STK38

General Information

Gene Name       : STK38
Gene ID             : ENSG00000112079.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STK38)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STK38ENSG00000112079.813.9412.7113.32ENCSR000AEF
HepG2STK38ENSG00000112079.812.3419.1715.76ENCSR985KAT
K562STK38ENSG00000112079.815.5819.2917.43ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STK38 is not avaliable on ENCORE database.



Proteins bound to RNA
  • STK38 RNA is bound by 19 proteins.  







eCLIP assay for STK38 is not avaliable on ENCORE database.





19 proteins are bound to STK38 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr63646175536461842-3'-UTR,intron-Distal3.119683.51117HepG2LSM11
chr63646191136462012-3'-UTR,intron-Distal3.777933.74713K562FUS
chr63646171336461898-3'-UTR,intron-Distal3.597135.04010K562TARDBP
chr63650794336507992-5'-UTR,CDS,intron-Distal,intron-Proximal4.084514.07833HepG2U2AF1
chr63651503036515077-5'-UTR,intron-Distal4.097003.15006K562RBM15
chr63650793236507992-5'-UTR,CDS,intron-Distal,intron-Proximal3.100683.17814K562U2AF1
chr63650792736507993-5'-UTR,CDS,intron-Distal,intron-Proximal3.614654.46348K562U2AF2
chr63650794136507997-5'-UTR,CDS,intron-Distal,intron-Proximal4.8702711.70021HepG2U2AF2
chr63651509736515169-5'-UTR,intron-Distal4.136113.28989K562RBM15
chr63646563836465703-CDS,intron-Distal,intron-Proximal5.450194.90235K562SF3B4
chr63647528236475306-CDS,intron-Distal3.983403.43980K562ZNF622
chr63650784936507878-CDS,intron-Distal3.302113.36945K562ZNF622
chr63647533936475394-CDS,intron-Distal,intron-Proximal3.823895.09028HepG2U2AF2
chr63649211836492175-CDS,intron-Distal4.8861110.80414HepG2BCLAF1
chr63646555636465596-CDS,intron-Distal,intron-Proximal3.174866.09950HepG2BCLAF1
chr63646622636466274-CDS,intron-Distal,intron-Proximal3.969373.25055K562U2AF2
chr63648951536489593-CDS,intron-Distal5.0234013.83301HepG2BCLAF1
chr63648323436483316-CDS,intron-Distal,intron-Proximal5.2688310.50009K562TARDBP
chr63648951736489596-CDS,intron-Distal,intron-Proximal4.937447.83063HepG2GRWD1
chr63646614836466194-CDS,intron-Distal4.130115.36555HepG2BCLAF1
chr63648951836489595-CDS,intron-Distal,intron-Proximal3.136874.86220K562GRWD1
chr63646614936466214-CDS,intron-Distal3.705876.98305HepG2PPIG
chr63649211736492163-CDS,intron-Distal,intron-Proximal3.152446.00907HepG2PPIG
chr63648324836483312-CDS,intron-Distal,intron-Proximal3.637114.17944K562BUD13
chr63649211636492189-CDS,intron-Distal,intron-Proximal4.750246.73025HepG2GRWD1
chr63646456436464582-CDS,intron-Distal3.033783.85381HepG2BCLAF1
chr63646622036466274-CDS,intron-Distal,intron-Proximal3.105614.18806HepG2U2AF2
chr63649211636492179-CDS,intron-Distal,intron-Proximal3.5713210.74625K562ZNF622
chr63648955336489596-CDS,intron-Distal,intron-Proximal3.371067.51172HepG2PPIG
chr63646564836465702-CDS,intron-Distal,intron-Proximal4.067143.98315HepG2SF3B4
chr63648951536489595-CDS,intron-Distal,intron-Proximal3.7078313.60263K562ZNF622
chr63649218236492233-CDS,intron-Distal3.119915.44868K562ZNF622
chr63648324436483292-CDS,intron-Distal,intron-Proximal4.116373.45799HepG2U2AF2
chr63647008636470192-intron-Distal3.686735.49252K562KHDRBS1
chr63647347736473536-intron-Distal3.209846.39842HepG2QKI
chr63648536536485481-intron-Distal,intron-Proximal5.466048.72920K562PRPF8
chr63648716436487236-intron-Distal3.792883.29491K562HNRNPA1
chr63648273936482811-intron-Distal3.682273.35377HepG2QKI
chr63650825536508365-intron-Distal4.234173.98488K562TIA1
chr63651465436514771-intron-Distal3.887053.97268K562PTBP1
chr63651476636514841-intron-Distal5.6897412.34197HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STK38 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STK38 is not available on ENCORE database.

