XIST

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	XIST	ENSG00000229807.11	270.58	219.10	244.84	ENCSR000AEF
HepG2	XIST	ENSG00000229807.11	0.03	0.02	0.03	ENCSR985KAT
K562	XIST	ENSG00000229807.11	74.80	85.57	80.19	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for XIST is not avaliable on ENCORE database.

Proteins bound to RNA

XIST RNA is bound by 33 proteins.

eCLIP assay for XIST is not avaliable on ENCORE database.

33 proteins are bound to XIST RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	73072246	73072267	-	intron-Distal	4.90841	400.00000	K562	RBM15
chrX	73071259	73071266	-	intron-Distal	3.20802	49.30726	K562	UCHL5
chrX	73072494	73072534	-	intron-Distal	3.77451	40.46647	K562	UCHL5
chrX	73071754	73071768	-	intron-Distal	4.39766	40.93945	K562	SRSF1
chrX	73062699	73062763	-	intron-Distal	3.54893	15.90337	K562	HNRNPK
chrX	73071894	73071924	-	intron-Distal	3.07751	5.07154	K562	HNRNPC
chrX	73047297	73047399	-	intron-Distal	4.19186	400.00000	K562	MATR3
chrX	73071711	73071762	-	intron-Distal	3.24668	29.73102	K562	EXOSC5
chrX	73070907	73070950	-	intron-Distal	3.04530	5.40003	K562	RBM22
chrX	73047547	73047626	-	intron-Distal,intron-Proximal	4.21954	21.25775	K562	TIA1
chrX	73062545	73062595	-	intron-Distal	4.25282	28.97228	K562	HNRNPK
chrX	73064769	73064791	-	intron-Distal	3.28347	9.13154	K562	HNRNPK
chrX	73071897	73071936	-	intron-Distal	5.09007	26.83203	K562	SRSF1
chrX	73064710	73064766	-	intron-Distal	4.91572	37.50963	K562	HNRNPK
chrX	73046712	73046777	-	intron-Distal,intron-Proximal	3.53797	6.84845	K562	SRSF1
chrX	73070639	73070677	-	intron-Distal	4.49966	28.37548	K562	EXOSC5
chrX	73070881	73070958	-	intron-Distal	3.50071	400.00000	K562	UCHL5
chrX	73071807	73071848	-	intron-Distal	5.50897	400.00000	K562	RBM15
chrX	73071863	73071884	-	intron-Distal	3.94002	45.71249	K562	RBM15
chrX	73071459	73071511	-	intron-Distal	3.61319	32.52324	K562	EXOSC5
chrX	73070689	73070704	-	intron-Distal	3.75287	33.02917	K562	EXOSC5
chrX	73072377	73072391	-	intron-Distal	4.16220	72.71618	K562	UCHL5
chrX	73062505	73062545	-	intron-Distal	4.09896	41.47953	K562	HNRNPK
chrX	73070364	73070383	-	intron-Distal	5.36461	27.43407	K562	HNRNPM
chrX	73071095	73071152	-	intron-Distal	6.46001	400.00000	K562	HNRNPM
chrX	73071618	73071629	-	intron-Distal	3.88225	75.57364	K562	UCHL5
chrX	73061018	73061100	-	intron-Distal	3.13850	3.13218	K562	PRPF8
chrX	73069592	73069612	-	intron-Distal	4.38326	21.75181	K562	HNRNPK
chrX	73072166	73072179	-	intron-Distal	3.72000	44.25970	K562	UCHL5
chrX	73071643	73071674	-	intron-Distal	3.17654	16.78768	K562	HNRNPM
chrX	73072019	73072094	-	intron-Distal	3.27286	9.77636	K562	SDAD1
chrX	73072056	73072063	-	intron-Distal	3.79539	400.00000	K562	RBM15
chrX	73070723	73070738	-	intron-Distal	3.75161	15.76705	K562	EXOSC5
chrX	73047352	73047385	-	intron-Distal	5.44812	400.00000	K562	PTBP1
chrX	73072431	73072462	-	intron-Distal	3.46499	55.47929	K562	UCHL5
chrX	73047694	73047729	-	intron-Distal	3.39384	14.09947	K562	MATR3
chrX	73040803	73040936	-	intron-Distal	3.21204	8.15340	K562	LARP4
chrX	73071606	73071627	-	intron-Distal	4.10615	57.97638	K562	RBM15
chrX	73050067	73050167	-	intron-Distal	5.16766	5.61339	K562	QKI
chrX	73047577	73047631	-	intron-Distal,intron-Proximal	5.17470	38.07848	K562	MATR3
chrX	73072138	73072185	-	intron-Distal	4.17192	27.47001	K562	SRSF1
chrX	73072431	73072473	-	intron-Distal	5.16200	71.02374	K562	RBM15
chrX	73069614	73069697	-	intron-Distal	6.17087	66.13572	K562	HNRNPK
chrX	73065536	73065573	-	intron-Distal	3.55089	14.02764	K562	HNRNPK
chrX	73070958	73070986	-	intron-Distal	3.69590	56.45648	K562	UCHL5
chrX	73072095	73072138	-	intron-Distal	3.25699	4.17383	K562	HNRNPC
