ZNRF1

General Information

Gene Name       : ZNRF1
Gene ID             : ENSG00000186187.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNRF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNRF1ENSG00000186187.114.949.807.37ENCSR000AEF
HepG2ZNRF1ENSG00000186187.1122.7126.5824.64ENCSR985KAT
K562ZNRF1ENSG00000186187.1115.2013.5014.35ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNRF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNRF1 RNA is bound by 35 proteins.  







eCLIP assay for ZNRF1 is not avaliable on ENCORE database.





35 proteins are bound to ZNRF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr167514251075142571+3'-UTR5.3443022.68047K562PABPC4
chr167513867975138791+3'-UTR,CDS,intron-Proximal3.194006.06509HepG2PPIG
chr167514473275144772+3'-UTR4.053083.44758HepG2CSTF2T
chr167513889175138941+3'-UTR,intron-Distal5.271675.99517HepG2EFTUD2
chr167514156975141671+3'-UTR,CDS,intron-Distal,intron-Proximal3.785723.67894HepG2AQR
chr167514381175143880+3'-UTR3.179187.01804HepG2CSTF2T
chr167514422875144283+3'-UTR3.032484.61784HepG2CSTF2T
chr167514264775142699+3'-UTR3.685218.52590HepG2CSTF2T
chr167514274975142808+3'-UTR3.613737.33122HepG2CSTF2T
chr167514197475142002+3'-UTR3.815803.83987K562PABPC4
chr167514172175141776+3'-UTR,CDS,intron-Proximal4.179753.16434HepG2LARP4
chr167514478175144849+3'-UTR3.540316.83379HepG2CSTF2T
chr167514219575142301+3'-UTR3.346576.15884HepG2PCBP2
chr167514199175142101+3'-UTR4.023583.63953HepG2IGF2BP3
chr167514460975144687+3'-UTR,polyA_site3.777287.56410HepG2CSTF2T
chr167514265075142708+3'-UTR5.0804710.41006HepG2CSTF2
chr167514261375142650+3'-UTR3.683726.32023HepG2CSTF2
chr167514185775141904+3'-UTR3.784253.04397HepG2TIA1
chr167514040475140498+3'-UTR,CDS,intron-Distal,intron-Proximal3.376003.67894HepG2AQR
chr167514303675143081+3'-UTR3.607894.45183HepG2CSTF2T
chr167514460075144683+3'-UTR,polyA_site5.2509712.16608HepG2CSTF2
chr167513878575138829+3'-UTR,CDS,intron-Proximal4.493244.62947HepG2AQR
chr167514193075142021+3'-UTR,polyA_site3.681104.98044HepG2CSTF2
chr167514191175141966+3'-UTR,polyA_site5.4876115.66634K562PABPC4
chr167514162875141699+3'-UTR,CDS,intron-Distal,intron-Proximal4.243073.92497HepG2UPF1
chr167514274775142819+3'-UTR3.320234.60931HepG2CSTF2
chr167503295675033064+5'-UTR3.510276.53857HepG2FTO
chr167503348875033527+5'-UTR4.6618514.33408HepG2U2AF1
chr167503344475033467+5'-UTR3.090413.96597K562TIA1
chr167503352675033585+5'-UTR,CDS3.0809114.33123HepG2DDX3X
chr167503310475033193+5'-UTR3.6725624.94082HepG2DDX3X
chr167503331375033378+5'-UTR4.013635.63105K562DDX3X
chr167503326475033319+5'-UTR3.8127919.88243HepG2DDX3X
chr167503294775033023+5'-UTR5.2929648.64512HepG2DDX3X
chr167503346775033483+5'-UTR3.252596.43896K562TIA1
chr167503303575033104+5'-UTR4.5029138.15401HepG2DDX3X
chr167503345975033488+5'-UTR4.8213814.83084HepG2U2AF1
chr167503348375033520+5'-UTR3.078147.98856K562TIA1
chr167503319875033258+5'-UTR3.495315.01765K562GEMIN5
chr167512755175127636+CDS,intron-Proximal3.6841410.17713HepG2PRPF8
chr167514031275140396+CDS,intron-Distal,intron-Proximal3.659953.39008HepG2AQR
chr167514034375140400+CDS,intron-Distal,intron-Proximal3.883746.74156HepG2SF3B4
chr167504895475049045+intron-Distal5.4063710.95353K562KHSRP
chr167508386175083936+intron-Distal3.900993.57018HepG2HNRNPK
