TRIM27

General Information

Gene Name       : TRIM27
Gene ID             : ENSG00000204713.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TRIM27)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRIM27ENSG00000204713.1033.1932.3132.75ENCSR000AEF
HepG2TRIM27ENSG00000204713.1055.2259.8657.54ENCSR985KAT
K562TRIM27ENSG00000204713.1065.6567.0566.35ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
TRIM27Ribo-STAMP-293TshRNABGRSLV05-19,BGRSLV05-20BGRSLV05-1,BGRSLV05-2NotSatisfiedENCORE2
TRIM27Ribo-STAMP-293TshRNABGRSLV07-25,BGRSLV07-26BGRSLV07-1,BGRSLV07-2NotSatisfiedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRIM27 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRIM27 RNA is bound by 38 proteins.  







eCLIP assay for TRIM27 is not avaliable on ENCORE database.





38 proteins are bound to TRIM27 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62887171128871791-3'-UTR,intron-Distal3.569534.95014HepG2DDX55
chr62887104228871080-3'-UTR,intron-Distal3.530923.77931K562UPF1
chr62887175928871841-3'-UTR,intron-Distal3.152775.39571HepG2LARP4
chr62887103828871091-3'-UTR,intron-Distal3.875773.08510HepG2ZC3H11A
chr62887091028870995-3'-UTR,intron-Distal3.7312611.83824HepG2U2AF2
chr62887122428871367-3'-UTR,intron-Distal3.403099.82186K562UPF1
chr62887176228871815-3'-UTR,intron-Distal3.625184.34553K562DDX6
chr62887176728871810-3'-UTR,intron-Distal3.739806.92152K562PABPC4
chr62887088928870946-3'-UTR,intron-Distal3.778143.76069K562U2AF1
chr62887090028870972-3'-UTR,intron-Distal4.5206920.03017K562PABPC4
chr62887169728871812-3'-UTR,intron-Distal3.949375.77456HepG2ZC3H11A
chr62887079028870846-3'-UTR,intron-Distal4.722719.97647HepG2PRPF8
chr62889150828891559-5'-UTR,intron-Distal3.807176.12687HepG2RPS3
chr62889137428891460-5'-UTR,CDS,intron-Distal3.421208.39246HepG2RPS3
chr62889136928891438-5'-UTR,CDS,intron-Distal3.9123214.36983HepG2DDX3X
chr62889162428891670-5'-UTR,intron-Distal3.233739.92691K562DDX3X
chr62889161328891714-5'-UTR,intron-Distal,intron-Proximal3.375115.34452K562PCBP1
chr62889133728891434-5'-UTR,CDS,intron-Distal4.441869.24647K562FXR2
chr62889136528891463-5'-UTR,CDS,intron-Distal3.231797.31049K562DDX3X
chr62889167028891726-5'-UTR,intron-Distal,intron-Proximal3.375677.59920K562DDX3X
chr62887223928872313-CDS,intron-Distal,intron-Proximal3.2733123.29561K562TIA1
chr62887495328875044-CDS,intron-Distal,intron-Proximal3.0434712.23501K562PRPF8
chr62887496128875088-CDS,intron-Distal,intron-Proximal3.8320813.18006K562BUD13
chr62887946728879497-CDS,intron-Distal,intron-Proximal3.448787.82075HepG2PPIG
chr62887945728879499-CDS,intron-Distal,intron-Proximal4.2322026.83015HepG2U2AF2
chr62888966828889720-CDS,intron-Distal,intron-Proximal5.242478.07480K562FMR1
chr62889102728891097-CDS,intron-Distal3.480645.16533K562FMR1
