TMED7

General Information

Gene Name       : TMED7
Gene ID             : ENSG00000134970.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMED7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMED7ENSG00000134970.1316.9712.8014.88ENCSR000AEF
HepG2TMED7ENSG00000134970.1324.0054.1839.09ENCSR985KAT
K562TMED7ENSG00000134970.1318.0320.3419.19ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMED7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMED7 RNA is bound by 14 proteins.  







eCLIP assay for TMED7 is not avaliable on ENCORE database.





14 proteins are bound to TMED7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5114961444114961512-3'-UTR,5'-UTR,CDS,intron-Distal4.8970230.19477HepG2RPS3
chr5114949825114949888-3'-UTR,intron-Distal4.636975.03175K562IGF2BP1
chr5114950564114950623-3'-UTR,intron-Distal3.410623.46148HepG2TIA1
chr5114961455114961518-3'-UTR,5'-UTR,CDS,intron-Distal4.9970047.26304HepG2DDX3X
chr5114950833114950898-3'-UTR,intron-Distal3.0672810.93089K562FAM120A
chr5114949869114949925-3'-UTR,intron-Distal3.631348.45237K562FAM120A
chr5114951599114951705-3'-UTR,intron-Distal,intron-Proximal4.7971310.26194K562IGF2BP1
chr5114950828114950918-3'-UTR,intron-Distal5.308708.79416HepG2TIA1
chr5114961603114961691-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.2126440.43731HepG2DDX3X
chr5114949438114949505-3'-UTR,intron-Distal4.048424.76828K562IGF2BP1
chr5114950826114950917-3'-UTR,intron-Distal3.579973.05548HepG2TIAL1
chr5114950376114950439-3'-UTR,intron-Distal5.1808713.97136K562FAM120A
chr5114949692114949750-3'-UTR,intron-Distal4.7709715.26648K562IGF2BP1
chr5114950803114950903-3'-UTR,intron-Distal3.829608.60023K562TIA1
chr5114951038114951075-3'-UTR,intron-Distal3.161728.97171HepG2FAM120A
chr5114951743114951854-3'-UTR,intron-Distal,intron-Proximal3.760288.76917K562IGF2BP1
chr5114961518114961595-3'-UTR,5'-UTR,intron-Distal5.0367167.18258HepG2DDX3X
chr5114950558114950618-3'-UTR,intron-Distal3.4636115.15930K562TIA1
chr5114961542114961615-3'-UTR,5'-UTR,intron-Distal3.118715.83673K562SND1
chr5114950978114951074-3'-UTR,intron-Distal3.9462117.87060K562FAM120A
chr5114949312114949381-3'-UTR,intron-Distal3.292196.06881K562PUM2
chr5114951726114951811-3'-UTR,intron-Distal,intron-Proximal3.682375.19548K562IGF2BP2
chr5114949257114949303-3'-UTR,intron-Distal4.9767611.30955K562PABPC4
chr5114950686114950795-3'-UTR,intron-Distal4.3586314.11369HepG2FUBP3
chr5114950561114950625-3'-UTR,intron-Distal3.692644.98667HepG2UPF1
chr5114961631114961697-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.9618412.73259HepG2RPS3
chr5114949647114949692-3'-UTR,intron-Distal4.092868.45080K562IGF2BP1
chr5114950470114950560-3'-UTR,intron-Distal3.3641211.96465K562FAM120A
chr5114961515114961593-3'-UTR,5'-UTR,intron-Distal4.9011839.74331HepG2RPS3
chr5114950123114950191-3'-UTR,intron-Distal4.8711319.04824K562FAM120A
chr5114950191114950240-3'-UTR,intron-Distal3.584399.43165K562FAM120A
chr5114950193114950226-3'-UTR,intron-Distal4.803444.56734HepG2FAM120A
chr5114961616114961697-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.419314.35063K562GEMIN5
chr5114950539114950622-3'-UTR,intron-Distal3.9312618.98472HepG2FAM120A
chr5114951609114951667-3'-UTR,intron-Distal,intron-Proximal4.385315.09622HepG2IGF2BP1
chr5114956115114956195-CDS,intron-Distal,intron-Proximal3.716615.36986K562RBM15
chr5114961310114961324-CDS,intron-Distal3.451503.49838K562SND1
chr5114952003114952079-5'-UTR,CDS,intron-Distal,intron-Proximal3.263428.35637HepG2SND1
chr5114961299114961371-CDS,intron-Distal3.868729.20626HepG2SND1
chr5114951955114952003-CDS,intron-Distal,intron-Proximal3.987386.35450HepG2SND1
chr5114956130114956197-CDS,intron-Distal,intron-Proximal4.122566.71529K562IGF2BP1
chr5114961373114961444-CDS,intron-Distal3.9471618.09796HepG2RPS3
chr5114951909114952000-CDS,intron-Distal,intron-Proximal3.275354.25038K562SND1
chr5114961371114961455-CDS,intron-Distal4.2680148.73182HepG2DDX3X
chr5114952107114952143-CDS,intron-Distal,intron-Proximal3.498743.77917HepG2SND1
chr5114952011114952136-5'-UTR,CDS,intron-Distal,intron-Proximal4.0264911.02166K562SND1
chr5114952026114952087-CDS,intron-Distal4.362915.16052K562RBM15
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMED7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMED7 is not available on ENCORE database.