chr167514142575141486+intron-Distal3.548855.16304HepG2CSTF2T
chr167506170775061759+intron-Distal6.7638421.16199HepG2QKI
chr167507128575071313+intron-Distal3.364216.92132HepG2HNRNPC
chr167508483475084926+intron-Distal3.310343.80809HepG2ILF3
chr167504860175048691+intron-Distal4.956016.68793HepG2KHSRP
chr167507061575070683+intron-Distal4.665694.17759HepG2QKI
chr167504295075042999+intron-Distal3.357065.83578HepG2SUGP2
chr167504219375042241+intron-Distal3.198295.35016HepG2SUGP2
chr167514032275140343+intron-Distal,intron-Proximal3.414713.33980HepG2SF3B4
chr167506176075061861+intron-Distal5.030804.31720HepG2MATR3
chr167504882775048889+intron-Distal4.8841510.93437K562KHSRP
chr167506191675061963+intron-Distal4.232123.42734K562PTBP1
chr167504917875049209+intron-Distal4.193684.26925HepG2KHSRP
chr167506177475061863+intron-Distal4.610178.88160HepG2PTBP1
chr167506169275061774+intron-Distal4.256106.30952K562QKI
chr167503413875034226+intron-Distal3.493188.43954HepG2SFPQ
chr167504249775042575+intron-Distal3.293837.80569HepG2SUGP2
chr167504872375048755+intron-Distal3.860353.02234K562KHSRP
chr167504229175042387+intron-Distal4.306206.29761HepG2MATR3
chr167508146275081535+intron-Distal4.161198.02251HepG2HNRNPM
chr167504857675048632+intron-Distal3.177523.73766HepG2SFPQ
chr167503455875034602+intron-Distal4.2895820.51152HepG2HNRNPM
chr167505379975053846+intron-Distal3.783313.38413HepG2HNRNPC
chr167503443575034521+intron-Distal4.457133.53404K562HNRNPM
chr167508821875088274+intron-Distal3.489463.68462HepG2MATR3
chr167505589275055983+intron-Distal3.568333.30744K562PTBP1
chr167512083875120914+intron-Distal4.560075.36332HepG2CSTF2T
chr167506254375062607+intron-Distal3.418243.33633HepG2MATR3
chr167503967275039735+intron-Distal3.716973.06347K562NONO
chr167503821375038284+intron-Distal3.358863.39857HepG2HNRNPM
chr167509232075092370+intron-Distal3.717543.69388HepG2XPO5
chr167506207575062157+intron-Distal5.309567.15244K562QKI
chr167504949375049606+intron-Distal3.7564411.97098HepG2ILF3
chr167505228275052368+intron-Distal3.277344.06762HepG2U2AF2
chr167503666875036769+intron-Distal4.786064.97123HepG2PCBP2
chr167504086075040941+intron-Distal4.302075.18738K562TARDBP
chr167503452475034553+intron-Distal3.9556212.55954HepG2HNRNPM
chr167505880375058887+intron-Distal3.886173.46495K562TARDBP
chr167511881875118887+intron-Distal3.673493.47315HepG2CSTF2
chr167503813175038183+intron-Distal4.003413.31905K562NONO
chr167504912975049154+intron-Distal3.202435.57010K562KHSRP
chr167506960475069695+intron-Distal3.363637.44808HepG2RBFOX2
chr167513425475134350+intron-Distal3.365804.09699HepG2HNRNPK
chr167512997875130044+intron-Distal4.175193.91772K562TARDBP
chr167504372275043760+intron-Distal3.846023.16028HepG2SUGP2
chr167504866975048723+intron-Distal4.192819.40001K562KHSRP
chr167507669575076753+intron-Distal3.958653.27946HepG2HNRNPM
chr167504883675048909+intron-Distal5.001086.14841HepG2KHSRP
chr167503448875034544+intron-Distal4.044643.57432K562NONO
chr167508542375085465+intron-Distal4.165644.18168HepG2ILF3
chr167507125675071285+intron-Distal3.896487.51898HepG2HNRNPC
chr167514108775141186+intron-Distal5.7378815.46295HepG2HNRNPK
chr167503452175034607+intron-Distal5.325619.21000K562HNRNPM
chr167508940275089447+intron-Distal3.529085.30446HepG2SUGP2