chrX	73068255	73068300	-	intron-Distal	4.25405	21.84591	K562	HNRNPK
chrX	73070186	73070236	-	intron-Distal	3.98461	21.52324	K562	KHSRP
chrX	73071655	73071701	-	intron-Distal	4.47839	81.80030	K562	UCHL5
chrX	73072358	73072383	-	intron-Distal	4.81195	43.32309	K562	RBM15
chrX	73072267	73072297	-	intron-Distal	4.77320	400.00000	K562	RBM15
chrX	73071606	73071618	-	intron-Distal	3.96915	400.00000	K562	UCHL5
chrX	73071749	73071757	-	intron-Distal	5.38229	400.00000	K562	RBM15
chrX	73070794	73070807	-	intron-Distal	3.14750	32.54179	K562	UCHL5
chrX	73071559	73071617	-	intron-Distal	3.51812	29.69443	K562	NIPBL
chrX	73057280	73057351	-	intron-Distal,intron-Proximal	5.34793	22.54843	K562	U2AF2
chrX	73071691	73071773	-	intron-Distal	3.22808	39.93081	K562	NIPBL
chrX	73071404	73071442	-	intron-Distal	3.78119	400.00000	K562	UCHL5
chrX	73072058	73072095	-	intron-Distal	3.84862	37.41176	K562	SRSF1
chrX	73070361	73070409	-	intron-Distal	3.31308	23.17089	K562	UCHL5
chrX	73046370	73046437	-	intron-Distal,intron-Proximal	4.04214	11.02703	K562	TIA1
chrX	73040532	73040617	-	intron-Distal	6.20923	30.35344	K562	ZC3H11A
chrX	73061217	73061316	-	intron-Distal	3.27960	10.84900	K562	SRSF1
chrX	73041952	73042002	-	intron-Distal	3.86131	10.60952	K562	ZC3H11A
chrX	73048787	73048883	-	intron-Distal,intron-Proximal	3.67087	4.06013	K562	PRPF8
chrX	73070704	73070723	-	intron-Distal	3.73282	35.76298	K562	EXOSC5
chrX	73047555	73047577	-	intron-Distal,intron-Proximal	3.63287	15.35101	K562	MATR3
chrX	73047695	73047727	-	intron-Distal	5.70029	400.00000	K562	PTBP1
chrX	73071467	73071507	-	intron-Distal	4.23340	49.73755	K562	HNRNPM
chrX	73053072	73053081	-	intron-Distal,intron-Proximal	3.13001	13.52450	K562	UCHL5
chrX	73071547	73071567	-	intron-Distal	3.52147	400.00000	K562	UCHL5
chrX	73072462	73072474	-	intron-Distal	3.77511	52.18322	K562	UCHL5
chrX	73047399	73047434	-	intron-Distal	3.38501	16.45917	K562	MATR3
chrX	73071701	73071764	-	intron-Distal	3.77246	400.00000	K562	UCHL5
chrX	73047175	73047284	-	intron-Distal	4.57199	58.91603	K562	MATR3
chrX	73047730	73047792	-	intron-Distal	5.34653	400.00000	K562	PTBP1
chrX	73047480	73047555	-	intron-Distal,intron-Proximal	3.40579	52.92057	K562	MATR3
chrX	73062429	73062461	-	intron-Distal	3.71532	32.28798	K562	HNRNPK
chrX	73065032	73065063	-	intron-Distal	5.12533	34.04486	K562	HNRNPK
chrX	73046491	73046575	-	intron-Distal	3.48594	27.81220	K562	UCHL5
chrX	73071903	73071936	-	intron-Distal	3.54521	44.83310	K562	UCHL5
chrX	73072352	73072377	-	intron-Distal	4.62203	82.35940	K562	UCHL5
chrX	73072268	73072292	-	intron-Distal	3.45784	11.98230	K562	SRSF1
chrX	73072028	73072044	-	intron-Distal	4.07543	400.00000	K562	RBM15
chrX	73040810	73040925	-	intron-Distal	6.26846	23.01761	K562	NOLC1
chrX	73071546	73071586	-	intron-Distal	3.86682	79.95829	K562	EXOSC5
chrX	73066443	73066512	-	intron-Distal	3.83555	30.27535	K562	HNRNPK
chrX	73047392	73047420	-	intron-Distal	5.05746	400.00000	K562	PTBP1
chrX	73062469	73062505	-	intron-Distal	4.55774	29.62578	K562	HNRNPK
chrX	73047120	73047125	-	intron-Distal	4.98138	35.35811	K562	PTBP1
chrX	73071321	73071372	-	intron-Distal	5.12120	42.31767	K562	HNRNPM
chrX	73047160	73047221	-	intron-Distal	6.21010	400.00000	K562	PTBP1
chrX	73047552	73047577	-	intron-Distal,intron-Proximal	5.31160	80.10838	K562	PTBP1
chrX	73072507	73072530	-	intron-Distal	5.34357	37.84652	K562	RBM15
chrX	73046917	73046983	-	intron-Distal	3.01369	32.00636	K562	UCHL5
chrX	73071899	73071937	-	intron-Distal	4.62521	400.00000	K562	RBM15
chrX	73072056	73072092	-	intron-Distal	3.89709	71.94885	K562	UCHL5
chrX	73047011	73047066	-	intron-Distal	4.23346	18.10147	K562	TARDBP