  • 104 RBPs can affect the levels of TMED7.  








The Knockdown/knockout RNA-Seq assay for TMED7 is not available on ENCORE database.





104 RBPs can affect the gene expression of TMED7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMED7ENSG00000134970.131832.059803160.76810-0.786804.667603.47200HepG2ABCF1
TMED7ENSG00000134970.132528.208102992.70120-0.243303.733403.04750HepG2ACO1
TMED7ENSG00000134970.131953.861902452.74160-0.328102.609401.64020HepG2ADAR
TMED7ENSG00000134970.132314.965903006.93410-0.377306.879105.72800HepG2AKAP8L
TMED7ENSG00000134970.133197.891304777.98070-0.579306.912005.69630HepG2ASCC1
TMED7ENSG00000134970.131694.683002679.20810-0.660806.041604.63040HepG2BCCIP
TMED7ENSG00000134970.132993.674602328.242300.362603.182102.21630HepG2BCLAF1
TMED7ENSG00000134970.133735.067602784.468200.423603.053402.24600HepG2CALR
TMED7ENSG00000134970.132619.518602992.25800-0.191902.758502.09350HepG2CKAP4
TMED7ENSG00000134970.134381.839503917.068100.161702.012801.36530HepG2DAZAP1
TMED7ENSG00000134970.131792.268502767.91510-0.6270020.4059018.64270HepG2DDX19B
TMED7ENSG00000134970.131903.678002328.94970-0.290902.504501.85660HepG2DDX21
TMED7ENSG00000134970.132779.479302278.146200.286902.728001.82220HepG2DDX24
TMED7ENSG00000134970.133549.219505531.71520-0.640208.114107.09290HepG2DDX3X
TMED7ENSG00000134970.131948.606102634.10350-0.434902.809002.03070HepG2DDX55
TMED7ENSG00000134970.132702.637804751.32710-0.8140010.706909.58250HepG2DDX6
TMED7ENSG00000134970.132478.675402863.25770-0.208102.183701.57100HepG2DKC1
TMED7ENSG00000134970.131987.216102447.89280-0.300803.433502.72120HepG2DNAJC2
TMED7ENSG00000134970.132687.215704568.09270-0.7655011.2733010.12450HepG2EIF2S1
TMED7ENSG00000134970.131786.949602198.70970-0.299202.758701.67860HepG2EIF3G
TMED7ENSG00000134970.133381.823005048.53420-0.578105.767504.84590HepG2EIF4A3
TMED7ENSG00000134970.133636.099004914.97030-0.434802.856702.15840HepG2EIF4B
TMED7ENSG00000134970.134801.960503701.496500.375402.076601.36350HepG2EIF4G2
TMED7ENSG00000134970.133789.215004804.92100-0.342604.284503.56440HepG2ETF1
TMED7ENSG00000134970.131881.227102924.58770-0.6366010.778209.16400HepG2EWSR1
TMED7ENSG00000134970.132911.287302192.637500.408903.985602.48250HepG2FKBP4
TMED7ENSG00000134970.132735.714205092.98860-0.8966015.4628013.96570HepG2FXR1
TMED7ENSG00000134970.131319.450304724.89920-1.8403050.8199048.15290HepG2G3BP1
TMED7ENSG00000134970.133865.631405015.55630-0.375703.375502.38350HepG2G3BP2
TMED7ENSG00000134970.131137.296601725.78100-0.601606.657105.26800HepG2GEMIN5
TMED7ENSG00000134970.131426.863402732.72900-0.937505.333203.78290HepG2GRSF1
TMED7ENSG00000134970.131331.849202493.52180-0.9048018.6026017.16860HepG2HNRNPA1
TMED7ENSG00000134970.134667.437503599.625600.374707.049905.67680HepG2HNRNPA2B1
TMED7ENSG00000134970.131750.456302773.52920-0.6640010.440909.16790HepG2HNRNPC
TMED7ENSG00000134970.132008.071402582.67050-0.363105.969504.96910HepG2HNRNPF
TMED7ENSG00000134970.133888.176904783.44180-0.299002.566401.89280HepG2HNRNPK
TMED7ENSG00000134970.132525.860103615.94260-0.517602.184401.61860HepG2HNRNPLL
TMED7ENSG00000134970.131873.904502755.19620-0.5561014.1503012.86910HepG2HNRNPU
TMED7ENSG00000134970.131826.601802543.19560-0.477506.917905.81870HepG2IGF2BP1