chr167508809075088168+intron-Distal4.156615.62053HepG2HNRNPM
chr167503408175034117+intron-Distal,intron-Proximal4.205614.33692K562NONO
chr167504293375042994+intron-Distal3.323343.93186HepG2MATR3
chr167504904575049102+intron-Distal3.460017.71234K562KHSRP
chr167504892875049017+intron-Distal3.514204.89227HepG2KHSRP
chr167504276675042898+intron-Distal3.2015913.78463HepG2SUGP2
chr167503650075036550+intron-Distal3.530843.66782HepG2HNRNPM
chr167503443175034517+intron-Distal4.1899313.58602HepG2HNRNPM
chr167505809875058150+intron-Distal3.653603.94088HepG2QKI
chr167504276775042850+intron-Distal3.098017.62372HepG2MATR3
chr167511449375114560+intron-Distal4.078544.62831HepG2PCBP2
chr167509033275090462+intron-Distal3.540194.17049K562TARDBP
chr167512083375120910+intron-Distal3.751084.51074HepG2RBFOX2
chr167508822575088318+intron-Distal4.8167912.96174HepG2HNRNPM
chr167508819275088225+intron-Distal3.604974.28420HepG2HNRNPM
chr167506278175062859+intron-Distal4.764595.41368HepG2PTBP1
chr167505841875058472+intron-Distal4.233663.34098HepG2HNRNPM
chr167503414975034243+intron-Distal3.594418.33198K562NONO
chr167504864175048710+intron-Distal4.503029.30914HepG2SFPQ
chr167503852675038587+intron-Distal3.980156.24326HepG2HNRNPC
chr167503434275034382+intron-Distal,intron-Proximal5.077696.45442HepG2HNRNPM
chr167506569675065724+intron-Distal5.3966422.75325HepG2XPO5
chr167508162175081680+intron-Distal3.914773.16028HepG2SUGP2
chr167506162975061703+intron-Distal3.605963.54232HepG2HNRNPL
chr167505133575051431+intron-Distal3.756273.14791K562HNRNPL
chr167503460275034644+intron-Distal5.3146818.97432HepG2HNRNPM
chr167513670975136771+intron-Distal4.880675.87141HepG2HNRNPK
chr167506207075062174+intron-Distal6.0829324.85548HepG2QKI
chr167507895875079019+intron-Distal4.279888.71921HepG2HNRNPM
chr167508838475088473+intron-Distal5.148218.95589HepG2MATR3
chr167504948475049561+intron-Distal4.433025.08856K562ILF3
chr167509354775093617+intron-Distal3.283253.59523HepG2SUGP2
chr167505589275055998+intron-Distal3.309734.26712HepG2PTBP1
chr167507650175076541+intron-Distal4.052383.34098HepG2HNRNPM
chr167514099475141087+intron-Distal3.702605.84225HepG2HNRNPK
chr167504856075048616+intron-Distal4.221093.87294K562TARDBP
chr167505414375054223+intron-Distal3.038423.19404HepG2PTBP1
chr167503720775037286+intron-Distal3.325854.50064HepG2SFPQ
chr167510376675103854+intron-Distal3.573324.84827HepG2HNRNPK
chr167513689075136965+intron-Distal3.261285.84478HepG2DDX59
chr167506572475065784+intron-Distal6.8966446.91351HepG2XPO5
chr167505133175051443+intron-Distal3.005174.09021HepG2HNRNPL
chr167505422775054334+intron-Distal3.710576.62503K562KHSRP
chr167508542275085474+intron-Distal4.791736.76020HepG2HNRNPC
chr167503416475034198+intron-Distal3.178146.64562HepG2HNRNPM
chr167508822575088296+intron-Distal4.382824.52011K562HNRNPM
chr167504888975048954+intron-Distal5.500699.15655K562KHSRP
chr167503739875037501+intron-Distal4.237473.55086HepG2RBM5
chr167503400175034071+intron-Proximal3.762825.85006K562NONO
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNRF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNRF1 is not available on ENCORE database.

  • 79 RBPs can affect the levels of ZNRF1.  








The Knockdown/knockout RNA-Seq assay for ZNRF1 is not available on ENCORE database.