  • 94 RBPs can affect the levels of STK38.  








The Knockdown/knockout RNA-Seq assay for STK38 is not available on ENCORE database.





94 RBPs can affect the gene expression of STK38 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STK38ENSG00000112079.8894.01690639.178400.484004.035202.76460HepG2AATF
STK38ENSG00000112079.81130.51970803.387900.492707.779106.86340HepG2ACO1
STK38ENSG00000112079.81247.92120905.553400.462603.093502.53530HepG2AKAP1
STK38ENSG00000112079.81269.15760807.242800.6527012.3510010.88670HepG2AKAP8L
STK38ENSG00000112079.81591.716901124.942900.500605.328204.53150HepG2BOP1
STK38ENSG00000112079.8836.691401109.99810-0.407803.955203.05700HepG2CALR
STK38ENSG00000112079.8928.14220711.872800.382602.520601.77790HepG2CIRBP
STK38ENSG00000112079.81072.04240803.309900.416205.920505.01460HepG2CKAP4
STK38ENSG00000112079.8875.869101203.45170-0.458407.463806.33210HepG2DAZAP1
STK38ENSG00000112079.8493.42620735.85880-0.576603.019401.67520HepG2DDX27
STK38ENSG00000112079.81398.44280867.504100.688807.206806.24190HepG2DDX3X
STK38ENSG00000112079.8685.747201172.78060-0.774204.653803.39700HepG2DDX59
STK38ENSG00000112079.8496.07380745.08060-0.586803.938903.21190HepG2DDX6
STK38ENSG00000112079.8614.53770801.69820-0.383604.472503.67910HepG2DNAJC2
STK38ENSG00000112079.8910.56490649.451700.487402.944601.79640HepG2AGO1
STK38ENSG00000112079.81099.91810716.386500.618505.579504.75420HepG2EIF2S1
STK38ENSG00000112079.8352.29800569.97530-0.694105.411904.17900HepG2EIF3D
STK38ENSG00000112079.81024.71490791.750500.372002.216701.64250HepG2EIF4A3
STK38ENSG00000112079.81267.90960770.767200.718005.554604.60280HepG2EIF4B
STK38ENSG00000112079.8885.826401137.33580-0.360602.611901.81930HepG2EIF4G2
STK38ENSG00000112079.81493.206001010.567200.563104.780003.79050HepG2FIP1L1
STK38ENSG00000112079.8359.25460654.57990-0.865607.549705.60510HepG2FKBP4
STK38ENSG00000112079.8726.03540551.840000.395702.654501.88520HepG2FUBP3
STK38ENSG00000112079.81064.20930798.663900.414002.930102.21670HepG2FXR1
STK38ENSG00000112079.81105.26580740.972100.576804.857803.98720HepG2G3BP1
STK38ENSG00000112079.8473.01230728.72150-0.623504.822003.47450HepG2GNB2L1
STK38ENSG00000112079.81590.551001170.746300.442003.345402.64590HepG2GPKOW
STK38ENSG00000112079.81306.171401106.005600.239902.230001.38140HepG2HNRNPA2B1
STK38ENSG00000112079.8574.28430809.62730-0.495502.986201.53030HepG2HNRNPAB
STK38ENSG00000112079.8674.284801096.25300-0.7012014.6629013.22050HepG2HNRNPL
STK38ENSG00000112079.8811.609401117.26260-0.461103.595102.88770HepG2HNRNPLL
STK38ENSG00000112079.81011.67220697.297200.536805.735504.42580HepG2HNRNPM
STK38ENSG00000112079.8775.373601022.01050-0.398403.789702.95320HepG2IGF2BP1
STK38ENSG00000112079.81277.91740753.215500.762608.783707.65460HepG2IGF2BP2
STK38ENSG00000112079.8709.76990990.19990-0.480402.658901.44030HepG2KRR1
STK38ENSG00000112079.8554.65000749.64860-0.434602.889401.64600HepG2LIN28B
STK38ENSG00000112079.81559.64540803.442600.9569012.0081010.75820HepG2MATR3
STK38ENSG00000112079.8736.76430990.64970-0.427203.236402.42970HepG2NSUN2
STK38ENSG00000112079.81056.65900732.502400.528504.312103.42360HepG2PABPC4
STK38ENSG00000112079.8946.36970749.002300.337303.434002.77370HepG2PCBP1
STK38ENSG00000112079.8573.14030804.83780-0.489805.343004.34790HepG2PPIL4
STK38ENSG00000112079.8802.35520606.763500.403002.692101.89400HepG2PRPF8
STK38ENSG00000112079.8944.644301139.14690-0.270101.837101.33800HepG2PUF60
STK38ENSG00000112079.81451.406701209.254000.263203.424702.77950HepG2PUM1
STK38ENSG00000112079.8712.334001208.37120-0.7624012.2263010.87580HepG2PUM2
STK38ENSG00000112079.8615.94920825.39340-0.422303.680802.97600HepG2QKI
STK38ENSG00000112079.8432.23210829.23330-0.940005.932104.92660HepG2RAVER1
STK38ENSG00000112079.81652.633101007.004000.7146014.3040013.31280HepG2RBM22
STK38ENSG00000112079.8662.91270860.78300-0.376802.203801.32770HepG2RBM27
STK38ENSG00000112079.8426.64790698.99260-0.712205.570604.05690HepG2RCC2
STK38ENSG00000112079.81126.21010848.191900.408904.827404.14830HepG2NELFE
STK38ENSG00000112079.81045.89730790.005300.404704.721503.94520HepG2RECQL