TMED7ENSG00000134970.133147.921804802.90100-0.609507.618706.55460HepG2IGF2BP2
TMED7ENSG00000134970.132430.236502814.35070-0.211703.176602.39670HepG2ILF2
TMED7ENSG00000134970.132396.967502735.83300-0.190802.668901.66490HepG2KIF1C
TMED7ENSG00000134970.133627.938905094.76320-0.489904.956904.08680HepG2MAGOH
TMED7ENSG00000134970.133447.621605123.40330-0.571505.883804.98970HepG2MATR3
TMED7ENSG00000134970.133328.002905244.19010-0.656108.103507.04610HepG2NCBP2
TMED7ENSG00000134970.132444.829603884.12650-0.667909.787908.38210HepG2NOL12
TMED7ENSG00000134970.134658.098703205.997100.538902.088801.43480HepG2NSUN2
TMED7ENSG00000134970.131628.685702697.87360-0.728104.081502.98910HepG2PABPC1
TMED7ENSG00000134970.133190.926202727.238600.226402.909902.04330HepG2PARN
TMED7ENSG00000134970.133109.056804291.96490-0.465209.821508.79220HepG2PCBP1
TMED7ENSG00000134970.131233.632401602.85160-0.377703.776702.33340HepG2PKM
TMED7ENSG00000134970.132037.194602457.42400-0.270603.139002.35850HepG2PPIL4
TMED7ENSG00000134970.133181.147904367.13210-0.4571011.5000010.53530HepG2PTBP1
TMED7ENSG00000134970.132271.596103048.29060-0.424309.918608.87440HepG2PUS1
TMED7ENSG00000134970.133704.962504729.93070-0.352405.470704.63560HepG2QKI
TMED7ENSG00000134970.132964.835204016.08080-0.437804.835904.19900HepG2RBM22
TMED7ENSG00000134970.132527.906804860.28400-0.9431043.4179041.85070HepG2NELFE
TMED7ENSG00000134970.132954.307204526.53920-0.6156020.2729018.86570HepG2RECQL
TMED7ENSG00000134970.131443.879202782.13350-0.9462019.5314018.04870HepG2RPLP0
TMED7ENSG00000134970.13968.909401885.88550-0.9608014.1156012.86720HepG2RPS19
TMED7ENSG00000134970.131906.027903014.02870-0.661102.458201.70040HepG2RPS2
TMED7ENSG00000134970.132074.954402453.65510-0.241902.118701.54190HepG2SAFB2
TMED7ENSG00000134970.133521.264904546.93230-0.368808.048507.12210HepG2SF3B4
TMED7ENSG00000134970.131943.858502861.42900-0.5578019.1427017.68440HepG2SMN1
TMED7ENSG00000134970.135663.775103982.478100.508002.372101.65050HepG2SNRNP70
TMED7ENSG00000134970.133764.673404536.11440-0.268902.958802.44630HepG2SRFBP1
TMED7ENSG00000134970.133872.396604745.93780-0.293505.162504.56800HepG2SRSF1
TMED7ENSG00000134970.133088.233303660.47730-0.245303.917903.19550HepG2SRSF5
TMED7ENSG00000134970.132052.694302537.38030-0.305804.508503.65300HepG2SRSF7
TMED7ENSG00000134970.133022.082103938.59410-0.382103.520002.95750HepG2SSB
TMED7ENSG00000134970.131858.736002576.38350-0.471002.356301.35310HepG2STIP1
TMED7ENSG00000134970.133719.656402655.587800.486003.189701.89140HepG2SUB1
TMED7ENSG00000134970.133232.907404163.15940-0.364806.998606.08830HepG2SUCLG1
TMED7ENSG00000134970.131200.276002677.38600-1.1575037.1397035.69330HepG2TIAL1
TMED7ENSG00000134970.132303.991802701.10720-0.229402.878902.30680HepG2TRIM56
TMED7ENSG00000134970.131147.627501549.24980-0.432903.190102.37650HepG2UCHL5
TMED7ENSG00000134970.131552.511302401.78210-0.629502.325001.41080HepG2UPF2
TMED7ENSG00000134970.132382.731602854.29330-0.260504.024703.32180HepG2UTP3
TMED7ENSG00000134970.131004.517902581.44990-1.3617022.4185020.44280HepG2XRN2
TMED7ENSG00000134970.134273.787603251.478000.3943011.8843010.94780HepG2ZNF622
TMED7ENSG00000134970.131267.446501835.23250-0.534005.970904.17540K562ABCF1
TMED7ENSG00000134970.133216.963402290.476700.490007.275406.41880K562AGGF1
