	intron-Distal	3.14722	3.04190	HepG2	MATR3
chr2	228409887	228409963	+	intron-Distal	4.52826	3.98115	K562	MATR3
chr2	228409668	228409724	+	intron-Distal	3.75880	5.30446	HepG2	SUGP2
chr2	228409883	228409930	+	intron-Distal	3.08223	3.85511	HepG2	MATR3
chr2	228337821	228337858	+	intron-Distal	3.50098	4.72700	HepG2	GTF2F1
chr2	228393287	228393337	+	intron-Distal	3.26649	5.98045	K562	KHSRP
chr2	228402810	228402872	+	intron-Distal	3.99753	6.63244	HepG2	KHSRP
chr2	228388780	228388898	+	intron-Distal	5.37996	21.47379	HepG2	KHSRP
chr2	228403278	228403341	+	intron-Distal	3.55506	4.97118	HepG2	U2AF2
chr2	228352182	228352281	+	intron-Distal	3.20730	3.28806	K562	KHSRP
chr2	228392177	228392201	+	intron-Distal	4.19368	4.26925	HepG2	KHSRP
chr2	228409073	228409144	+	intron-Distal	3.85572	4.94624	HepG2	MATR3
chr2	228365112	228365194	+	intron-Distal	3.09361	5.77148	HepG2	HNRNPM
chr2	228407135	228407171	+	intron-Distal	4.92879	5.44433	K562	EXOSC5
chr2	228413184	228413285	+	intron-Distal	3.35503	4.08064	K562	KHSRP
chr2	228414626	228414680	+	intron-Distal,intron-Proximal	3.84188	5.85689	HepG2	KHSRP
chr2	228337567	228337650	+	intron-Distal	4.06943	3.96276	HepG2	PCBP2
chr2	228358705	228358819	+	intron-Distal	4.99628	5.85495	HepG2	QKI
chr2	228414120	228414166	+	intron-Distal	5.02306	5.89032	HepG2	QKI
chr2	228414387	228414498	+	intron-Distal	3.47005	9.41906	HepG2	KHSRP
chr2	228407416	228407464	+	intron-Distal	4.64353	3.89080	K562	EXOSC5
chr2	228389797	228389813	+	intron-Distal	3.29632	3.32861	HepG2	U2AF2
chr2	228401182	228401283	+	intron-Distal,intron-Proximal	4.36443	8.75493	K562	KHSRP
chr2	228393388	228393445	+	intron-Distal	3.09988	5.45240	K562	U2AF2
chr2	228409291	228409345	+	intron-Distal	3.27076	4.23155	HepG2	MATR3
chr2	228393291	228393337	+	intron-Distal	3.58693	6.96989	HepG2	U2AF2
chr2	228372157	228372208	+	intron-Distal	4.64994	5.89032	HepG2	QKI
chr2	228397314	228397417	+	intron-Distal	3.57840	5.95946	K562	KHSRP
chr2	228337385	228337483	+	intron-Distal,intron-Proximal	3.12714	3.18246	K562	PRPF8
chr2	228394439	228394488	+	intron-Distal	4.08880	11.25083	HepG2	U2AF2
chr2	228369552	228369628	+	intron-Distal	3.16270	4.01262	HepG2	HNRNPM
chr2	228393364	228393495	+	intron-Distal	4.77191	47.51331	HepG2	U2AF2
chr2	228409644	228409689	+	intron-Distal	4.50702	3.01445	K562	EXOSC5
chr2	228337684	228337746	+	intron-Distal	4.75496	8.27535	HepG2	FAM120A
chr2	228337676	228337768	+	intron-Distal	3.01999	7.66368	HepG2	CSTF2T
chr2	228337572	228337644	+	intron-Distal	5.66422	12.79104	HepG2	GTF2F1
