TXNDC11

General Information

Gene Name       : TXNDC11
Gene ID             : ENSG00000153066.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TXNDC11)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TXNDC11ENSG00000153066.1231.5027.7329.62ENCSR000AEF
HepG2TXNDC11ENSG00000153066.1263.2748.9156.09ENCSR985KAT
K562TXNDC11ENSG00000153066.1220.0319.6119.82ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TXNDC11 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TXNDC11 RNA is bound by 27 proteins.  







eCLIP assay for TXNDC11 is not avaliable on ENCORE database.





27 proteins are bound to TXNDC11 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr161179214411792211-3'-UTR,CDS,intron-Distal,intron-Proximal3.841465.73990HepG2PRPF8
chr161179214611792196-3'-UTR,CDS,intron-Distal,intron-Proximal3.309433.75245K562BUD13
chr161178581711785878-3'-UTR,CDS,intron-Distal,intron-Proximal4.062333.81597K562RBM15
chr161179214011792227-3'-UTR,CDS,intron-Distal,intron-Proximal4.917246.38747HepG2AQR
chr161177296011773049-3'-UTR,intron-Distal4.367274.95761HepG2ZC3H11A
chr161183660011836681-5'-UTR,intron-Distal,intron-Proximal3.060089.22959HepG2NCBP2
chr161183661211836700-5'-UTR,intron-Distal,intron-Proximal4.469215.23978HepG2PRPF4
chr161181517211815246-5'-UTR,intron-Distal3.877543.37208HepG2ILF3
chr161183660211836700-5'-UTR,intron-Distal,intron-Proximal4.5203131.97090HepG2DDX3X
chr161177797711778041-CDS,intron-Distal,intron-Proximal4.401033.59236HepG2AQR
chr161183634711836391-CDS,intron-Distal3.2274511.10936HepG2DDX3X
chr161183641611836473-CDS,intron-Distal,intron-Proximal5.3277822.82000HepG2DDX3X
chr161178559511785649-CDS,intron-Distal3.825374.51666K562RBM15
chr161183623511836351-CDS,intron-Distal3.218778.55497HepG2EFTUD2
chr161178538811785438-CDS,intron-Distal4.592524.88132HepG2RBM15
chr161178560211785650-CDS,intron-Distal4.324503.80461HepG2RBM15
chr161178537611785441-CDS,intron-Distal4.518885.51215K562RBM15
chr161178175111781807-CDS,intron-Distal3.768363.39858K562IGF2BP2
chr161178220011782256-CDS,intron-Distal3.595474.60014HepG2IGF2BP1
chr161178530311785383-CDS,intron-Distal3.620795.35244HepG2IGF2BP1
chr161178550911785569-CDS,intron-Distal3.108733.08662K562YBX3
chr161177339211773483-CDS,intron-Distal3.063383.03966HepG2SND1
chr161183632211836349-CDS,intron-Distal3.570287.39618HepG2PRPF8
chr161183653111836584-CDS,intron-Distal4.074956.37985HepG2NCBP2
chr161183647311836566-CDS,intron-Distal,intron-Proximal3.8842729.37057HepG2DDX3X
chr161178171611781809-CDS,intron-Distal3.921654.23146HepG2IGF2BP3
chr161183628911836335-CDS,intron-Distal5.061993.59236HepG2AQR
chr161178172111781757-CDS,intron-Distal4.584684.67689HepG2PPIG
chr161177796411778116-CDS,intron-Distal,intron-Proximal3.711236.88667K562BUD13
chr161178171711781811-CDS,intron-Distal3.596357.34809HepG2IGF2BP1
chr161177358211773624-CDS,intron-Distal3.247313.34231K562RBM15
chr161178522211785274-CDS,intron-Distal3.586344.01163K562RBM15
chr161179581311795877-intron-Distal3.029483.33412HepG2HNRNPL
chr161183628211836333-intron-Distal4.027314.98250K562AQR
chr161182978711829873-intron-Distal,intron-Proximal4.060864.98250K562AQR
chr161179067411790804-intron-Distal5.4773810.20783HepG2HNRNPM
chr161179602611796137-intron-Distal4.048754.02823K562HNRNPL
chr161179862911798684-intron-Distal3.521414.38996HepG2HNRNPM
chr161181192011811981-intron-Distal4.024876.35159HepG2RBFOX2
chr161180356111803628-intron-Distal4.296324.12401HepG2U2AF2
chr161181587311815936-intron-Distal4.007033.24603K562KHSRP
chr161182550811825593-intron-Distal4.432135.54597K562TARDBP
chr161179247411792514-intron-Distal3.678573.66782HepG2HNRNPM
chr161179824411798309-intron-Distal3.045983.10883HepG2SUGP2
chr161179244811792474-intron-Distal4.116153.97018HepG2HNRNPM
chr161181327511813321-intron-Distal3.301125.13070HepG2HNRNPM
chr161183624311836304-intron-Distal4.0535511.14359HepG2RBM22
chr161181996911820065-intron-Distal3.580365.69912HepG2ILF3
chr161181355111813593-intron-Distal3.526144.61500HepG2HNRNPM
chr161183628811836322-intron-Distal4.2254110.01959HepG2PRPF8
chr161181046411810530-intron-Distal4.277347.29386HepG2U2AF2
chr161179266211792713-intron-Distal4.172827.32988HepG2HNRNPM
chr161181121611811291-intron-Distal3.197923.42293HepG2HNRNPC
chr161177795011778021-intron-Distal,intron-Proximal3.427894.88100K562AQR
chr161179476711794826-intron-Distal4.020713.40352HepG2HNRNPUL1
chr161180810111808192-intron-Distal3.166903.96925HepG2ILF3
chr161181531311815422-intron-Distal,intron-Proximal3.666844.72639K562KHSRP
chr161179722611797282-intron-Distal4.735313.83958HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TXNDC11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TXNDC11 is not available on ENCORE database.