chrX	73065573	73065624	-	intron-Distal	4.40316	52.92489	K562	HNRNPK
chrX	73071105	73071143	-	intron-Distal	3.05501	3.21470	K562	HNRNPUL1
chrX	73070435	73070494	-	intron-Distal	3.79331	16.96345	K562	RBM15
chrX	73066174	73066235	-	intron-Distal	3.80062	26.36104	K562	HNRNPK
chrX	73050986	73051048	-	intron-Distal,intron-Proximal	4.67721	67.29964	K562	ILF3
chrX	73071215	73071259	-	intron-Distal	3.52913	400.00000	K562	UCHL5
chrX	73070383	73070412	-	intron-Distal	5.69025	33.75016	K562	HNRNPM
chrX	73067685	73067713	-	intron-Distal	5.29568	20.84382	K562	HNRNPK
chrX	73071195	73071273	-	intron-Distal	4.31457	81.19234	K562	EXOSC5
chrX	73047066	73047148	-	intron-Distal	4.94048	61.34899	K562	TARDBP
chrX	73046741	73046803	-	intron-Distal	4.68521	14.56239	K562	GRWD1
chrX	73048850	73048905	-	intron-Distal,intron-Proximal	6.20859	13.68711	K562	AQR
chrX	73072080	73072093	-	intron-Distal	3.93892	400.00000	K562	RBM15
chrX	73047652	73047695	-	intron-Distal	5.97480	400.00000	K562	PTBP1
chrX	73046745	73046799	-	intron-Distal	3.56588	21.39017	K562	UCHL5
chrX	73071352	73071373	-	intron-Distal	3.33437	32.03632	K562	RBM15
chrX	73053150	73053210	-	intron-Distal,intron-Proximal	3.24349	5.60102	K562	GRWD1
chrX	73070386	73070402	-	intron-Distal	3.46336	6.19583	K562	RBM15
chrX	73070297	73070306	-	intron-Distal	4.20184	14.31911	K562	TIA1
chrX	73065063	73065108	-	intron-Distal	3.28796	16.29521	K562	HNRNPK
chrX	73047577	73047629	-	intron-Distal,intron-Proximal	5.07465	400.00000	K562	PTBP1
chrX	73071588	73071597	-	intron-Distal	3.83480	400.00000	K562	UCHL5
chrX	73070418	73070459	-	intron-Distal	5.34556	19.73958	K562	HNRNPK
chrX	73071539	73071547	-	intron-Distal	3.31541	31.64921	K562	UCHL5
chrX	73072047	73072056	-	intron-Distal	3.52766	41.98063	K562	UCHL5
chrX	73046409	73046430	-	intron-Distal	3.63633	4.89200	K562	ZC3H11A
chrX	73065624	73065646	-	intron-Distal	4.60084	36.59186	K562	HNRNPK
chrX	73067191	73067214	-	intron-Distal	3.51279	8.24669	K562	HNRNPK
chrX	73070769	73070834	-	intron-Distal	5.49320	55.02630	K562	HNRNPM
chrX	73071028	73071086	-	intron-Distal	6.76019	126.43882	K562	HNRNPM
chrX	73065876	73065957	-	intron-Distal	4.91957	54.82775	K562	HNRNPK
chrX	73071208	73071276	-	intron-Distal	3.48575	9.87196	K562	RBM22
chrX	73071884	73071895	-	intron-Distal	3.48475	54.74642	K562	RBM15
chrX	73071548	73071606	-	intron-Distal	3.86244	400.00000	K562	RBM15
chrX	73065318	73065386	-	intron-Distal	5.51115	81.04019	K562	HNRNPK
chrX	73070459	73070532	-	intron-Distal	4.61726	33.33716	K562	HNRNPK
chrX	73071953	73071971	-	intron-Distal	4.52813	60.85842	K562	RBM15
chrX	73071629	73071655	-	intron-Distal	4.04744	400.00000	K562	UCHL5
chrX	73072044	73072056	-	intron-Distal	3.74691	400.00000	K562	RBM15
chrX	73040834	73040896	-	intron-Distal	3.72854	12.30533	K562	ZC3H11A
chrX	73071287	73071321	-	intron-Distal	6.42365	400.00000	K562	HNRNPM
chrX	73070986	73071003	-	intron-Distal	3.65566	46.63823	K562	UCHL5
chrX	73047002	73047047	-	intron-Distal	4.34513	10.20505	K562	RBM15
chrX	73071256	73071287	-	intron-Distal	6.25713	400.00000	K562	HNRNPM
chrX	73072147	73072166	-	intron-Distal	4.02661	42.06241	K562	UCHL5
chrX	73070983	73071028	-	intron-Distal	5.18742	46.84357	K562	HNRNPM
chrX	73071996	73072028	-	intron-Distal	4.77611	88.25143	K562	RBM15
chrX	73067663	73067685	-	intron-Distal	4.94231	22.74759	K562	HNRNPK
chrX	73072100	73072137	-	intron-Distal	4.13360	67.23164	K562	RBM15
chrX	73071543	73071583	-	intron-Distal	3.87716	19.21755	K562	HNRNPM
chrX	73071766	73071807	-	intron-Distal	5.72044	400.00000	K562	RBM15
chrX	73072137	73072183	-	intron-Distal	4.78189	400.00000	K562	RBM15
chrX	73071344	73071390	-	intron-Distal	3.81327	29.84949	K562	EXOSC5
