TWSG1

General Information

Gene Name       : TWSG1
Gene ID             : ENSG00000128791.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TWSG1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TWSG1ENSG00000128791.1123.5419.1421.34ENCSR000AEF
HepG2TWSG1ENSG00000128791.116.0210.568.29ENCSR985KAT
K562TWSG1ENSG00000128791.1115.3916.8916.14ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TWSG1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TWSG1 RNA is bound by 14 proteins.  







eCLIP assay for TWSG1 is not avaliable on ENCORE database.





14 proteins are bound to TWSG1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1894015459401625+3'-UTR3.5026410.00565K562FAM120A
chr1894017429401777+3'-UTR3.063154.07498K562FAM120A
chr1894001419400212+3'-UTR4.263494.61859K562IGF2BP1
chr1894012219401292+3'-UTR3.770289.82885K562FAM120A
chr1894014949401526+3'-UTR3.106594.67068K562FAM120A
chr1894019289401978+3'-UTR3.546376.13908K562FAM120A
chr1894020759402119+3'-UTR3.576393.77257K562FAM120A
chr1894000659400100+3'-UTR4.478414.12025K562YBX3
chr1893993729399475+3'-UTR,CDS5.101936.80295K562SND1
chr1894001829400211+3'-UTR3.703084.66555K562FAM120A
chr1893993869399432+3'-UTR,CDS4.237106.73573K562PUM2
chr1894004419400542+3'-UTR3.951653.04123K562LIN28B
chr1894020299402048+3'-UTR3.707343.88742K562FAM120A
chr1894013539401411+3'-UTR5.037154.29122HepG2SUB1
chr1894023639402392+3'-UTR4.420613.95344K562PUM2
chr1894002619400330+3'-UTR6.2083011.95680K562PUM2
chr1894023229402395+3'-UTR3.866383.07287K562TIA1
chr1893348659334920+5'-UTR,intron-Proximal4.5615914.72128K562DDX3X
chr1893348449334921+5'-UTR,intron-Proximal5.4589512.51207HepG2DDX3X
chr1893372159337327+5'-UTR,CDS3.5224811.10825K562DDX3X
chr1893347699334844+5'-UTR4.9325212.43527HepG2DDX3X
chr1893347739334865+5'-UTR4.252669.77030K562DDX3X
chr1893371899337215+5'-UTR,intron-Proximal4.2448010.19864K562DDX3X
chr1893372459337354+CDS,intron-Proximal4.256986.65030K562LSM11
chr1893625919362687+intron-Distal4.322149.51639K562TARDBP
chr1893423539342445+intron-Distal5.324856.23225K562QKI
chr1893601099360204+intron-Distal,intron-Proximal3.854364.72639K562KHSRP
chr1893482029348262+intron-Distal4.651775.76685K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TWSG1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TWSG1 is not available on ENCORE database.

  • 109 RBPs can affect the levels of TWSG1.  








The Knockdown/knockout RNA-Seq assay for TWSG1 is not available on ENCORE database.