  • 92 RBPs can affect the levels of TXNDC11.  








The Knockdown/knockout RNA-Seq assay for TXNDC11 is not available on ENCORE database.





92 RBPs can affect the gene expression of TXNDC11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TXNDC11ENSG00000153066.81085.942201450.68780-0.417803.869302.61630HepG2AATF
TXNDC11ENSG00000153066.81863.167702554.82480-0.455503.488002.43380HepG2ABCF1
TXNDC11ENSG00000153066.81495.107501899.92670-0.345705.581604.77810HepG2ACO1
TXNDC11ENSG00000153066.81609.460902824.70900-0.811509.817208.88210HepG2AKAP1
TXNDC11ENSG00000153066.81338.022401777.52000-0.409804.881603.89410HepG2CALR
TXNDC11ENSG00000153066.82699.906802220.461200.282002.013801.34760HepG2CIRBP
TXNDC11ENSG00000153066.81349.892701899.38580-0.4927011.3326010.17030HepG2CKAP4
TXNDC11ENSG00000153066.81829.047801416.432500.368704.854503.50870HepG2YBX3
TXNDC11ENSG00000153066.82963.979102099.247800.4976010.921109.81000HepG2CELF1
TXNDC11ENSG00000153066.82802.758502256.869900.312405.049104.09140HepG2DAZAP1
TXNDC11ENSG00000153066.81137.314801757.10110-0.6276016.2718014.63620HepG2DDX19B
TXNDC11ENSG00000153066.82502.464301839.155900.444204.789603.11100HepG2DDX47
TXNDC11ENSG00000153066.81041.438001458.38750-0.485805.496203.65930HepG2DDX52
TXNDC11ENSG00000153066.8902.440301440.19580-0.674403.833302.69090HepG2DDX59
TXNDC11ENSG00000153066.81807.335501341.462300.430004.406303.18100HepG2DHX30
TXNDC11ENSG00000153066.81792.257701390.842200.365704.805403.90140HepG2DNAJC21
TXNDC11ENSG00000153066.81134.782401450.63310-0.354302.556101.48860HepG2EFTUD2
TXNDC11ENSG00000153066.82962.828702234.340200.407003.409902.75570HepG2EIF2S1
TXNDC11ENSG00000153066.81084.380501412.56250-0.381402.706601.81320HepG2EIF3D
TXNDC11ENSG00000153066.81217.075301511.49510-0.312602.779301.69420HepG2EIF3G
TXNDC11ENSG00000153066.82578.120602133.109400.273302.213801.47960HepG2EIF4G2
TXNDC11ENSG00000153066.81771.735502212.70480-0.320602.877901.76490HepG2ESF1
TXNDC11ENSG00000153066.82274.100302855.58240-0.328505.298304.51360HepG2ETF1
TXNDC11ENSG00000153066.81204.499901856.45420-0.624109.270307.76530HepG2EWSR1
TXNDC11ENSG00000153066.81889.439002579.62320-0.449203.655002.77830HepG2FIP1L1
TXNDC11ENSG00000153066.81546.075601090.850600.503102.595501.36210HepG2FKBP4
TXNDC11ENSG00000153066.81574.576401911.65620-0.279902.335901.61020HepG2FUBP3
TXNDC11ENSG00000153066.81677.447702491.70830-0.570906.243305.23090HepG2FXR1
TXNDC11ENSG00000153066.81658.892102311.12470-0.478404.121203.31840HepG2G3BP1
TXNDC11ENSG00000153066.81967.426302453.94730-0.318802.366701.54670HepG2G3BP2
TXNDC11ENSG00000153066.82045.007501437.569900.508404.392103.59750HepG2GPKOW
TXNDC11ENSG00000153066.82296.860601996.227200.202302.000801.38410HepG2HNRNPF
TXNDC11ENSG00000153066.81428.340102340.92380-0.7127010.307309.03590HepG2HNRNPK