STK38ENSG00000112079.8842.24470554.647400.602606.125105.25150HepG2RPS19
STK38ENSG00000112079.8839.49880600.227300.483903.316302.46500HepG2RRP9
STK38ENSG00000112079.8614.42570901.97330-0.553803.106201.48980HepG2RTF1
STK38ENSG00000112079.8633.26020803.60670-0.343703.403702.70230HepG2SAFB2
STK38ENSG00000112079.8731.08760556.617600.393302.507701.61050HepG2SERBP1
STK38ENSG00000112079.81463.352101076.534400.442802.564201.91470HepG2SF3A3
STK38ENSG00000112079.81080.61450793.469000.445505.614104.82210HepG2SF3B4
STK38ENSG00000112079.8826.697301092.26280-0.401905.430704.50350HepG2SLBP
STK38ENSG00000112079.8886.427901230.48390-0.473202.459601.72350HepG2SNRNP70
STK38ENSG00000112079.82101.448601137.372100.8856030.2780029.08250HepG2SRFBP1
STK38ENSG00000112079.81238.19290828.224300.580009.758608.99320HepG2SRSF1
STK38ENSG00000112079.8862.458901019.67400-0.241602.096501.48080HepG2SRSF7
STK38ENSG00000112079.81064.38920673.817100.6595012.3212011.30330HepG2SRSF9
STK38ENSG00000112079.81215.56790987.505100.299703.306702.75740HepG2SSB
STK38ENSG00000112079.81155.51030782.875100.561604.681403.83690HepG2SUPV3L1
STK38ENSG00000112079.8800.506401088.92190-0.443903.609702.79520HepG2TARDBP
STK38ENSG00000112079.8863.89390684.033500.336702.667201.84490HepG2TIA1
STK38ENSG00000112079.81178.41380876.905700.426304.523903.91720HepG2TIAL1
STK38ENSG00000112079.81145.56990864.519100.406003.105902.44210HepG2U2AF1
STK38ENSG00000112079.8707.276801177.98330-0.736006.988405.62820HepG2UBE2L3
STK38ENSG00000112079.81355.61350954.720200.505708.810507.68350HepG2UPF1
STK38ENSG00000112079.81079.56460716.971800.590404.138002.89910HepG2UPF2
STK38ENSG00000112079.81184.51200921.746800.361804.157603.44700HepG2UTP3
STK38ENSG00000112079.81310.66960711.639100.8810021.1008019.56490HepG2ZC3H8
STK38ENSG00000112079.81302.720901050.011300.311004.244703.60600HepG2ZNF622
STK38ENSG00000112079.81020.719001382.62990-0.437806.416005.60350K562AGGF1
STK38ENSG00000112079.81041.478201438.66490-0.466104.778903.91300K562AKAP8L
STK38ENSG00000112079.81680.405501229.936200.450104.063403.00370K562BOP1
STK38ENSG00000112079.81958.745702451.61800-0.323803.271202.21150K562CELF1
STK38ENSG00000112079.8602.11210801.13730-0.412004.374602.69560K562DDX27
STK38ENSG00000112079.8453.75160692.19200-0.609306.638104.45130K562EWSR1
STK38ENSG00000112079.81074.036101466.14860-0.449003.774902.77480K562FIP1L1
STK38ENSG00000112079.81681.396701330.641100.337402.549301.72840K562FMR1
STK38ENSG00000112079.8990.24620824.694300.263802.007901.47610K562FXR1
STK38ENSG00000112079.8892.925701205.64770-0.433205.117303.59280K562GLRX3
STK38ENSG00000112079.81308.146601669.83680-0.352203.098502.30100K562GRSF1
STK38ENSG00000112079.8770.635401005.96500-0.384503.384102.19270K562HNRNPA1
STK38ENSG00000112079.8722.807801113.99010-0.624109.249907.62820K562HNRNPU
STK38ENSG00000112079.8789.707801037.04200-0.393102.277801.37170K562IGF2BP2
STK38ENSG00000112079.8839.571001054.87900-0.329402.445801.34540K562IGF2BP3
STK38ENSG00000112079.81068.693601267.58400-0.246202.404301.64980K562MTPAP
STK38ENSG00000112079.81229.986201408.38500-0.195402.108101.44670K562NSUN2
STK38ENSG00000112079.8848.322501065.44820-0.328802.716101.37910K562PCBP1
STK38ENSG00000112079.81288.222401664.24900-0.369502.981002.12460K562PPIG
STK38ENSG00000112079.8643.836101059.04490-0.7180010.221309.00100K562PTBP1
STK38ENSG00000112079.82899.984002314.003000.325604.181802.85090K562PUM1
STK38ENSG00000112079.81172.856401426.93420-0.282902.157301.66580K562PUS1
STK38ENSG00000112079.81064.405301390.18870-0.385204.438403.70580K562RBM15
STK38ENSG00000112079.8560.91760801.47490-0.514903.128501.71000K562RBM25
STK38ENSG00000112079.8488.47930736.60230-0.592605.688204.25970K562RCC2
STK38ENSG00000112079.8983.58210778.815900.336702.045101.34830K562RPS19
STK38ENSG00000112079.8671.56400878.52760-0.387602.362001.57430K562SF3B4
STK38ENSG00000112079.81342.716201038.198600.371003.521602.73110K562SRSF1
STK38ENSG00000112079.8734.43980980.45440-0.416803.305702.13920K562SRSF5
STK38ENSG00000112079.81191.41970916.753700.378003.706302.75630K562SYNCRIP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STK38 is not available on ENCORE database.