chr2	228408375	228408433	+	intron-Distal	3.38070	3.10641	K562	HNRNPM
chr2	228343639	228343779	+	intron-Distal	4.63660	5.30852	HepG2	HNRNPL
chr2	228389367	228389427	+	intron-Distal,intron-Proximal	3.90637	6.19377	K562	KHSRP
chr2	228407486	228407550	+	intron-Distal	3.57915	4.87260	HepG2	HNRNPM
chr2	228407902	228407920	+	intron-Distal	3.90379	3.01445	K562	EXOSC5
chr2	228388153	228388187	+	intron-Distal	4.06255	4.10688	K562	KHSRP
chr2	228338375	228338472	+	intron-Distal	4.40342	7.75161	HepG2	QKI
chr2	228390127	228390174	+	intron-Distal	3.14479	8.00097	HepG2	HNRNPL
chr2	228400485	228400626	+	intron-Distal	3.42162	5.63547	HepG2	HNRNPL
chr2	228337566	228337674	+	intron-Distal	3.77669	12.08742	HepG2	PRPF4
chr2	228389919	228389952	+	intron-Distal	3.67723	5.30252	HepG2	KHSRP
chr2	228408355	228408425	+	intron-Distal	4.22278	3.72005	K562	MATR3
chr2	228403195	228403330	+	intron-Distal	3.35404	6.59733	K562	KHSRP
chr2	228414531	228414626	+	intron-Distal	4.73747	13.12598	K562	KHSRP
chr2	228407118	228407178	+	intron-Distal	4.33263	3.97018	HepG2	HNRNPM
chr2	228389024	228389058	+	intron-Distal	3.57400	5.30252	HepG2	KHSRP
chr2	228414526	228414604	+	intron-Distal	3.81565	5.29732	HepG2	KHSRP
chr2	228409704	228409727	+	intron-Distal	4.09730	3.01445	K562	EXOSC5
chr2	228414182	228414254	+	intron-Distal	3.99283	12.81375	HepG2	U2AF2
chr2	228408377	228408446	+	intron-Distal	4.24786	6.71533	HepG2	MATR3
chr2	228369618	228369715	+	intron-Distal	4.00124	4.31512	K562	KHSRP
chr2	228406748	228406800	+	intron-Distal	3.68298	3.08928	HepG2	MATR3
chr2	228362199	228362296	+	intron-Distal	3.23535	7.67272	HepG2	QKI
chr2	228390174	228390200	+	intron-Distal	3.20597	8.18489	HepG2	HNRNPL
chr2	228337560	228337636	+	intron-Distal	3.29288	12.84197	HepG2	CSTF2T
chr2	228410045	228410101	+	intron-Distal	3.87223	4.61322	HepG2	MATR3
chr2	228337334	228337401	+	intron-Proximal	3.76816	5.32184	HepG2	PRPF4
chr2	228388652	228388708	+	intron-Proximal	3.52017	4.33754	HepG2	TIAL1
chr2	228388655	228388713	+	intron-Proximal	3.93422	4.05830	HepG2	TIA1
chr2	228337339	228337402	+	intron-Proximal	4.26025	9.34553	HepG2	FAM120A
chr2	228388653	228388697	+	intron-Proximal	4.27077	7.98727	HepG2	KHSRP
chr2	228388662	228388741	+	intron-Proximal	4.42756	4.48843	K562	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for AGFG1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for AGFG1 is not available on ENCORE database.
94 RBPs can affect the levels of AGFG1.