TXNDC11ENSG00000153066.82107.284001371.907100.619107.168206.20910HepG2HNRNPLL
TXNDC11ENSG00000153066.8988.033001551.54450-0.6511014.4898013.19320HepG2HNRNPU
TXNDC11ENSG00000153066.81173.507002291.42310-0.9654012.020509.58100HepG2HSPD1
TXNDC11ENSG00000153066.82438.737501965.702800.311003.049602.29200HepG2IGF2BP1
TXNDC11ENSG00000153066.81382.987502204.95990-0.673002.302101.41180HepG2IGF2BP3
TXNDC11ENSG00000153066.82073.886001584.852300.387908.439107.22710HepG2ILF2
TXNDC11ENSG00000153066.81988.293402506.43860-0.334102.203801.63770HepG2MATR3
TXNDC11ENSG00000153066.81906.734201157.345600.720204.597203.43360HepG2PABPC1
TXNDC11ENSG00000153066.81989.606402393.16010-0.266403.641002.96520HepG2PCBP1
TXNDC11ENSG00000153066.81662.946401383.854700.264902.664101.93960HepG2PPIL4
TXNDC11ENSG00000153066.81352.780201892.95600-0.484702.796501.57360HepG2PRPF6
TXNDC11ENSG00000153066.8677.972301010.45960-0.575702.920602.09130HepG2PRPF8
TXNDC11ENSG00000153066.81530.131602435.07480-0.6703017.8967016.73320HepG2PTBP1
TXNDC11ENSG00000153066.81528.424302136.38920-0.483105.576504.76940HepG2PUF60
TXNDC11ENSG00000153066.82937.436502266.256200.374105.267804.35630HepG2PUM2
TXNDC11ENSG00000153066.81275.024301737.69190-0.446602.026301.41380HepG2RAVER1
TXNDC11ENSG00000153066.81296.271802386.73920-0.8807024.6519023.41350HepG2RBM22
TXNDC11ENSG00000153066.81850.138202393.53250-0.371504.144803.33380HepG2RBM25
TXNDC11ENSG00000153066.81764.660702710.05020-0.6189016.1988015.09690HepG2NELFE
TXNDC11ENSG00000153066.81635.301402523.96050-0.6261016.4688015.17030HepG2RECQL
TXNDC11ENSG00000153066.8785.394501374.47440-0.8074013.0601011.84890HepG2RPS19
TXNDC11ENSG00000153066.81205.967401381.72230-0.196301.898701.34850HepG2SAFB2
TXNDC11ENSG00000153066.82168.285702846.32670-0.392502.436101.80510HepG2SF3A3
TXNDC11ENSG00000153066.81650.996202535.32590-0.6188016.0771014.83120HepG2SF3B4
TXNDC11ENSG00000153066.82344.758402048.688600.194602.891802.17610HepG2SLBP
TXNDC11ENSG00000153066.81024.641702695.73530-1.3956076.7348075.02640HepG2SRFBP1
TXNDC11ENSG00000153066.82064.515202646.29100-0.358206.396505.75020HepG2SRSF1
TXNDC11ENSG00000153066.81751.257002283.42260-0.382802.711001.44140HepG2SSRP1
TXNDC11ENSG00000153066.81940.610202398.97520-0.305904.640003.87170HepG2SUCLG1
TXNDC11ENSG00000153066.82668.235601741.369100.615609.439207.78910HepG2SUPT6H
TXNDC11ENSG00000153066.81394.320602378.47780-0.7705019.4519018.15830HepG2TAF15
TXNDC11ENSG00000153066.81678.193601337.409600.327402.499101.80470HepG2TARDBP
TXNDC11ENSG00000153066.81211.040701507.63630-0.316003.115502.59020HepG2TIAL1
TXNDC11ENSG00000153066.81249.872201744.82350-0.481302.917801.41430HepG2TRA2A
TXNDC11ENSG00000153066.81792.695802206.35730-0.299502.612202.00090HepG2U2AF1
TXNDC11ENSG00000153066.81075.90630770.553700.481502.711701.95950HepG2UCHL5