chrX	73070956	73071013	-	intron-Distal	3.65980	47.74485	K562	EXOSC5
chrX	73072028	73072058	-	intron-Distal	3.59023	24.35928	K562	SRSF1
chrX	73065269	73065318	-	intron-Distal	6.48647	93.56397	K562	HNRNPK
chrX	73040922	73040985	-	intron-Distal	3.59679	17.50093	K562	ZC3H11A
chrX	73068300	73068332	-	intron-Distal	5.24785	24.71100	K562	HNRNPK
chrX	73047229	73047275	-	intron-Distal	5.73260	400.00000	K562	PTBP1
chrX	73071567	73071588	-	intron-Distal	3.64235	400.00000	K562	UCHL5
chrX	73070464	73070527	-	intron-Distal	4.25783	25.95511	K562	ILF3
chrX	73062905	73062937	-	intron-Distal	3.72034	10.20675	K562	HNRNPK
chrX	73071203	73071255	-	intron-Distal	4.48571	71.56083	K562	RBM15
chrX	73070766	73070826	-	intron-Distal	3.74598	32.29545	K562	EXOSC5
chrX	73066570	73066623	-	intron-Distal	3.02127	3.61789	K562	HNRNPC
chrX	73071971	73071983	-	intron-Distal	4.40300	57.96960	K562	RBM15
chrX	73071704	73071754	-	intron-Distal	4.47684	44.24060	K562	SRSF1
chrX	73072482	73072541	-	intron-Distal	4.18462	24.37765	K562	SRSF1
chrX	73047296	73047343	-	intron-Distal	3.15988	16.02100	K562	TIA1
chrX	73062595	73062671	-	intron-Distal	3.99414	31.92292	K562	HNRNPK
chrX	73047869	73047948	-	intron-Distal	4.19963	4.89208	K562	AQR
chrX	73046677	73046743	-	intron-Distal,intron-Proximal	4.42610	8.80468	K562	TRA2A
chrX	73040925	73041011	-	intron-Distal	3.41866	10.49208	K562	NOLC1
chrX	73072226	73072268	-	intron-Distal	3.68373	18.61520	K562	SRSF1
chrX	73040695	73040768	-	intron-Distal	4.76793	12.99588	K562	NOLC1
chrX	73046912	73046994	-	intron-Distal	3.13973	30.85465	K562	ZNF622
chrX	73071459	73071510	-	intron-Distal	3.19677	42.42640	K562	UCHL5
chrX	73064855	73064901	-	intron-Distal	3.20913	9.71379	K562	HNRNPK
chrX	73071768	73071796	-	intron-Distal	4.78077	22.37320	K562	SRSF1
chrX	73071895	73071899	-	intron-Distal	3.38862	36.34379	K562	RBM15
chrX	73071272	73071277	-	intron-Distal	3.24011	30.39677	K562	UCHL5
chrX	73071807	73071854	-	intron-Distal	4.76375	27.22454	K562	SRSF1
chrX	73050624	73050696	-	intron-Distal	4.87907	6.81444	K562	RBFOX2
chrX	73040573	73040641	-	intron-Distal	3.48952	7.12719	K562	NOLC1
chrX	73071757	73071766	-	intron-Distal	5.13940	400.00000	K562	RBM15
chrX	73068301	73068338	-	intron-Distal	3.21305	6.90237	K562	HNRNPU
chrX	73072353	73072387	-	intron-Distal	3.20211	9.46829	K562	SRSF1
chrX	73071507	73071516	-	intron-Distal	4.76265	36.74870	K562	HNRNPM
chrX	73072186	73072223	-	intron-Distal	4.81953	400.00000	K562	RBM15
chrX	73071796	73071805	-	intron-Distal	3.89148	17.95472	K562	SRSF1
chrX	73071444	73071524	-	intron-Distal	3.37473	11.45219	K562	TARDBP
chrX	73067680	73067684	-	intron-Distal	4.50507	17.82282	K562	LIN28B
chrX	73071096	73071153	-	intron-Distal	4.68000	48.66593	K562	EXOSC5
chrX	73047456	73047477	-	intron-Distal,intron-Proximal	3.42943	9.36619	K562	MATR3
chrX	73071195	73071215	-	intron-Distal	3.74994	79.95853	K562	UCHL5
chrX	73067641	73067663	-	intron-Distal	5.20913	16.84996	K562	HNRNPK
chrX	73070467	73070512	-	intron-Distal	3.60991	26.20308	K562	DROSHA
chrX	73071375	73071387	-	intron-Distal	4.46393	400.00000	K562	UCHL5
chrX	73046983	73047056	-	intron-Distal	3.22385	29.61703	K562	UCHL5
chrX	73047298	73047352	-	intron-Distal	5.66592	400.00000	K562	PTBP1
chrX	73065247	73065269	-	intron-Distal	5.87054	15.71799	K562	HNRNPK
chrX	73064006	73064056	-	intron-Distal	3.46811	14.89970	K562	HNRNPK
chrX	73071652	73071693	-	intron-Distal	4.21778	69.25415	K562	RBM15
chrX	73066845	73066881	-	intron-Distal	4.13264	7.89172	K562	HNRNPU
chrX	73071686	73071764	-	intron-Distal	3.31890	12.94497	K562	RBM22
chrX	73046743	73046870	-	intron-Distal	3.05873	8.11359	K562	TRA2A
chrX	73069462	73069505	-	intron-Distal	4.12303	18.84998	K562	HNRNPK