109 RBPs can affect the gene expression of TWSG1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TWSG1ENSG00000128791.7223.19880446.79110-1.001309.346607.65980HepG2ADAR
TWSG1ENSG00000128791.71437.82780665.532101.1112014.4355013.31900HepG2AKAP1
TWSG1ENSG00000128791.7913.68480649.561300.492104.126403.31900HepG2AUH
TWSG1ENSG00000128791.7214.19040440.47730-1.040207.154405.60620HepG2BCCIP
TWSG1ENSG00000128791.7150.50030388.34370-1.3676013.9684012.77190HepG2BOP1
TWSG1ENSG00000128791.7651.89840421.003400.630705.845604.77880HepG2CALR
TWSG1ENSG00000128791.7261.58300523.18260-1.000009.337107.98830HepG2CIRBP
TWSG1ENSG00000128791.7303.57140458.17770-0.593905.025903.65460HepG2YBX3
TWSG1ENSG00000128791.7481.55470295.396000.704904.097402.32720HepG2CSTF2T
TWSG1ENSG00000128791.7169.61520318.78990-0.910304.553003.70710HepG2DDX21
TWSG1ENSG00000128791.7217.46280405.25570-0.898103.550602.11270HepG2DDX27
TWSG1ENSG00000128791.7849.35080637.551100.413702.569201.96460HepG2DDX3X
TWSG1ENSG00000128791.7195.87510433.05850-1.144608.416207.14730HepG2DDX55
TWSG1ENSG00000128791.7269.98050371.85930-0.461902.421701.47280HepG2DDX5
TWSG1ENSG00000128791.7271.01510433.92590-0.679105.190903.87370HepG2DHX30
TWSG1ENSG00000128791.7212.96470376.48510-0.822006.445705.49400HepG2DKC1
TWSG1ENSG00000128791.7323.78280445.92240-0.461803.939103.18860HepG2DNAJC2
TWSG1ENSG00000128791.7311.74670581.85730-0.900307.479806.42820HepG2EIF4A3
TWSG1ENSG00000128791.7221.21500566.47310-1.3566012.2193010.82700HepG2EIF4B
TWSG1ENSG00000128791.7553.11850663.42120-0.262302.058701.31850HepG2EIF4G1
TWSG1ENSG00000128791.7624.85690455.867700.454802.298201.59360HepG2FIP1L1
TWSG1ENSG00000128791.7684.74810474.124200.530202.842301.71350HepG2FUS
TWSG1ENSG00000128791.7704.88670544.563500.372202.048301.47280HepG2G3BP1
TWSG1ENSG00000128791.7209.45440454.20850-1.116709.454908.36430HepG2HNRNPA1
TWSG1ENSG00000128791.7275.08030505.22190-0.877107.835206.71640HepG2HNRNPC
TWSG1ENSG00000128791.7278.72970382.84640-0.457902.803302.08120HepG2HNRNPF
TWSG1ENSG00000128791.7418.77600551.32910-0.396702.158201.53630HepG2HNRNPK
TWSG1ENSG00000128791.7493.81510612.67840-0.311202.756402.08390HepG2HNRNPL
TWSG1ENSG00000128791.7201.65610385.70030-0.935606.887005.94400HepG2HNRNPLL
TWSG1ENSG00000128791.7279.59270376.99930-0.431202.218301.56540HepG2IGF2BP1
TWSG1ENSG00000128791.7361.23820553.55070-0.615804.197803.38130HepG2IGF2BP2
TWSG1ENSG00000128791.7287.25750512.65580-0.8356011.5362010.15230HepG2ILF2
TWSG1ENSG00000128791.7382.67770556.75160-0.540902.779401.77440HepG2KHSRP
TWSG1ENSG00000128791.7540.68000339.952700.669302.471501.30110HepG2KRR1
TWSG1ENSG00000128791.7396.63140587.20040-0.566103.713402.95320HepG2MAGOH
TWSG1ENSG00000128791.7434.29460309.812300.487203.192201.88410HepG2NAA15
TWSG1ENSG00000128791.7403.57460604.41820-0.582703.868303.12440HepG2NCBP2
TWSG1ENSG00000128791.7544.87970666.89720-0.291502.120201.45090HepG2NOL12
TWSG1ENSG00000128791.7191.11260397.54860-1.056705.195503.67210HepG2NONO
TWSG1ENSG00000128791.7170.11300341.98660-1.007407.092005.93130HepG2NSUN2
TWSG1ENSG00000128791.7637.11690496.778400.358902.903402.03830HepG2PARN
TWSG1ENSG00000128791.7315.20260509.74650-0.693507.414806.49990HepG2PCBP1
TWSG1ENSG00000128791.7293.22910447.63860-0.610305.332004.33740HepG2PPIL4
TWSG1ENSG00000128791.7325.84860675.72350-1.0522020.0192018.72030HepG2PUM1
TWSG1ENSG00000128791.7402.82500675.25210-0.745305.227804.31980HepG2PUM2