chr62887654828876621-CDS,intron-Distal,intron-Proximal3.8287218.73313K562EFTUD2
chr62887674828876798-CDS,intron-Distal,intron-Proximal3.186956.34055HepG2PPIG
chr62888779528887841-CDS,intron-Distal3.4994729.34896HepG2PRPF8
chr62888800428888021-CDS,intron-Distal,intron-Proximal3.006246.06509HepG2PPIG
chr62887225728872320-CDS,intron-Distal,intron-Proximal3.184546.56546K562RBM15
chr62887652928876588-CDS,intron-Distal,intron-Proximal4.990837.45424HepG2AQR
chr62887942928879507-CDS,intron-Distal,intron-Proximal5.7524610.43516HepG2PRPF8
chr62887654028876613-CDS,intron-Distal,intron-Proximal4.516997.56654HepG2PRPF8
chr62887653628876629-CDS,intron-Distal,intron-Proximal3.8099815.90532HepG2EFTUD2
chr62887674528876800-CDS,intron-Distal,intron-Proximal3.682277.83567HepG2BCLAF1
chr62889094528891035-CDS,intron-Distal4.6360018.78550HepG2PRPF8
chr62889126328891348-CDS,intron-Distal3.679149.41377HepG2GRWD1
chr62887944728879507-CDS,intron-Distal,intron-Proximal3.420268.62916HepG2U2AF1
chr62887238928872496-CDS,intron-Distal,intron-Proximal4.0307912.48484K562SF3B4
chr62889109928891218-CDS,intron-Distal3.6101311.67900HepG2PPIG
chr62889126428891316-CDS,intron-Distal4.747975.35746HepG2DDX3X
chr62887673128876751-CDS,intron-Distal,intron-Proximal3.280138.69914K562AQR
chr62888974828889801-CDS,intron-Distal,intron-Proximal5.814509.20554HepG2BUD13
chr62887942728879502-CDS,intron-Distal,intron-Proximal3.3650311.35893HepG2BUD13
chr62887946028879506-CDS,intron-Distal,intron-Proximal3.7682410.33044K562U2AF1
chr62888960728889670-CDS,intron-Distal,intron-Proximal4.6498612.35151K562AQR
chr62887946328879508-CDS,intron-Distal,intron-Proximal3.907399.46609K562BUD13
chr62887499928875015-CDS,intron-Distal,intron-Proximal5.6477123.89296K562AQR
chr62887654428876600-CDS,intron-Distal,intron-Proximal4.095437.80703K562SF3B4
chr62887654128876637-CDS,intron-Distal,intron-Proximal3.733017.71468K562GPKOW
chr62888800128888059-CDS,intron-Distal,intron-Proximal3.8287410.92716K562AQR
chr62887207128872127-CDS,intron-Distal4.875948.22774K562RPS3
chr62887651028876589-CDS,intron-Distal,intron-Proximal4.9185637.04116K562AQR
chr62887670228876767-CDS,intron-Distal,intron-Proximal3.2307910.36480K562PRPF8
chr62887671228876788-CDS,intron-Distal,intron-Proximal3.172234.94335K562GPKOW
chr62887943828879507-CDS,intron-Distal,intron-Proximal4.1428714.19661K562U2AF2
chr62887238528872503-CDS,intron-Distal,intron-Proximal3.9914311.43177HepG2AQR
chr62887674428876796-CDS,intron-Distal,intron-Proximal3.228485.34771K562DDX24
chr62887657328876617-CDS,intron-Distal,intron-Proximal3.274994.69671HepG2PPIG
chr62889121428891265-CDS,intron-Distal3.403294.35199K562FMR1
chr62888776928887909-CDS,intron-Distal,intron-Proximal3.4412718.34492HepG2GRWD1