chrX	73071387	73071404	-	intron-Distal	4.13015	76.42596	K562	UCHL5
chrX	73047445	73047478	-	intron-Distal,intron-Proximal	5.28895	78.42061	K562	PTBP1
chrX	73047478	73047545	-	intron-Distal,intron-Proximal	5.48811	400.00000	K562	PTBP1
chrX	73071956	73071984	-	intron-Distal	4.08626	14.46937	K562	SRSF1
chrX	73067608	73067680	-	intron-Distal	3.37952	14.60117	K562	LIN28B
chrX	73069505	73069567	-	intron-Distal	4.07830	31.53627	K562	HNRNPK
chrX	73070664	73070707	-	intron-Distal	3.33790	25.02269	K562	HNRNPM
chrX	73071708	73071717	-	intron-Distal	4.89690	67.36785	K562	RBM15
chrX	73070461	73070519	-	intron-Distal	4.99642	8.21929	K562	PCBP1
chrX	73050932	73050986	-	intron-Distal	4.26149	27.54062	K562	ILF3
chrX	73071336	73071375	-	intron-Distal	4.56058	400.00000	K562	UCHL5
chrX	73072095	73072138	-	intron-Distal	3.94212	21.12163	K562	SRSF1
chrX	73053158	73053210	-	intron-Distal,intron-Proximal	3.38796	4.49614	K562	SRSF1
chrX	73047420	73047432	-	intron-Distal	4.72643	64.47455	K562	PTBP1
chrX	73072456	73072474	-	intron-Distal	3.94443	13.92812	K562	SRSF1
chrX	73070894	73070956	-	intron-Distal	3.73155	59.13863	K562	EXOSC5
chrX	73071781	73071805	-	intron-Distal	3.97653	48.25425	K562	UCHL5
chrX	73062816	73062850	-	intron-Distal	3.77542	10.50896	K562	HNRNPK
chrX	73064949	73065032	-	intron-Distal	5.01043	42.81836	K562	HNRNPK
chrX	73072190	73072226	-	intron-Distal	4.06476	21.99671	K562	SRSF1
chrX	73071586	73071625	-	intron-Distal	3.94799	61.25837	K562	EXOSC5
chrX	73071388	73071403	-	intron-Distal	3.54140	4.88790	K562	RBM22
chrX	73047664	73047694	-	intron-Distal	4.83807	23.76218	K562	MATR3
chrX	73062392	73062429	-	intron-Distal	3.35996	28.74698	K562	HNRNPK
chrX	73065454	73065489	-	intron-Distal	4.17970	16.43881	K562	HNRNPK
chrX	73071854	73071897	-	intron-Distal	5.45376	45.41284	K562	SRSF1
chrX	73070412	73070488	-	intron-Distal	5.49700	48.63255	K562	HNRNPM
chrX	73047474	73047541	-	intron-Distal,intron-Proximal	3.41811	15.93738	K562	TIA1
chrX	73070236	73070262	-	intron-Distal	4.11592	27.27501	K562	KHSRP
chrX	73045066	73045096	-	intron-Distal	4.28990	5.17470	K562	HNRNPU
chrX	73045182	73045244	-	intron-Distal	5.71259	12.21711	K562	LIN28B
chrX	73069567	73069592	-	intron-Distal	3.83974	18.19028	K562	HNRNPK
chrX	73070356	73070390	-	intron-Distal	3.64726	3.88359	K562	MTPAP
chrX	73070370	73070386	-	intron-Distal	4.48818	10.06857	K562	RBM15
chrX	73071717	73071749	-	intron-Distal	5.09238	400.00000	K562	RBM15
chrX	73071549	73071591	-	intron-Distal	3.92069	8.37718	K562	RBM22
chrX	73071189	73071256	-	intron-Distal	4.93612	400.00000	K562	HNRNPM
chrX	73071597	73071606	-	intron-Distal	4.27257	400.00000	K562	UCHL5
chrX	73072063	73072080	-	intron-Distal	3.90607	400.00000	K562	RBM15
chrX	73071780	73071801	-	intron-Distal	4.14766	16.35622	K562	EXOSC5
chrX	73071808	73071855	-	intron-Distal	3.00396	29.18066	K562	NIPBL
chrX	73071627	73071652	-	intron-Distal	4.34996	67.88686	K562	RBM15
chrX	73070254	73070297	-	intron-Distal	4.18426	19.03638	K562	TIA1
chrX	73070238	73070311	-	intron-Distal	3.39687	21.74437	K562	EXOSC5
chrX	73041033	73041076	-	intron-Distal	3.22128	5.46637	K562	NOLC1
chrX	73070332	73070471	-	intron-Distal	3.83930	17.99148	K562	SRSF1
chrX	73070426	73070467	-	intron-Distal	3.99074	26.69560	K562	DROSHA
chrX	73046680	73046740	-	intron-Distal,intron-Proximal	3.45386	20.32308	K562	UCHL5
chrX	73072435	73072456	-	intron-Distal	4.00112	15.01159	K562	SRSF1
chrX	73072223	73072246	-	intron-Distal	4.51207	400.00000	K562	RBM15
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for XIST is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for XIST is not available on ENCORE database.
71 RBPs can affect the levels of XIST.