79 RBPs can affect the gene expression of ZNRF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNRF1ENSG00000186187.71842.242201286.533500.517904.672603.47640HepG2ABCF1
ZNRF1ENSG00000186187.7840.85570982.69650-0.224901.938401.41270HepG2ACO1
ZNRF1ENSG00000186187.7959.61180577.865500.731608.002806.41680HepG2ADAR
ZNRF1ENSG00000186187.7563.103101294.06310-1.200409.087008.18550HepG2AKAP1
ZNRF1ENSG00000186187.7889.224001317.66700-0.567403.781702.56910HepG2AKAP8
ZNRF1ENSG00000186187.71277.061201480.15970-0.212901.972601.37600HepG2AUH
ZNRF1ENSG00000186187.7608.70930800.40480-0.395003.009602.20690HepG2CALR
ZNRF1ENSG00000186187.7771.188001196.10970-0.633203.840102.93260HepG2CNOT7
ZNRF1ENSG00000186187.7737.55050592.606400.315602.410101.46280HepG2YBX3
ZNRF1ENSG00000186187.7714.442701239.43740-0.794806.104405.21000HepG2DDX3X
ZNRF1ENSG00000186187.7550.51820706.82770-0.360602.137801.45010HepG2DDX55
ZNRF1ENSG00000186187.7794.41730576.772700.461806.049905.13990HepG2DNAJC2
ZNRF1ENSG00000186187.7470.41440677.81810-0.527003.164101.97200HepG2AGO1
ZNRF1ENSG00000186187.7708.884401023.51120-0.529903.457902.79900HepG2EIF2S1
ZNRF1ENSG00000186187.71445.849201114.524800.375403.056901.91200HepG2ESF1
ZNRF1ENSG00000186187.72018.854801699.448200.248402.892702.28040HepG2ETF1
ZNRF1ENSG00000186187.71222.92550960.141800.348902.959802.09890HepG2EWSR1
ZNRF1ENSG00000186187.7472.99090701.47800-0.568605.119103.63680HepG2FASTKD2
ZNRF1ENSG00000186187.7670.14630824.43920-0.298902.019301.33910HepG2FUBP3
ZNRF1ENSG00000186187.71578.838901124.380000.489604.187003.08150HepG2G3BP2
ZNRF1ENSG00000186187.7693.38210500.851800.469203.144302.18380HepG2GEMIN5
ZNRF1ENSG00000186187.7490.18280643.49550-0.392602.395401.45190HepG2GNB2L1
ZNRF1ENSG00000186187.71131.79120587.435600.9460014.5810013.28790HepG2HNRNPA1
ZNRF1ENSG00000186187.7907.88480653.430100.474403.879903.06930HepG2HNRNPC
ZNRF1ENSG00000186187.71287.35350928.337200.471607.064505.98750HepG2HNRNPF
ZNRF1ENSG00000186187.71095.05530805.303300.443303.254402.57840HepG2HNRNPLL
ZNRF1ENSG00000186187.7695.26060896.38350-0.366602.740101.79380HepG2HNRNPM
ZNRF1ENSG00000186187.7789.76990649.108800.282901.999201.47390HepG2HNRNPU
ZNRF1ENSG00000186187.71295.17440914.147600.502506.098605.06430HepG2IGF2BP1
ZNRF1ENSG00000186187.71367.660801076.048900.345902.301601.67940HepG2IGF2BP2
ZNRF1ENSG00000186187.71470.336501015.819400.533403.874002.88870HepG2LARP4
ZNRF1ENSG00000186187.71471.402501142.038000.365501.841801.30140HepG2MAGOH
ZNRF1ENSG00000186187.7880.313801148.33120-0.383401.978801.44060HepG2MATR3
ZNRF1ENSG00000186187.7818.096201051.49960-0.362102.787501.97690HepG2MSI2
ZNRF1ENSG00000186187.7846.956101024.54070-0.274602.079401.41590HepG2NOL12
ZNRF1ENSG00000186187.7777.185501093.45690-0.492602.271401.48200HepG2PABPC1
ZNRF1ENSG00000186187.7632.98530465.211100.444203.511002.12410HepG2PKM
ZNRF1ENSG00000186187.71482.861901037.469900.515205.223404.31600HepG2PUM2
ZNRF1ENSG00000186187.71511.382701000.919000.5944012.7756011.61650HepG2PUS1
ZNRF1ENSG00000186187.7934.972401175.50140-0.330302.957902.07360HepG2RBM15
ZNRF1ENSG00000186187.71428.781501042.159500.455104.764103.90070HepG2RBM25
ZNRF1ENSG00000186187.7959.03690617.528200.635003.642802.42490HepG2RCC2
ZNRF1ENSG00000186187.71452.434701179.968700.299603.098202.53190HepG2NELFE
ZNRF1ENSG00000186187.71448.858901098.928400.398705.326804.50610HepG2RECQL
ZNRF1ENSG00000186187.71229.75590699.067400.814806.354404.96330HepG2RPS10
ZNRF1ENSG00000186187.7724.13460547.418200.403502.846802.22450HepG2RPS19
ZNRF1ENSG00000186187.71959.710001233.015200.668305.802604.80290HepG2SF3A3