The Knockdown/knockout RNA-Seq assay for AGFG1 is not available on ENCORE database.

94 RBPs can affect the gene expression of AGFG1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AGFG1	ENSG00000173744.13	2614.30550	2064.17450	0.34080	6.29830	5.45730	HepG2	ACO1
AGFG1	ENSG00000173744.13	1773.30630	2260.31300	-0.35010	2.86120	1.84880	HepG2	ADAR
AGFG1	ENSG00000173744.13	2105.28760	2963.22460	-0.49320	4.05980	3.43290	HepG2	AKAP1
AGFG1	ENSG00000173744.13	1571.57120	2411.49960	-0.61770	5.33740	4.02430	HepG2	BCCIP
AGFG1	ENSG00000173744.13	1565.43740	2095.57100	-0.42080	2.70960	1.81870	HepG2	BCLAF1
AGFG1	ENSG00000173744.13	2089.64300	2541.40730	-0.28240	3.06700	2.25800	HepG2	CALR
AGFG1	ENSG00000173744.13	2497.51010	3595.66130	-0.52580	4.17140	2.96140	HepG2	CCAR1
AGFG1	ENSG00000173744.13	1631.73370	2392.39440	-0.55200	3.41880	2.66260	HepG2	CPSF6
AGFG1	ENSG00000173744.13	2706.63660	3305.79910	-0.28850	5.86080	4.83800	HepG2	DAZAP1
AGFG1	ENSG00000173744.13	1634.60090	1909.08360	-0.22390	2.77280	1.93820	HepG2	DDX19B
AGFG1	ENSG00000173744.13	1504.32740	2438.22160	-0.69670	7.34020	6.37610	HepG2	DDX6
AGFG1	ENSG00000173744.13	1666.17510	2195.25360	-0.39780	4.07040	2.89630	HepG2	DHX30
AGFG1	ENSG00000173744.13	1806.69350	2276.09200	-0.33320	4.44850	3.57270	HepG2	DNAJC21
AGFG1	ENSG00000173744.13	1601.47990	2255.84190	-0.49430	12.84760	11.55190	HepG2	DNAJC2
AGFG1	ENSG00000173744.13	2195.95760	1580.13660	0.47470	4.69930	3.54510	HepG2	EIF3D
AGFG1	ENSG00000173744.13	2379.27550	1920.09260	0.30920	3.06850	1.93570	HepG2	EIF3G
AGFG1	ENSG00000173744.13	2091.90970	2590.67460	-0.30850	1.88410	1.35250	HepG2	EIF4A3
AGFG1	ENSG00000173744.13	4396.10480	2522.17280	0.80150	8.26700	7.10970	HepG2	EIF4B
AGFG1	ENSG00000173744.13	2437.63270	3124.16620	-0.35800	3.32660	2.43820	HepG2	EIF4G2
AGFG1	ENSG00000173744.13	1506.68660	1937.69430	-0.36300	3.52830	2.26120	HepG2	FASTKD2
AGFG1	ENSG00000173744.13	3499.42400	2703.43630	0.37220	2.74690	1.98060	HepG2	FIP1L1
AGFG1	ENSG00000173744.13	2076.82930	2712.17730	-0.38510	2.35880	1.76390	HepG2	GPKOW
AGFG1	ENSG00000173744.13	1950.08190	2555.93410	-0.39030	4.03090	3.20520	HepG2	HNRNPC
AGFG1	ENSG00000173744.13	2082.06680	2699.47420	-0.37470	6.54540	5.50640	HepG2	HNRNPF
AGFG1	ENSG00000173744.13	2141.81390	3011.33950	-0.49160	14.75460	13.30930	HepG2	HNRNPL
AGFG1	ENSG00000173744.13	1800.95720	2539.03950	-0.49550	11.11930	9.97280	HepG2	HNRNPU
AGFG1	ENSG00000173744.13	2122.99050	2658.21030	-0.32440	3.64130	2.81990	HepG2	IGF2BP1
AGFG1	ENSG00000173744.13	3102.06300	2464.63990	0.33180	2.61290	1.95510	HepG2	IGF2BP2
AGFG1	ENSG00000173744.13	2135.92240	2593.55340	-0.28010	5.18850	4.21160	HepG2	ILF2
AGFG1	ENSG00000173744.13	1676.35930	2468.86450	-0.55850	3.88210	2.28840	HepG2	ILF3
AGFG1	ENSG00000173744.13	2074.93910	2629.14370	-0.34150	2.25910	1.68510	HepG2	MATR3
AGFG1	ENSG00000173744.13	2504.17580	3278.02190	-0.38850	5.72150	4.63110	HepG2	NOL12