The Knockdown/knockout RNA-Seq assay for XIST is not available on ENCORE database.

71 RBPs can affect the gene expression of XIST :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
XIST	ENSG00000229807.5	37.21420	12.20080	1.60880	2.45030	1.73430	HepG2	CNOT7
XIST	ENSG00000229807.5	22.37320	3.67190	2.60710	2.75850	2.06630	HepG2	HNRNPC
XIST	ENSG00000229807.5	26.11110	7.04540	1.88980	2.42180	1.66260	HepG2	MSI2
XIST	ENSG00000229807.5	22.42640	4.85400	2.20790	2.45990	1.86480	HepG2	QKI
XIST	ENSG00000229807.5	2.97190	13.64440	-2.19890	1.89640	1.33560	HepG2	SF3A3
XIST	ENSG00000229807.5	20.10780	3.96270	2.34310	2.86250	2.30350	HepG2	SRSF9
XIST	ENSG00000229807.5	46.68310	4.09330	3.51140	8.36500	7.19620	HepG2	TARDBP
XIST	ENSG00000229807.5	24224.75780	36950.12190	-0.60910	28.44670	26.72250	K562	AGGF1
XIST	ENSG00000229807.5	25874.09190	40600.74790	-0.65000	9.16240	7.08650	K562	AKAP8
XIST	ENSG00000229807.5	24771.27550	38447.82150	-0.63420	12.31920	10.80310	K562	AKAP8L
XIST	ENSG00000229807.5	24878.76130	33731.50470	-0.43920	6.30860	4.32090	K562	APOBEC3C
XIST	ENSG00000229807.5	14339.64200	24545.26950	-0.77540	13.22340	12.07700	K562	AQR
XIST	ENSG00000229807.5	27311.69300	40340.15980	-0.56270	16.20580	13.79090	K562	ATP5C1
XIST	ENSG00000229807.5	12554.56100	15074.27290	-0.26390	5.49730	4.12890	K562	BCLAF1
XIST	ENSG00000229807.5	20968.09360	25373.31190	-0.27510	2.36010	1.56150	K562	BOP1
XIST	ENSG00000229807.5	25551.46300	44158.90210	-0.78930	24.75880	21.55860	K562	CCDC124
XIST	ENSG00000229807.5	22285.78820	26977.42220	-0.27560	2.89910	2.09770	K562	CPSF6
XIST	ENSG00000229807.5	9215.86880	11436.07940	-0.31140	3.27100	2.10740	K562	CSTF2
XIST	ENSG00000229807.5	18956.83670	22222.25070	-0.22930	3.66210	2.26820	K562	DDX21
XIST	ENSG00000229807.5	25053.46860	35567.08430	-0.50550	10.65650	9.47250	K562	DDX47
XIST	ENSG00000229807.5	27270.18240	41375.46480	-0.60150	19.99560	17.27930	K562	DKC1
XIST	ENSG00000229807.5	9023.34930	13185.53810	-0.54720	4.81700	3.08570	K562	EEF2
XIST	ENSG00000229807.5	8933.94570	12740.23130	-0.51200	6.58680	5.13020	K562	EFTUD2
XIST	ENSG00000229807.5	11949.89830	14040.63830	-0.23260	3.05000	2.21520	K562	EIF3G
XIST	ENSG00000229807.5	10185.32160	15257.77410	-0.58310	9.85010	8.29100	K562	EIF4A3
XIST	ENSG00000229807.5	11507.55730	13318.47040	-0.21080	2.69350	1.42340	K562	EWSR1
XIST	ENSG00000229807.5	14297.71970	24458.13650	-0.77450	7.50390	6.04270	K562	FIP1L1
XIST	ENSG00000229807.5	21125.33260	27452.15550	-0.37790	3.33440	2.39020	K562	FMR1
XIST	ENSG00000229807.5	9678.80350	15867.43990	-0.71320	27.66700	25.88410	K562	FXR1
XIST	ENSG00000229807.5	25191.29320	17559.11770	0.52060	4.38660	3.45180	K562	G3BP2
XIST	ENSG00000229807.5	24874.40410	20940.58100	0.24830	3.53080	2.24410	K562	GLRX3
XIST	ENSG00000229807.5	19851.13250	25755.44870	-0.37570	3.02620	2.19680	K562	GPKOW
XIST	ENSG00000229807.5	14253.66940	23787.61760	-0.73890	18.08500	16.08960	K562	GRSF1
XIST	ENSG00000229807.5	10777.41930	20115.90380	-0.90030	9.49380	7.54940	K562	HNRNPM
XIST	ENSG00000229807.5	19920.80360	33161.81140	-0.73520	8.22900	6.87130	K562	HSPD1
XIST	ENSG00000229807.5	30023.51700	40804.34370	-0.44260	7.79300	6.23500	K562	KIF1C