chr62887494528875035-CDS,intron-Distal,intron-Proximal4.8811713.90941HepG2PRPF8
chr62889123628891264-CDS,intron-Distal4.0226713.13907K562YBX3
chr62888777328887792-CDS,intron-Distal,intron-Proximal3.189126.32386HepG2AQR
chr62887658928876634-CDS,intron-Distal,intron-Proximal4.0824013.29422K562AQR
chr62889120728891268-CDS,intron-Distal4.352798.27565K562FXR2
chr62889127628891298-CDS,intron-Distal3.233433.39477K562BUD13
chr62887494828875041-CDS,intron-Distal,intron-Proximal3.392176.48305HepG2EFTUD2
chr62887211628872313-CDS,intron-Distal,intron-Proximal3.381125.59132K562FUS
chr62887659428876617-CDS,intron-Distal,intron-Proximal3.088843.25772K562ZNF622
chr62889094828890993-CDS,intron-Distal5.459848.34710K562AQR
chr62889122128891236-CDS,intron-Distal3.1909610.68075K562YBX3
chr62887658328876621-CDS,intron-Distal,intron-Proximal3.637896.45164K562BUD13
chr62887237828872504-CDS,intron-Distal,intron-Proximal3.8753911.55490K562XRN2
chr62889109728891214-CDS,intron-Distal4.095449.73521K562FMR1
chr62887650428876596-CDS,intron-Distal,intron-Proximal4.3417729.05547K562PRPF8
chr62887679328876873-CDS,intron-Distal,intron-Proximal3.802188.49954K562BUD13
chr62887496428875071-CDS,intron-Distal,intron-Proximal4.4239424.76185K562GPKOW
chr62887670328876764-CDS,intron-Distal,intron-Proximal5.5725118.53372HepG2PRPF8
chr62887941828879509-CDS,intron-Distal,intron-Proximal3.3409911.00118K562GPKOW
chr62888800328888082-CDS,intron-Distal,intron-Proximal4.861726.38747HepG2AQR
chr62887215728872424-CDS,intron-Distal,intron-Proximal3.0718821.33587K562UCHL5
chr62887683528876869-CDS,intron-Distal,intron-Proximal3.314045.28960K562AQR
chr62887227028872317-CDS,intron-Distal,intron-Proximal4.545694.01760HepG2TIAL1
chr62888974228889769-CDS,intron-Distal,intron-Proximal4.347743.44423K562BUD13
chr62888960428889719-CDS,intron-Distal,intron-Proximal4.4340112.21138HepG2PRPF8
chr62887239228872466-CDS,intron-Distal,intron-Proximal4.3748820.22484K562AQR
chr62887944628879496-CDS,intron-Distal,intron-Proximal3.689486.25732K562DDX24
chr62889102628891104-CDS,intron-Distal3.208485.39266HepG2GRWD1
chr62887496428875028-CDS,intron-Distal,intron-Proximal4.8826917.57728K562SF3B4
chr62887945328879509-CDS,intron-Distal,intron-Proximal4.003985.90528HepG2AQR
chr62888790928888022-CDS,intron-Distal,intron-Proximal3.165287.78685HepG2GRWD1
chr62887501628875077-CDS,intron-Distal,intron-Proximal4.6874421.22383K562AQR
chr62889126828891329-CDS,intron-Distal5.140226.89655K562FXR2
chr62887495828875082-CDS,intron-Distal,intron-Proximal3.8727413.50820K562EFTUD2
chr62887497728875109-CDS,intron-Distal,intron-Proximal4.422568.92943HepG2AQR
chr62889120828891335-CDS,intron-Distal3.307513.17668K562METAP2
chr62887241328872493-CDS,intron-Distal,intron-Proximal4.8797328.35245HepG2SF3B4