AGFG1	ENSG00000173744.13	2132.31700	2513.27730	-0.23710	2.90980	2.04330	HepG2	PARN
AGFG1	ENSG00000173744.13	2784.77090	2423.10770	0.20060	2.26100	1.70210	HepG2	PCBP1
AGFG1	ENSG00000173744.13	1904.39840	2264.62910	-0.24990	2.68700	1.95900	HepG2	PPIL4
AGFG1	ENSG00000173744.13	3168.59430	2465.55380	0.36180	6.30210	5.54210	HepG2	PTBP1
AGFG1	ENSG00000173744.13	2333.50540	3129.14990	-0.42330	5.15640	4.37420	HepG2	PUF60
AGFG1	ENSG00000173744.13	2686.99260	3321.72040	-0.30590	6.74010	5.89890	HepG2	PUM1
AGFG1	ENSG00000173744.13	2789.13620	2102.50130	0.40760	8.84330	7.84620	HepG2	PUS1
AGFG1	ENSG00000173744.13	2039.55730	2670.36000	-0.38880	5.56220	4.72300	HepG2	QKI
AGFG1	ENSG00000173744.13	6303.89910	2298.75190	1.45530	17.73240	16.09630	HepG2	RAVER1
AGFG1	ENSG00000173744.13	2234.87540	2853.43450	-0.35250	4.32630	3.28300	HepG2	RBM15
AGFG1	ENSG00000173744.13	3709.67620	3114.75900	0.25210	3.19430	2.64780	HepG2	RBM22
AGFG1	ENSG00000173744.13	3351.21540	2423.48390	0.46750	6.41880	5.43180	HepG2	RBM25
AGFG1	ENSG00000173744.13	3266.90730	2743.96530	0.25160	3.31800	2.73670	HepG2	NELFE
AGFG1	ENSG00000173744.13	1975.83760	2542.33280	-0.36370	2.07920	1.38540	HepG2	RPS3A
AGFG1	ENSG00000173744.13	3845.10870	2663.00750	0.52990	3.85130	3.05000	HepG2	SF3A3
AGFG1	ENSG00000173744.13	1668.36800	2561.99000	-0.61880	4.70580	3.80620	HepG2	SF3B1
AGFG1	ENSG00000173744.13	2956.57040	2567.04750	0.20370	2.32600	1.77770	HepG2	SF3B4
AGFG1	ENSG00000173744.13	2944.89280	2636.94060	0.15930	2.09020	1.51940	HepG2	SMN1
AGFG1	ENSG00000173744.13	4110.26500	3518.04100	0.22440	3.78840	3.23010	HepG2	SRFBP1
AGFG1	ENSG00000173744.13	4471.74730	2679.40600	0.73880	29.27650	28.09890	HepG2	SRSF1
AGFG1	ENSG00000173744.13	1880.40020	2652.14820	-0.49610	11.10910	9.87640	HepG2	SRSF7
AGFG1	ENSG00000173744.13	2506.88570	3054.55430	-0.28510	4.52380	3.90030	HepG2	SSB
AGFG1	ENSG00000173744.13	2906.65420	2408.25520	0.27130	3.20580	2.60830	HepG2	TAF15
AGFG1	ENSG00000173744.13	1776.39480	2489.19370	-0.48670	10.63790	9.63950	HepG2	TRIM56
AGFG1	ENSG00000173744.13	2825.54590	2312.63940	0.28890	2.13880	1.57960	HepG2	U2AF1
AGFG1	ENSG00000173744.13	2475.07800	3235.80690	-0.38670	3.07000	2.19040	HepG2	UBE2L3
AGFG1	ENSG00000173744.13	1532.77670	2161.71770	-0.49600	2.74770	1.74680	HepG2	UPF2
AGFG1	ENSG00000173744.13	3073.65160	2280.10990	0.43080	9.85640	8.83750	HepG2	UTP3
AGFG1	ENSG00000173744.13	1721.84520	2277.13000	-0.40330	2.37510	1.36840	HepG2	XPO5
AGFG1	ENSG00000173744.13	1510.51120	2323.50110	-0.62130	6.41910	5.32950	HepG2	XRN2
AGFG1	ENSG00000173744.13	3096.01190	2597.39660	0.25320	4.73450	4.06780	HepG2	ZNF622
AGFG1	ENSG00000173744.13	2405.82450	1688.51360	0.51070	11.28950	10.23690	K562	AGGF1
AGFG1	ENSG00000173744.13	2506.50390	1855.45580	0.43380	4.18530	2.92170	K562	AKAP8
AGFG1	ENSG00000173744.13	2201.90920	1756.98350	0.32560	2.96440	2.28800	K562	AKAP8L
AGFG1	ENSG00000173744.13	1601.76050	2184.00520	-0.44730	4.69670	3.96900	K562	AQR