ZNRF1ENSG00000186187.71150.80470797.114200.529705.122504.18430HepG2SF3B1
ZNRF1ENSG00000186187.71469.606901103.903600.412705.641204.84740HepG2SF3B4
ZNRF1ENSG00000186187.71174.90040937.815100.325104.191803.35380HepG2SLBP
ZNRF1ENSG00000186187.7527.70000886.92110-0.749103.272202.41980HepG2SNRNP70
ZNRF1ENSG00000186187.71431.238701152.211100.312803.642103.11830HepG2SRSF1
ZNRF1ENSG00000186187.71185.64180965.683400.295903.181802.51820HepG2SRSF5
ZNRF1ENSG00000186187.71542.75410912.059000.7582018.1633016.66120HepG2SRSF7
ZNRF1ENSG00000186187.7720.84880937.36330-0.378904.451103.78190HepG2SRSF9
ZNRF1ENSG00000186187.71699.150801392.895600.286603.671103.09850HepG2SSB
ZNRF1ENSG00000186187.71027.53750703.570800.546303.407302.66660HepG2SUPV3L1
ZNRF1ENSG00000186187.71133.80980784.815300.530705.045904.11020HepG2TARDBP
ZNRF1ENSG00000186187.71011.04440630.668200.680809.554408.72270HepG2TIAL1
ZNRF1ENSG00000186187.7449.35230636.37280-0.502005.473904.73220HepG2TRIM56
ZNRF1ENSG00000186187.71307.64330955.523000.452504.853503.66300HepG2TUFM
ZNRF1ENSG00000186187.71080.22820644.083600.745904.834803.48860HepG2UPF2
ZNRF1ENSG00000186187.71046.90780692.590300.596004.429903.51940HepG2XRN2
ZNRF1ENSG00000186187.71134.57030710.996600.674105.244303.39340HepG2ZRANB2
ZNRF1ENSG00000186187.7899.04450558.532900.686703.817102.53440K562CNOT7
ZNRF1ENSG00000186187.7469.55590356.875900.395802.372501.41030K562DDX3X
ZNRF1ENSG00000186187.71186.93550684.135100.7948016.6134015.13660K562DDX47
ZNRF1ENSG00000186187.7512.63900355.751200.527003.209502.22080K562EFTUD2
ZNRF1ENSG00000186187.71028.92220596.276200.7870014.0092012.57890K562EIF2S2
ZNRF1ENSG00000186187.7503.49490321.625900.646502.950501.90970K562EIF3A
ZNRF1ENSG00000186187.7756.61250380.819800.990309.698807.60830K562EIF3D
ZNRF1ENSG00000186187.7404.83000235.364700.782307.149405.88310K562EIF3G
ZNRF1ENSG00000186187.71349.49240824.451100.7108012.4646010.54470K562EIF4G2
ZNRF1ENSG00000186187.7804.02570528.409800.605505.658404.42010K562FIP1L1
ZNRF1ENSG00000186187.7780.64620541.553400.527505.152503.70290K562HNRNPA1
ZNRF1ENSG00000186187.7788.07580599.752100.393903.458002.46170K562HNRNPU
ZNRF1ENSG00000186187.7977.35490756.662300.369102.779901.86820K562MBNL1
ZNRF1ENSG00000186187.7735.21030602.432900.287302.497701.78490K562NSUN2
ZNRF1ENSG00000186187.7830.46240536.587700.630003.723802.26830K562PABPC1
ZNRF1ENSG00000186187.7981.33980753.485300.381103.080401.38390K562RBM17
ZNRF1ENSG00000186187.7606.22310352.573000.781805.818304.62780K562RPS19
ZNRF1ENSG00000186187.7473.26370269.868100.810305.653004.15730K562RPS3
ZNRF1ENSG00000186187.7772.14650594.425200.377302.947102.10780K562SF3A3
ZNRF1ENSG00000186187.7358.27290235.503800.605204.354503.27440K562SF3B4
ZNRF1ENSG00000186187.7446.45540340.564900.390502.197401.55890K562SRSF1
ZNRF1ENSG00000186187.7363.02270260.538600.478502.423501.44780K562SRSF4
ZNRF1ENSG00000186187.7697.06030526.099800.405802.587201.45840K562SRSF7
ZNRF1ENSG00000186187.7589.57940344.665400.774407.237706.03490K562TARDBP
ZNRF1ENSG00000186187.7507.04000334.825800.598603.907202.78250K562TIAL1
ZNRF1ENSG00000186187.7843.04560638.771200.400204.048403.19500K562UPF1
ZNRF1ENSG00000186187.7877.99640568.364700.6273010.098208.59620K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNRF1 is not available on ENCORE database.





1 RBPs can affect the splicing of ZNRF1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNRF1ENSG00000186187.7chr16+751274697512756575033242750339937513868175138787-0.064000.002170.03216excludedK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNRF1 is not avaliable on ENCORE database.