chr62887233128872482-CDS,intron-Distal,intron-Proximal4.2233614.06246K562BUD13
chr62887946728879515-CDS,intron-Distal,intron-Proximal4.3841519.12434K562AQR
chr62889120628891298-CDS,intron-Distal3.009654.65089K562XRN2
chr62888774428887795-CDS,intron-Distal,intron-Proximal4.7420161.69360HepG2PRPF8
chr62887512428875176-intron-Distal,intron-Proximal4.5107313.21726HepG2QKI
chr62887492328874949-intron-Distal,intron-Proximal3.4326310.21331K562KHSRP
chr62888778528887788-intron-Distal,intron-Proximal4.9505429.27906K562AQR
chr62887488528874923-intron-Distal,intron-Proximal5.1738910.95353K562KHSRP
chr62887504028875091-intron-Distal,intron-Proximal5.9075314.04112K562SF3B4
chr62887489128874948-intron-Distal,intron-Proximal4.3665113.13450K562PRPF8
chr62888775028887773-intron-Distal,intron-Proximal4.406478.29703HepG2AQR
chr62888775228887778-intron-Distal,intron-Proximal5.9431534.07967K562AQR
chr62887504928875093-intron-Distal,intron-Proximal3.6516510.29656HepG2QKI
chr62887509328875124-intron-Distal,intron-Proximal4.7840415.60046HepG2QKI
chr62887670828876731-intron-Distal,intron-Proximal4.193598.79285K562AQR
chr62887506928875183-intron-Distal,intron-Proximal5.404759.72850K562QKI
chr62888952128889564-intron-Distal3.796644.93376K562PRPF8
chr62887949928879509-intron-Distal,intron-Proximal6.1222729.13448HepG2U2AF2
chr62887646728876479-intron-Distal4.954493.65355K562EFTUD2
chr62888771928887752-intron-Distal,intron-Proximal7.5273138.38600K562AQR
chr62887547628875540-intron-Distal3.152834.08064K562KHSRP
chr62887244228872508-intron-Distal,intron-Proximal4.1170916.59020HepG2SF3A3
chr62887518228875261-intron-Distal,intron-Proximal3.404736.67026K562KHSRP
chr62887644728876504-intron-Distal,intron-Proximal3.788117.75444K562PRPF8
chr62887511028875174-intron-Distal,intron-Proximal3.930785.00859HepG2RBFOX2
chr62887663428876710-intron-Distal,intron-Proximal3.969066.93060K562EFTUD2
chr62887495328874999-intron-Distal,intron-Proximal5.4837121.50140K562AQR
chr62887938128879445-intron-Distal,intron-Proximal3.321668.38944K562PRPF8
chr62888589428885951-intron-Distal3.103543.14580K562ILF3
chr62888688828886958-intron-Distal3.008374.83813HepG2ILF3
chr62888762528887701-intron-Distal,intron-Proximal4.8196113.01051K562PRPF8
chr62887653528876583-intron-Distal,intron-Proximal5.9866111.09437K562BUD13
chr62887941428879463-intron-Distal,intron-Proximal3.205204.68044K562BUD13
chr62887944528879465-intron-Distal,intron-Proximal3.114144.65130K562PRPF8
chr62887393428873985-intron-Distal4.017863.24242HepG2HNRNPC
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRIM27 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRIM27 is not available on ENCORE database.

  • 84 RBPs can affect the levels of TRIM27.  








The Knockdown/knockout RNA-Seq assay for TRIM27 is not available on ENCORE database.