AGFG1	ENSG00000173744.13	1916.09980	1309.87480	0.54860	5.77640	4.50170	K562	BOP1
AGFG1	ENSG00000173744.13	1621.46730	2112.50290	-0.38170	5.86470	4.20820	K562	CPEB4
AGFG1	ENSG00000173744.13	4495.56820	3297.59790	0.44700	7.55910	5.97510	K562	CELF1
AGFG1	ENSG00000173744.13	3764.44790	2186.15210	0.78390	27.55740	25.70870	K562	DDX47
AGFG1	ENSG00000173744.13	1490.66400	1736.39420	-0.22010	1.99420	1.36620	K562	EIF2S2
AGFG1	ENSG00000173744.13	1127.88150	732.47980	0.62270	3.43360	2.30380	K562	EIF3A
AGFG1	ENSG00000173744.13	1531.35660	1089.68440	0.49080	6.73340	5.50380	K562	EIF3G
AGFG1	ENSG00000173744.13	3077.65830	2682.08090	0.19840	2.39370	1.51620	K562	EIF4G2
AGFG1	ENSG00000173744.13	1235.25610	963.35540	0.35860	3.44290	1.92600	K562	FUS
AGFG1	ENSG00000173744.13	1685.39420	1407.28760	0.26010	2.48940	1.41230	K562	GLRX3
AGFG1	ENSG00000173744.13	1633.00040	1329.66670	0.29640	2.26470	1.54570	K562	GPKOW
AGFG1	ENSG00000173744.13	1662.48460	2314.03670	-0.47710	5.97440	4.86080	K562	GRSF1
AGFG1	ENSG00000173744.13	1778.31880	1465.77590	0.27870	2.41260	1.41290	K562	HNRNPA1
AGFG1	ENSG00000173744.13	2525.33360	1864.56880	0.43750	2.88580	2.04080	K562	KIF1C
AGFG1	ENSG00000173744.13	1494.80440	1135.47540	0.39660	2.13920	1.33020	K562	KRR1
AGFG1	ENSG00000173744.13	2172.08510	1784.87530	0.28320	2.36340	1.39560	K562	MAK16
AGFG1	ENSG00000173744.13	2047.78530	1464.09470	0.48400	2.04650	1.31100	K562	NAA15
AGFG1	ENSG00000173744.13	1915.77100	1643.96210	0.22060	3.04460	2.26530	K562	NSUN2
AGFG1	ENSG00000173744.13	849.98440	1145.53400	-0.43050	3.54530	1.85820	K562	NUSAP1
AGFG1	ENSG00000173744.13	2449.82150	1619.45120	0.59710	3.74720	2.28620	K562	PABPC1
AGFG1	ENSG00000173744.13	1730.10760	1102.38590	0.65010	2.28800	1.40480	K562	PABPN1
AGFG1	ENSG00000173744.13	792.58650	1043.06010	-0.39620	2.94890	2.01010	K562	PSIP1
AGFG1	ENSG00000173744.13	3151.25030	1742.38480	0.85480	15.04280	13.81820	K562	PUS1
AGFG1	ENSG00000173744.13	2220.69530	1697.74180	0.38730	5.39690	4.59400	K562	RBM15
AGFG1	ENSG00000173744.13	1698.93030	1160.01520	0.55040	4.59220	3.53680	K562	RPS19
AGFG1	ENSG00000173744.13	2445.15030	1503.97600	0.70100	5.07770	2.84850	K562	RPS3A
AGFG1	ENSG00000173744.13	1617.71460	1164.38630	0.47430	2.98670	1.60090	K562	RRP9
AGFG1	ENSG00000173744.13	2241.93640	1622.14030	0.46670	8.09880	6.76270	K562	SF3A3
AGFG1	ENSG00000173744.13	2503.44150	1384.74670	0.85420	3.95150	2.11940	K562	SUPT6H
AGFG1	ENSG00000173744.13	1071.48710	1447.08440	-0.43350	3.88780	1.97300	K562	TBRG4
AGFG1	ENSG00000173744.13	1954.47130	1389.81230	0.49180	6.92230	5.66030	K562	U2AF2
AGFG1	ENSG00000173744.13	2072.94410	1491.54080	0.47480	6.03280	4.71250	K562	WDR3
AGFG1	ENSG00000173744.13	2372.90350	1551.01100	0.61330	17.48280	15.61940	K562	WDR43
AGFG1	ENSG00000173744.13	2995.03330	2460.27650	0.28370	2.44220	1.64010	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for AGFG1 is not available on ENCORE database.