XIST	ENSG00000229807.5	17428.58230	14112.01690	0.30440	3.24670	1.71230	K562	LARP7
XIST	ENSG00000229807.5	12476.34550	17896.74940	-0.52050	8.81540	7.27080	K562	MAGOH
XIST	ENSG00000229807.5	24563.55010	39058.50320	-0.66910	15.01480	11.87300	K562	MAK16
XIST	ENSG00000229807.5	12491.00670	17861.19850	-0.51590	8.45790	6.74320	K562	MATR3
XIST	ENSG00000229807.5	26849.39930	45710.94900	-0.76760	21.14990	18.33830	K562	MBNL1
XIST	ENSG00000229807.5	18537.06780	25140.76220	-0.43960	6.75710	5.35590	K562	METAP2
XIST	ENSG00000229807.5	22762.74850	32039.92440	-0.49320	4.25700	3.09300	K562	NAA15
XIST	ENSG00000229807.5	6889.46620	12551.57540	-0.86540	4.49330	2.72660	K562	NONO
XIST	ENSG00000229807.5	7223.50880	13365.94000	-0.88780	9.67680	6.40620	K562	PA2G4
XIST	ENSG00000229807.5	12717.33690	15924.58300	-0.32450	3.63410	2.51580	K562	PCBP2
XIST	ENSG00000229807.5	27197.86850	21448.43720	0.34250	2.90430	2.05130	K562	PCBP3
XIST	ENSG00000229807.5	6484.27080	12070.64840	-0.89650	10.63540	7.22370	K562	PES1
XIST	ENSG00000229807.5	14452.10770	27763.00180	-0.94190	12.35260	10.23500	K562	PPIG
XIST	ENSG00000229807.5	4664.73990	12397.69410	-1.41020	45.24260	42.41850	K562	PRPF8
XIST	ENSG00000229807.5	11566.48170	17387.44130	-0.58810	10.47090	9.23730	K562	PTBP1
XIST	ENSG00000229807.5	26497.67980	41709.42940	-0.65450	12.82510	11.05500	K562	PUF60
XIST	ENSG00000229807.5	34712.82670	43468.43820	-0.32450	3.99320	2.83690	K562	PUM2
XIST	ENSG00000229807.5	32094.33050	38132.94850	-0.24870	2.09410	1.60920	K562	PUS1
XIST	ENSG00000229807.5	24002.92310	37152.11240	-0.63020	19.90280	18.27470	K562	RBM15
XIST	ENSG00000229807.5	10849.72920	16675.19620	-0.62000	10.48430	8.68930	K562	RBM22
XIST	ENSG00000229807.5	6030.99950	12628.95130	-1.06630	20.43970	18.25090	K562	RPS19
XIST	ENSG00000229807.5	15967.51990	20408.16980	-0.35400	2.64500	1.66780	K562	RPS3
XIST	ENSG00000229807.5	5472.92320	12676.67540	-1.21180	19.77560	16.49290	K562	RRP9
XIST	ENSG00000229807.5	19594.30130	24499.26530	-0.32230	2.52440	1.59700	K562	SF3B1
XIST	ENSG00000229807.5	14859.39500	18262.36860	-0.29750	3.91190	2.89010	K562	SF3B4
XIST	ENSG00000229807.5	9898.54120	12379.28220	-0.32260	3.01150	1.30580	K562	SRP68
XIST	ENSG00000229807.5	28359.00260	24729.23050	0.19750	4.56190	3.39390	K562	SRPK2
XIST	ENSG00000229807.5	9697.17570	17044.93140	-0.81370	18.22340	16.43480	K562	SRSF1
XIST	ENSG00000229807.5	8510.48360	12004.54930	-0.49630	4.63510	3.29340	K562	SUPV3L1
XIST	ENSG00000229807.5	12277.80320	16501.42850	-0.42650	7.54570	6.17870	K562	SYNCRIP
XIST	ENSG00000229807.5	13313.05320	17251.78520	-0.37390	3.82790	2.98950	K562	TARDBP
XIST	ENSG00000229807.5	8080.34510	10942.36680	-0.43740	4.18930	2.14390	K562	TFIP11
XIST	ENSG00000229807.5	13606.85930	16640.97900	-0.29040	3.59050	2.63990	K562	TIA1
XIST	ENSG00000229807.5	21279.73040	17024.96120	0.32170	2.41990	1.40730	K562	U2AF1
XIST	ENSG00000229807.5	27669.94790	23079.18140	0.26160	6.54550	5.29550	K562	WDR43
XIST	ENSG00000229807.5	9282.83280	12936.41360	-0.47880	5.50840	3.58530	K562	XRN2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for XIST is not available on ENCORE database.