TXNDC11ENSG00000153066.82085.482902437.07020-0.224802.780402.18250HepG2UTP3
TXNDC11ENSG00000153066.81219.338401911.00310-0.648204.988603.59180HepG2XRCC6
TXNDC11ENSG00000153066.81989.704601600.859300.313604.233103.42970HepG2ZC3H8
TXNDC11ENSG00000153066.81443.45130868.255000.733209.332608.35710K562AQR
TXNDC11ENSG00000153066.8617.28560471.979300.387102.175501.40850K562BOP1
TXNDC11ENSG00000153066.8639.96530501.836200.350702.191401.48600K562CPSF6
TXNDC11ENSG00000153066.8692.79770452.329500.615006.027704.41890K562DDX3X
TXNDC11ENSG00000153066.81086.00130896.132200.277102.675102.03250K562DDX47
TXNDC11ENSG00000153066.8662.04630458.586400.529604.606602.78100K562DDX6
TXNDC11ENSG00000153066.8667.72250496.776500.426603.799402.36240K562EIF2S1
TXNDC11ENSG00000153066.8946.25180723.922700.386303.887703.05740K562EIF2S2
TXNDC11ENSG00000153066.8556.43580432.784800.362502.381001.64020K562EIF3G
TXNDC11ENSG00000153066.81143.73040472.547201.2751024.7755022.05000K562EIF4A3
TXNDC11ENSG00000153066.8630.60970425.530000.567405.776304.00940K562EIF4B
TXNDC11ENSG00000153066.8686.21670510.632000.426302.838601.97240K562FMR1
TXNDC11ENSG00000153066.8691.34360491.424800.492304.671403.91340K562FXR1
TXNDC11ENSG00000153066.8725.90700479.119500.599305.359104.26010K562GPKOW
TXNDC11ENSG00000153066.81242.21530964.668100.364702.946002.16730K562GRSF1
TXNDC11ENSG00000153066.8844.63350557.331100.599705.901905.06190K562HNRNPC
TXNDC11ENSG00000153066.8875.05000549.550500.671005.782104.36980K562HNRNPM
TXNDC11ENSG00000153066.8747.18100563.177300.407803.214702.30330K562MAGOH
TXNDC11ENSG00000153066.8836.34980668.625400.322802.783101.97060K562MTPAP
TXNDC11ENSG00000153066.8773.53900471.901600.712907.509105.51340K562NCBP2
TXNDC11ENSG00000153066.8572.33380425.693500.426902.535101.81680K562PRPF8
TXNDC11ENSG00000153066.81661.435901216.310200.449804.413603.38940K562PUF60
TXNDC11ENSG00000153066.8912.845301146.23510-0.328502.092701.60800K562PUS1
TXNDC11ENSG00000153066.8592.63870430.669600.460503.121701.31370K562RECQL
TXNDC11ENSG00000153066.8630.95100433.657600.540903.459302.54300K562RPS19
TXNDC11ENSG00000153066.8819.80800536.430800.611806.509405.43500K562SRSF1
TXNDC11ENSG00000153066.8638.53540412.236400.631204.708903.35510K562SUPV3L1
TXNDC11ENSG00000153066.8783.38600542.864400.529002.596201.90910K562TARDBP
TXNDC11ENSG00000153066.8724.29050523.664100.467803.938802.93830K562TIA1
TXNDC11ENSG00000153066.8575.80220436.264900.400302.363201.43030K562UCHL5
TXNDC11ENSG00000153066.81263.20180787.778900.6811013.3023011.86820K562UPF1
TXNDC11ENSG00000153066.8934.04320680.331800.457202.961501.71480K562UTP3
TXNDC11ENSG00000153066.81314.573801028.781800.353603.021601.66860K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TXNDC11 is not available on ENCORE database.