8 RBPs can affect the splicing of AGFG1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	AGFG1	ENSG00000173744.13	chr2	+	228401616	228401709	228401340	228401420	228416674	228416833	-0.28000	0.00000	0.00000	excluded	K562	SF3B4
SE	AGFG1	ENSG00000173744.13	chr2	+	228401616	228401709	228401340	228401420	228416674	228416833	-0.15700	0.00000	0.00000	excluded	HepG2	U2AF1
SE	AGFG1	ENSG00000173744.13	chr2	+	228384663	228384779	228356262	228356356	228388478	228388641	0.05100	0.00049	0.00778	included	HepG2	U2AF2
SE	AGFG1	ENSG00000173744.13	chr2	+	228401616	228401709	228401340	228401420	228416674	228416833	-0.06700	0.00459	0.04954	excluded	HepG2	U2AF2
SE	AGFG1	ENSG00000173744.13	chr2	+	228384663	228384779	228356262	228356356	228388478	228388641	0.05100	0.00191	0.07311	included	HepG2	SFPQ
SE	AGFG1	ENSG00000173744.13	chr2	+	228395037	228395146	228389477	228389631	228395806	228395926	0.08200	0.00018	0.01365	included	K562	EFTUD2
SE	AGFG1	ENSG00000173744.13	chr2	+	228401616	228401709	228401340	228401420	228416674	228416833	-0.27200	0.00004	0.00136	excluded	K562	U2AF1
SE	AGFG1	ENSG00000173744.13	chr2	+	228401616	228401709	228401340	228401420	228416674	228416833	-0.13700	0.00000	0.00000	excluded	HepG2	SF3A3
SE	AGFG1	ENSG00000173744.13	chr2	+	228401616	228401709	228401340	228401420	228416674	228416833	-0.07200	0.00032	0.01865	excluded	HepG2	SF3B4
SE	AGFG1	ENSG00000173744.13	chr2	+	228414774	228414822	228401670	228401709	228416674	228416833	0.09500	0.00259	0.04297	included	K562	U2AF2
SE	AGFG1	ENSG00000173744.13	chr2	+	228401616	228401709	228401340	228401420	228416674	228416833	-0.25800	0.00000	0.00005	excluded	K562	U2AF2
SE	AGFG1	ENSG00000173744.13	chr2	+	228396853	228396925	228395806	228395926	228398264	228398474	0.15100	0.00000	0.00000	included	K562	PTBP1
A3SS	AGFG1	ENSG00000173744.13	chr2	+	228416657	228416833	228416674	228416833	228401594	228401709	0.05100	0.00104	0.00720	longer	K562	AQR
A3SS	AGFG1	ENSG00000173744.13	chr2	+	228401306	228401420	228401340	228401420	228399623	228399741	0.10100	0.00001	0.00006	longer	K562	AQR
A3SS	AGFG1	ENSG00000173744.13	chr2	+	228389459	228389631	228389477	228389631	228388478	228388641	0.07400	0.00007	0.00063	longer	K562	AQR
A3SS	AGFG1	ENSG00000173744.13	chr2	+	228388454	228388641	228388478	228388641	228384663	228384779	0.12300	0.00000	0.00000	longer	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AGFG1

General Information

Functions

Localization

Domains (AlphaFold: AGFG1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AGFG1 is not avaliable on ENCORE database.

36 proteins are bound to AGFG1 RNA:

eCLIP assay for AGFG1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AGFG1 is not available on ENCORE database.

94 RBPs can affect the gene expression of AGFG1 :

The Knockdown/knockout RNA-Seq assay for AGFG1 is not available on ENCORE database.

8 RBPs can affect the splicing of AGFG1 :

The Knockdown/knockout RNA-Seq assay for AGFG1 is not avaliable on ENCORE database.