TWSG1ENSG00000128791.7260.41680400.80610-0.622103.616502.93190HepG2PUS1
TWSG1ENSG00000128791.7251.82480561.74180-1.1575015.8290014.51270HepG2QKI
TWSG1ENSG00000128791.7910.14420623.276100.546105.128404.47700HepG2RBM22
TWSG1ENSG00000128791.7691.75230509.823000.440203.371002.63290HepG2RBM25
TWSG1ENSG00000128791.7181.67420398.41720-1.132906.707805.05580HepG2RCC2
TWSG1ENSG00000128791.7408.04780577.25000-0.500504.195703.55470HepG2NELFE
TWSG1ENSG00000128791.7211.93640412.34540-0.960207.948406.88300HepG2RPLP0
TWSG1ENSG00000128791.7206.73770290.21290-0.489302.304701.73810HepG2RPS19
TWSG1ENSG00000128791.7233.98970446.94860-0.9337011.4687010.29550HepG2SAFB2
TWSG1ENSG00000128791.7167.63060291.29660-0.797204.781403.55950HepG2SERBP1
TWSG1ENSG00000128791.7207.30590381.77550-0.881006.614805.56220HepG2SF3B1
TWSG1ENSG00000128791.7398.34260610.30900-0.615507.717406.63500HepG2SLBP
TWSG1ENSG00000128791.7393.56670521.21860-0.405303.593302.87620HepG2SMN1
TWSG1ENSG00000128791.7931.39760704.003100.403702.852902.34620HepG2SRFBP1
TWSG1ENSG00000128791.7292.67250628.48860-1.1026018.8362017.40860HepG2SRSF5
TWSG1ENSG00000128791.7365.22450458.57450-0.328402.157101.65730HepG2SRSF9
TWSG1ENSG00000128791.7245.82380611.30360-1.314307.901607.12100HepG2SSB
TWSG1ENSG00000128791.7194.38720304.49540-0.647503.305201.95820HepG2STAU1
TWSG1ENSG00000128791.7213.89740343.22310-0.682203.334601.86720HepG2SUGP2
TWSG1ENSG00000128791.7255.12350431.13800-0.757004.047203.25300HepG2SUPV3L1
TWSG1ENSG00000128791.7198.33580375.89990-0.922407.056505.97140HepG2TARDBP
TWSG1ENSG00000128791.7167.83770288.99800-0.784004.158202.96740HepG2TFIP11
TWSG1ENSG00000128791.7184.65480487.67600-1.4011020.3808019.25340HepG2TIAL1
TWSG1ENSG00000128791.7244.02300492.03110-1.0117014.3099013.16910HepG2TRIM56
TWSG1ENSG00000128791.7476.45990621.85470-0.384202.685501.82620HepG2TUFM
TWSG1ENSG00000128791.7570.31030389.969000.548303.471602.77310HepG2U2AF1
TWSG1ENSG00000128791.7324.42500585.59910-0.852002.207001.33700HepG2U2AF2
TWSG1ENSG00000128791.7495.51080658.18520-0.409602.070901.35250HepG2UBE2L3
TWSG1ENSG00000128791.7152.89970254.71030-0.736303.672102.79880HepG2UCHL5
TWSG1ENSG00000128791.7613.11160452.041000.439603.823702.61100HepG2UTP18
TWSG1ENSG00000128791.7227.94100347.58680-0.608703.075501.91310HepG2XPO5
TWSG1ENSG00000128791.7150.63940424.40700-1.4943014.3048012.67580HepG2XRN2
TWSG1ENSG00000128791.7206.27440281.47600-0.448402.482201.84050HepG2ZC3H8
TWSG1ENSG00000128791.7603.07660483.683700.318202.644202.10640HepG2ZNF622
TWSG1ENSG00000128791.7710.873501243.35710-0.8066016.7879015.51470K562AGGF1
TWSG1ENSG00000128791.71420.401201816.93910-0.355202.907901.63540K562APOBEC3C
TWSG1ENSG00000128791.71051.770901725.53510-0.7142016.5393015.06610K562DDX47
TWSG1ENSG00000128791.7664.97290939.04260-0.497902.879101.57210K562EEF2
TWSG1ENSG00000128791.7599.49860907.27200-0.597805.612604.28610K562EFTUD2
TWSG1ENSG00000128791.71168.169801443.23400-0.305103.444402.08140K562EIF2S1
TWSG1ENSG00000128791.7330.63430490.89100-0.570202.550501.58830K562EIF3A
TWSG1ENSG00000128791.7706.16740989.06020-0.486005.879304.73240K562EIF3G
TWSG1ENSG00000128791.7798.441801372.68720-0.781708.939507.46110K562EIF4A3
TWSG1ENSG00000128791.7661.404401236.20440-0.902307.839205.75320K562EIF4B
TWSG1ENSG00000128791.7634.716701198.23270-0.9167017.9636014.56070K562EWSR1