16 RBPs can affect the splicing of TXNDC11 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETXNDC11ENSG00000153066.8chr16-1178514511785938117821581178230111791980117921810.097000.003480.05681includedK562SRSF1
SETXNDC11ENSG00000153066.8chr16-1182450011824630118154321181552611827837118279350.167000.001890.03489includedK562SRSF1
SETXNDC11ENSG00000153066.8chr16-1179430711794420117919801179218111815432118155260.159000.003660.05917includedK562SRSF1
SETXNDC11ENSG00000153066.8chr16-117851451178593811782158117823011179198011792181-0.339000.000260.00687excludedK562SF3B4
SETXNDC11ENSG00000153066.8chr16-117943071179442011791980117921811181543211815526-0.398000.000170.00476excludedK562SF3B4
SETXNDC11ENSG00000153066.8chr16-118245001182463011815432118155261182783711827935-0.182000.000000.00000excludedHepG2U2AF1
SETXNDC11ENSG00000153066.8chr16-118278371182793511791980117921811182987211830089-0.233000.000330.01318excludedK562AKAP8L
SETXNDC11ENSG00000153066.8chr16-117851451178593811782158117823011179198011792181-0.166000.000870.02808excludedK562AKAP8L
SETXNDC11ENSG00000153066.8chr16-1181543211815554117943071179442011827837118279350.230000.007010.06924includedHepG2U2AF2
SETXNDC11ENSG00000153066.8chr16-118245001182463011815432118155261182783711827935-0.103000.000210.00366excludedHepG2U2AF2
SETXNDC11ENSG00000153066.8chr16-117943071179442011791980117921811182783711827855-0.138000.008080.06856excludedK562AQR
SETXNDC11ENSG00000153066.8chr16-118278371182793511824500118246301182987211830089-0.129000.000400.00798excludedK562PUS1
SETXNDC11ENSG00000153066.8chr16-117851451178593811782158117823011179198011792181-0.267000.000020.00050excludedK562PUS1
SETXNDC11ENSG00000153066.8chr16-1179430711794420117919801179218111815432118155260.097000.000250.01439includedHepG2MATR3
SETXNDC11ENSG00000153066.8chr16-117851451178593811782158117823011179198011792181-0.279000.000270.00774excludedK562U2AF1
SETXNDC11ENSG00000153066.8chr16-118245001182463011815432118155261182783711827935-0.070000.000590.02036excludedHepG2SF3A3
SETXNDC11ENSG00000153066.8chr16-117943071179442011791980117921811181543211815526-0.192000.000000.00004excludedHepG2SF3A3
SETXNDC11ENSG00000153066.8chr16-117943071179442011791980117921811181543211815526-0.299000.000000.00003excludedK562UTP18
SETXNDC11ENSG00000153066.8chr16-118245001182463011815432118155261182987211830089-0.167000.000640.01947excludedK562RBM15
SETXNDC11ENSG00000153066.8chr16-117943071179442011791980117921811181543211815526-0.172000.004190.08018excludedK562RBM15
SETXNDC11ENSG00000153066.8chr16-1181516911815291117943071179442011815432118155260.060000.003630.07315includedK562AGGF1
SETXNDC11ENSG00000153066.8chr16-118278371182793511824500118246301182987211830089-0.162000.000070.00334excludedK562AGGF1
SETXNDC11ENSG00000153066.8chr16-117851451178593811782158117823011179198011792181-0.173000.000540.01702excludedK562AGGF1
SETXNDC11ENSG00000153066.8chr16-117943071179442011791980117921811181543211815526-0.346000.000080.00534excludedK562SF3B1
SETXNDC11ENSG00000153066.8chr16-118245001182463011815432118155261182783711827935-0.097000.001600.06176excludedHepG2HNRNPU
SETXNDC11ENSG00000153066.8chr16-1179430711794420117919801179218111815432118155260.118000.001200.04464includedHepG2HNRNPC
A3SSTXNDC11ENSG00000153066.8chr16-1181543211815562118154321181552611824500118247040.136000.000700.00504longerK562AQR
MXETXNDC11ENSG00000153066.8chr16-11791980117921811181543211815526117858691178593811827837118279350.247000.005610.078681includedHepG2U2AF1
MXETXNDC11ENSG00000153066.8chr16-11824500118246301182783711827935118154321181552611829872118300890.182000.000010.000281includedHepG2U2AF1
MXETXNDC11ENSG00000153066.8chr16-1179198011792181118278371182793511782158117823011182987211830089-0.289000.000550.009742includedK562U2AF2
MXETXNDC11ENSG00000153066.8chr16-11791980117921811181543211815526117858691178593811827837118279350.221000.010120.054271includedHepG2U2AF2
MXETXNDC11ENSG00000153066.8chr16-11791980117921811181543211815526117858451178593811829872118299860.210000.008500.047241includedHepG2U2AF2
MXETXNDC11ENSG00000153066.8chr16-1181543211815526118245001182463011794307117944201182783711827935-0.109000.000000.000182includedHepG2HNRNPUL1
MXETXNDC11ENSG00000153066.8chr16-1182450011824630118278371182793511815432118155261182987211830089-0.133000.000100.003372includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TXNDC11 is not avaliable on ENCORE database.