TMED7ENSG00000134970.133518.236302383.385900.561708.526607.31690K562AKAP8L
TMED7ENSG00000134970.133184.582702500.822900.348605.426904.09670K562ATP5C1
TMED7ENSG00000134970.131714.039902090.07350-0.286203.173701.98330K562CPEB4
TMED7ENSG00000134970.13757.560401443.88390-0.930504.778003.75150K562CPSF6
TMED7ENSG00000134970.131551.712002162.48610-0.478808.992007.90050K562DDX47
TMED7ENSG00000134970.133327.497202564.436900.375706.617805.17350K562DKC1
TMED7ENSG00000134970.131190.338802114.37660-0.828905.478604.66730K562FXR1
TMED7ENSG00000134970.131143.183701724.31950-0.593005.258104.21100K562GRSF1
TMED7ENSG00000134970.13668.763401179.54630-0.8187012.2007011.02120K562HNRNPC
TMED7ENSG00000134970.13691.353901053.41210-0.607606.857504.97930K562HNRNPF
TMED7ENSG00000134970.131380.551501954.36090-0.501506.333304.67240K562HNRNPL
TMED7ENSG00000134970.133574.998102529.224500.499102.468701.69480K562KIF1C
TMED7ENSG00000134970.131677.149702382.17400-0.506303.453802.50910K562MAGOH
TMED7ENSG00000134970.131715.624402377.53690-0.470703.194802.19810K562MATR3
TMED7ENSG00000134970.133805.182002833.390300.425303.882502.77580K562MBNL1
TMED7ENSG00000134970.13859.569201345.67120-0.646602.894501.99740K562METAP2
TMED7ENSG00000134970.13482.352301403.84130-1.5412044.1588041.67760K562MTPAP
TMED7ENSG00000134970.131215.270501559.79930-0.360106.294005.23080K562NSUN2
TMED7ENSG00000134970.131106.534301983.10240-0.841703.715102.26210K562PABPC1
TMED7ENSG00000134970.13729.22320911.93930-0.322602.339101.60310K562POLR2G
TMED7ENSG00000134970.131142.253401497.39310-0.390603.363802.44410K562PPIG
TMED7ENSG00000134970.131248.239001003.765600.314402.064301.41220K562PRPF8
TMED7ENSG00000134970.131594.112702314.33510-0.537804.106103.31300K562PTBP1
TMED7ENSG00000134970.132274.669202740.86040-0.269002.495801.72220K562PUF60
TMED7ENSG00000134970.134432.392302363.371900.9071018.6542017.27540K562PUS1
TMED7ENSG00000134970.133789.150402302.992600.7183019.5109017.89870K562RBM15
TMED7ENSG00000134970.131503.466802219.87370-0.562203.424402.48390K562RBM22
TMED7ENSG00000134970.131509.385302335.89770-0.630003.926802.59580K562NELFE
TMED7ENSG00000134970.13867.411901601.68530-0.884806.571004.94760K562RPS3
TMED7ENSG00000134970.13638.29360812.56940-0.348302.409601.40280K562SAFB
TMED7ENSG00000134970.131863.171202265.75890-0.282202.786301.92790K562SF3B4
TMED7ENSG00000134970.131710.526002268.67550-0.407402.438201.76730K562SRSF1
TMED7ENSG00000134970.13986.883001546.52260-0.648104.116302.79770K562SRSF4
TMED7ENSG00000134970.131490.074202296.35880-0.624004.003203.14480K562TARDBP
TMED7ENSG00000134970.131694.750502215.01570-0.386202.170801.45310K562TIA1
TMED7ENSG00000134970.13570.000701017.22960-0.835609.388707.58940K562TIAL1
TMED7ENSG00000134970.131695.012901418.807000.256502.924701.61940K562TROVE2
TMED7ENSG00000134970.131387.724102181.34290-0.6525011.8320010.15530K562U2AF2
TMED7ENSG00000134970.131985.992001653.887800.263903.497502.69590K562UPF1
TMED7ENSG00000134970.131219.470601471.61840-0.271103.368902.44430K562WDR43
TMED7ENSG00000134970.133586.662901873.612500.936703.534001.65230K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMED7 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TMED7 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TMED7 is not avaliable on ENCORE database.