TWSG1ENSG00000128791.7753.942101058.00170-0.488804.366603.28600K562FIP1L1
TWSG1ENSG00000128791.71025.055401427.54140-0.477806.805405.91670K562FXR1
TWSG1ENSG00000128791.7857.648801534.27860-0.839104.145503.22340K562GRSF1
TWSG1ENSG00000128791.7507.978101072.98540-1.0788018.6051017.13360K562HNRNPC
TWSG1ENSG00000128791.7735.69010958.07560-0.381002.890801.72390K562HNRNPF
TWSG1ENSG00000128791.71234.150901559.42320-0.337503.005601.90070K562HNRNPL
TWSG1ENSG00000128791.71792.469101373.023600.384501.995201.30330K562KIF1C
TWSG1ENSG00000128791.71266.778001722.83850-0.443604.864103.74180K562MAGOH
TWSG1ENSG00000128791.71355.392701719.44480-0.343203.281502.26730K562MATR3
TWSG1ENSG00000128791.71939.205401538.131000.334203.282202.27770K562MBNL1
TWSG1ENSG00000128791.7857.157501094.21690-0.352304.158503.18460K562MTPAP
TWSG1ENSG00000128791.7751.993301056.30030-0.490203.658001.93450K562NUSAP1
TWSG1ENSG00000128791.7777.311401047.48860-0.430403.519501.88170K562PHF6
TWSG1ENSG00000128791.7552.91110730.48280-0.401803.077902.23200K562POLR2G
TWSG1ENSG00000128791.7665.20000882.88130-0.408402.791502.03870K562PRPF8
TWSG1ENSG00000128791.7630.89930962.01550-0.608705.399304.07860K562PSIP1
TWSG1ENSG00000128791.71105.637801673.79570-0.598207.694106.62380K562PTBP1
TWSG1ENSG00000128791.71538.951402341.41760-0.6054012.5112010.47080K562PUM2
TWSG1ENSG00000128791.71603.641701283.091600.321602.379901.86770K562PUS1
TWSG1ENSG00000128791.71061.266201490.81040-0.490306.477903.65200K562QKI
TWSG1ENSG00000128791.71586.008301250.153200.343203.764203.08830K562RBM15
TWSG1ENSG00000128791.71100.205901605.33440-0.545105.823704.54540K562RBM22
TWSG1ENSG00000128791.71186.240801689.27250-0.510005.062603.53030K562NELFE
TWSG1ENSG00000128791.7824.280301352.96290-0.714909.731806.54300K562RECQL
TWSG1ENSG00000128791.7586.19190975.64180-0.735007.292505.57000K562RPS3
TWSG1ENSG00000128791.7413.82560650.84270-0.653305.993604.39750K562SAFB
TWSG1ENSG00000128791.71087.716601385.37270-0.349003.421402.46600K562SF3B4
TWSG1ENSG00000128791.71152.314401640.80300-0.509906.409905.34500K562SRSF1
TWSG1ENSG00000128791.7600.83440941.92750-0.648607.153605.34100K562SRSF4
TWSG1ENSG00000128791.71305.661701660.76090-0.347102.665901.96950K562TARDBP
TWSG1ENSG00000128791.71239.681401601.94910-0.369903.718402.75050K562TIA1
TWSG1ENSG00000128791.71249.298501571.60680-0.331102.714501.63540K562TRA2A
TWSG1ENSG00000128791.7746.20700982.87480-0.397402.921801.94490K562TRIM56
TWSG1ENSG00000128791.7996.693801291.54090-0.373902.369901.36910K562U2AF1
TWSG1ENSG00000128791.7957.219301333.69860-0.478505.706604.55330K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TWSG1 is not available on ENCORE database.





5 RBPs can affect the splicing of TWSG1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETWSG1ENSG00000128791.7chr18+9367485936762893599699360069939627793965440.114000.000160.00735includedK562AKAP8L
SETWSG1ENSG00000128791.7chr18+9367485936762893599469360069939627793965440.155000.000000.00008includedK562PUS1
SETWSG1ENSG00000128791.7chr18+9367485936762893599699360069939627793965440.186000.000000.00015includedK562AGGF1
SETWSG1ENSG00000128791.7chr18+9340882934097993371909337350935996993600690.052000.000050.00364includedK562PTBP1
A3SSTWSG1ENSG00000128791.7chr18+9337172933735093371909337350933476493349180.088000.004620.02694longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TWSG1 is not avaliable on ENCORE database.