84 RBPs can affect the gene expression of TRIM27 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRIM27ENSG00000204713.62741.857402204.311600.314701.955001.49900HepG2AKAP1
TRIM27ENSG00000204713.61666.867202143.99050-0.363203.290402.64420HepG2BOP1
TRIM27ENSG00000204713.61495.637101968.30660-0.396203.420702.66440HepG2CPSF6
TRIM27ENSG00000204713.6740.40440953.26260-0.364602.529801.49750HepG2CSTF2
TRIM27ENSG00000204713.6848.984401353.88960-0.673308.019706.92670HepG2DDX21
TRIM27ENSG00000204713.62691.182901813.749800.569205.288604.46030HepG2DDX6
TRIM27ENSG00000204713.61390.311301759.32480-0.339604.617703.78220HepG2DKC1
TRIM27ENSG00000204713.61202.093001406.29910-0.226401.939701.33950HepG2DNAJC21
TRIM27ENSG00000204713.61389.438801743.80030-0.327702.147301.61770HepG2EIF2S1
TRIM27ENSG00000204713.6980.612101278.12530-0.382303.767002.53010HepG2EIF3G
TRIM27ENSG00000204713.61293.970401927.20040-0.574705.026404.16820HepG2EIF4A3
TRIM27ENSG00000204713.62530.390201876.216700.431402.678602.00070HepG2EIF4B
TRIM27ENSG00000204713.61378.026201759.46870-0.352502.912801.79210HepG2ESF1
TRIM27ENSG00000204713.62633.866403470.64630-0.398008.337907.39110HepG2ETF1
TRIM27ENSG00000204713.61450.876901803.65920-0.314001.940001.37860HepG2G3BP1
TRIM27ENSG00000204713.61043.050201346.13780-0.368002.642401.64730HepG2GNB2L1
TRIM27ENSG00000204713.61704.960202231.24670-0.388102.854602.20440HepG2GPKOW
TRIM27ENSG00000204713.6899.790801419.77230-0.658008.523107.47960HepG2HNRNPA1
TRIM27ENSG00000204713.61120.006701579.24950-0.495705.226704.29710HepG2HNRNPC
TRIM27ENSG00000204713.61554.152301965.93400-0.339104.944604.02070HepG2HNRNPF
TRIM27ENSG00000204713.62428.934601826.011300.411503.990003.16530HepG2HNRNPK
TRIM27ENSG00000204713.61444.871102129.31820-0.559506.039005.14630HepG2HNRNPLL
TRIM27ENSG00000204713.61189.505301568.80730-0.399306.042205.17530HepG2HNRNPU
TRIM27ENSG00000204713.61638.615601935.88050-0.240502.054301.42430HepG2IGF2BP1
TRIM27ENSG00000204713.61444.915701833.43450-0.343602.441901.80290HepG2IGF2BP2
TRIM27ENSG00000204713.61293.190001659.87890-0.360103.379702.48930HepG2MSI2
TRIM27ENSG00000204713.61388.509802171.58880-0.645204.774903.48040HepG2MTPAP
TRIM27ENSG00000204713.62217.587101782.991700.314602.141201.49950HepG2PABPC4
TRIM27ENSG00000204713.61840.091701552.831500.244802.726501.88450HepG2PARN
TRIM27ENSG00000204713.62429.927301837.463300.403107.250006.34330HepG2PCBP1
TRIM27ENSG00000204713.61147.879801399.24810-0.285702.811402.06900HepG2PPIL4
TRIM27ENSG00000204713.61573.565801837.71330-0.223902.368301.64600HepG2PRPF4
TRIM27ENSG00000204713.62456.342201869.674300.393606.126805.37560HepG2PTBP1
TRIM27ENSG00000204713.61671.231002378.33810-0.509006.448405.58900HepG2PUF60
TRIM27ENSG00000204713.62782.490202524.783100.140101.867601.35970HepG2PUM1
TRIM27ENSG00000204713.62149.671802522.89400-0.231001.946901.37800HepG2PUM2
TRIM27ENSG00000204713.63452.362902900.781000.251002.990102.45720HepG2RBM22
TRIM27ENSG00000204713.62102.125601590.497500.402303.161502.09790HepG2RBM27
TRIM27ENSG00000204713.61708.872702080.77910-0.284103.620403.01820HepG2NELFE
TRIM27ENSG00000204713.61311.767502117.84080-0.6911010.459309.27870HepG2RPLP0
TRIM27ENSG00000204713.61392.261202076.05810-0.576404.365103.35900HepG2RPS3A
TRIM27ENSG00000204713.61803.065801397.083300.367906.234405.32650HepG2SAFB2
TRIM27ENSG00000204713.61917.804502280.60370-0.250003.503902.72980HepG2SLBP
TRIM27ENSG00000204713.61831.003301629.220000.168401.903001.35280HepG2SMN1
TRIM27ENSG00000204713.64097.126103276.259800.322506.468205.79020HepG2SRFBP1
TRIM27ENSG00000204713.62966.878002267.771400.387602.488701.54470HepG2SRSF3