9 RBPs can affect the splicing of XIST :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	XIST	ENSG00000229807.5	chrX	-	73053072	73053209			73050900	73051109	73057274	73057338	-0.06000	0.00436	0.06658	excluded	K562	SF3B4
SE	XIST	ENSG00000229807.5	chrX	-	73057274	73057338			73050900	73051109	73061216	73072588	-0.05500	0.00133	0.01549	excluded	K562	AQR
SE	XIST	ENSG00000229807.5	chrX	-	73041905	73042051			73040490	73040864	73045949	73046182	0.21200	0.00173	0.03503	included	K562	U2AF1
A3SS	XIST	ENSG00000229807.5	chrX	-	73041905	73042068			73041905	73042051	73045949	73046182	0.18800	0.00015	0.00934	longer	K562	U2AF1
MXE	XIST	ENSG00000229807.5	chrX	-	73053072	73053209	73057274	73057338	73050900	73051109	73061216	73072588	0.09500	0.00000	0.00000	1included	K562	DROSHA
MXE	XIST	ENSG00000229807.5	chrX	-	73050900	73051041	73053072	73053209	73048922	73049066	73057274	73057338	-0.14300	0.00216	0.03069	2included	K562	DROSHA
MXE	XIST	ENSG00000229807.5	chrX	-	73050900	73051109	73057274	73057338	73048902	73049066	73061216	73072588	-0.07800	0.01053	0.06599	2included	K562	AQR
MXE	XIST	ENSG00000229807.5	chrX	-	73053072	73053209	73057274	73057338	73050900	73051041	73061216	73061505	-0.12100	0.00015	0.00341	2included	K562	U2AF2
MXE	XIST	ENSG00000229807.5	chrX	-	73050900	73051109	73053072	73053209	73048902	73049066	73057274	73057338	0.10800	0.00168	0.07206	1included	K562	PHF6
MXE	XIST	ENSG00000229807.5	chrX	-	73053072	73053209	73057274	73057338	73050900	73051109	73061216	73072588	-0.12300	0.00026	0.01446	2included	K562	HNRNPU
MXE	XIST	ENSG00000229807.5	chrX	-	73050900	73051041	73053072	73053209	73048922	73049066	73057274	73057338	0.16000	0.00002	0.00172	1included	K562	DHX30
MXE	XIST	ENSG00000229807.5	chrX	-	73053072	73053209	73057274	73057338	73050900	73051109	73061216	73072588	-0.09700	0.00002	0.00181	2included	K562	DHX30
MXE	XIST	ENSG00000229807.5	chrX	-	73053072	73053209	73057274	73057338	73050900	73051109	73061216	73072588	0.05500	0.00000	0.00000	1included	K562	HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

XIST

General Information

Functions

Localization

Domains (AlphaFold: XIST)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for XIST is not avaliable on ENCORE database.

33 proteins are bound to XIST RNA:

eCLIP assay for XIST is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for XIST is not available on ENCORE database.

71 RBPs can affect the gene expression of XIST :

The Knockdown/knockout RNA-Seq assay for XIST is not available on ENCORE database.

9 RBPs can affect the splicing of XIST :

The Knockdown/knockout RNA-Seq assay for XIST is not avaliable on ENCORE database.