TRIM27ENSG00000204713.62182.152102844.45470-0.382406.540205.81460HepG2SSB
TRIM27ENSG00000204713.62152.855902670.64570-0.310905.218804.41100HepG2SUCLG1
TRIM27ENSG00000204713.61051.102101510.53770-0.523204.239403.42760HepG2SUPV3L1
TRIM27ENSG00000204713.61168.705901524.33210-0.383304.179103.59200HepG2TIAL1
TRIM27ENSG00000204713.62640.139201754.449000.589507.187106.18220HepG2U2AF1
TRIM27ENSG00000204713.61900.43010960.636900.984203.184102.12420HepG2U2AF2
TRIM27ENSG00000204713.61475.00090892.310200.725008.478807.15140HepG2UCHL5
TRIM27ENSG00000204713.61975.948301657.022900.253903.162202.52940HepG2UTP3
TRIM27ENSG00000204713.61493.601301813.62090-0.280104.056703.26740HepG2ZC3H8
TRIM27ENSG00000204713.66738.488204556.336500.564508.242407.31740K562AQR
TRIM27ENSG00000204713.64193.090203080.568500.444704.727403.57550K562BOP1
TRIM27ENSG00000204713.64141.655803472.627200.254102.695301.53680K562CCDC124
TRIM27ENSG00000204713.65296.057303315.283800.675703.577102.34130K562CNOT7
TRIM27ENSG00000204713.62499.625501857.211000.428503.949302.31580K562DHX30
TRIM27ENSG00000204713.62486.307301783.924700.478805.311903.44660K562DNAJC21
TRIM27ENSG00000204713.61823.424502627.49980-0.527004.069902.48530K562EEF2
TRIM27ENSG00000204713.64266.015605223.60460-0.292204.473903.29240K562EIF4G2
TRIM27ENSG00000204713.63501.009202759.362700.343303.890802.35020K562EXOSC5
TRIM27ENSG00000204713.64362.737503332.847600.388403.858402.84210K562FMR1
TRIM27ENSG00000204713.63577.601802824.957900.340702.653901.75950K562FTO
TRIM27ENSG00000204713.62544.800202900.62070-0.188801.861501.34520K562FXR1
TRIM27ENSG00000204713.63852.184303127.179200.300702.855502.04760K562GPKOW
TRIM27ENSG00000204713.65776.701304548.738900.344704.088503.17160K562GRSF1
TRIM27ENSG00000204713.62222.022302832.99950-0.350502.368301.43920K562IGF2BP2
TRIM27ENSG00000204713.62124.264802881.66020-0.439904.963903.27580K562IGF2BP3
TRIM27ENSG00000204713.62320.053702971.66120-0.357103.948002.83140K562MATR3
TRIM27ENSG00000204713.64094.300503052.503600.423505.540304.27400K562METAP2
TRIM27ENSG00000204713.66757.247605567.897300.279202.574001.48670K562MSI2
TRIM27ENSG00000204713.64181.428703620.101200.207902.990902.15110K562MTPAP
TRIM27ENSG00000204713.65561.358004022.408700.4673020.5993018.83580K562NSUN2
TRIM27ENSG00000204713.65233.846203185.046300.716503.691202.24390K562PABPC1
TRIM27ENSG00000204713.62432.490703509.89830-0.529005.481104.30450K562PCBP3
TRIM27ENSG00000204713.61844.819602692.21250-0.545309.179207.75280K562POLR2G
TRIM27ENSG00000204713.67427.710805939.764900.322405.917704.49720K562PUM2
TRIM27ENSG00000204713.62341.504102855.85120-0.286503.266201.32040K562QKI
TRIM27ENSG00000204713.61932.263502516.34070-0.381002.745001.93280K562RPS19
TRIM27ENSG00000204713.61923.750702413.08680-0.327002.537301.58370K562RPS3
TRIM27ENSG00000204713.61377.319602113.92400-0.618104.452402.44510K562SERBP1
TRIM27ENSG00000204713.65902.805203968.865900.5726015.3475013.54210K562SF3A3
TRIM27ENSG00000204713.62384.362201827.134400.383903.537602.09070K562SLBP
TRIM27ENSG00000204713.63166.870904066.16850-0.360609.145907.55460K562SRPK2
TRIM27ENSG00000204713.66067.762204972.797500.287003.755602.01170K562SUCLG1
TRIM27ENSG00000204713.62267.431502768.72950-0.288202.812801.98750K562TIA1
TRIM27ENSG00000204713.62132.385602716.78260-0.349403.230102.03530K562TRA2A
TRIM27ENSG00000204713.63875.538604481.91390-0.209702.972001.65570K562TROVE2
TRIM27ENSG00000204713.65722.548804265.033300.4240010.766409.46520K562UPF1
TRIM27ENSG00000204713.64553.816903649.473800.319303.510402.52630K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRIM27 is not available on ENCORE database.





11 RBPs can affect the splicing of TRIM27 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETRIM27ENSG00000204713.6chr6-288749822887503928872330288724422887658428876617-0.075000.000030.00096excludedK562SF3B4
SETRIM27ENSG00000204713.6chr6-288750122887503928870778288724422887658428876617-0.081000.000000.00001excludedK562PRPF8
SETRIM27ENSG00000204713.6chr6-288750122887503928870778288724422887658428876661-0.106000.000000.00000excludedK562AQR
SETRIM27ENSG00000204713.6chr6-288750122887503928870778288724422887658428876617-0.052000.000040.00463excludedHepG2NCBP2
SETRIM27ENSG00000204713.6chr6-288765842887661728872330288724422887674928876766-0.097000.000260.01040excludedHepG2SF3A3
SETRIM27ENSG00000204713.6chr6-288750122887503928870778288724422887658428876617-0.060000.000010.00085excludedK562TARDBP
SETRIM27ENSG00000204713.6chr6-288750122887503928870778288724422887658428876617-0.051000.000060.00429excludedK562SF3B1
A3SSTRIM27ENSG00000204713.6chr6-288707782887661728870778288724422887674928876865-0.195000.001390.09194shorterHepG2SF3A3
A3SSTRIM27ENSG00000204713.6chr6-288707782887661728870778288724422887674928876865-0.317000.000000.00000shorterK562AQR
RITRIM27ENSG00000204713.6chr6-288707782887661728870778288724422887658428876617-0.249000.001850.02930excludedK562SF3B4
RITRIM27ENSG00000204713.6chr6-2887077828876617288707782887244228876584288766170.136000.015110.07997includedK562PUS1
RITRIM27ENSG00000204713.6chr6-288707782887661728870778288724422887658428876617-0.201000.004170.09988excludedK562HNRNPUL1
RITRIM27ENSG00000204713.6chr6-288707782887661728870778288724422887658428876617-0.603000.000000.00000excludedK562PRPF8
RITRIM27ENSG00000204713.6chr6-2887077828876617288707782887244228876584288766170.440000.000080.03075includedHepG2NKRF
RITRIM27ENSG00000204713.6chr6-288707782887661728870778288724422887658428876617-0.402000.000000.00000excludedK562AQR
RITRIM27ENSG00000204713.6chr6-288707782887661728870778288724422887658428876617-0.366000.000400.01906excludedK562TARDBP
MXETRIM27ENSG00000204713.6chr6-2887674928876865288794722887949528870778288724422888778828888019-0.173000.000000.000002includedK562AQR
MXETRIM27ENSG00000204713.6chr6-28876749288768652887947228879495288765842887661728887788288880190.157000.000000.000001includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TRIM27 is not avaliable on ENCORE database.