11 RBPs can affect the splicing of STK38 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESTK38ENSG00000112079.8chr6-3646764936467767364661393646626336474359364744210.184000.000160.03062includedK562MATR3
SESTK38ENSG00000112079.8chr6-364661393646626336465556364656523647435936474421-0.102000.002720.06692excludedK562AKAP8L
SESTK38ENSG00000112079.8chr6-364854933648561736483114364832693648951036489594-0.051000.002160.05636excludedK562AKAP8L
SESTK38ENSG00000112079.8chr6-3646764936467767364661393646626336474359364744210.136000.000040.02162includedK562PUM1
SESTK38ENSG00000112079.8chr6-364661393646626336465556364656523647435936474421-0.151000.000100.00240excludedK562PUS1
SESTK38ENSG00000112079.8chr6-364854933648561736483114364832693648951036489594-0.064000.000900.01564excludedK562PUS1
SESTK38ENSG00000112079.8chr6-364661393646626336465556364656523647435936474421-0.149000.000220.01067excludedK562UTP18
SESTK38ENSG00000112079.8chr6-364854933648561736483114364832693648951036489594-0.101000.000010.00054excludedK562UTP18
SESTK38ENSG00000112079.8chr6-364854933648561736483114364832693648951036489594-0.105000.000000.00028excludedK562RBM15
SESTK38ENSG00000112079.8chr6-364661393646626336465556364656523647435936474421-0.096000.004380.08382excludedK562AGGF1
SESTK38ENSG00000112079.8chr6-364854933648561736483114364832693648951036489594-0.096000.000040.00207excludedK562AGGF1
A3SSSTK38ENSG00000112079.8chr6-364676493646782836467649364677673647435936474421-0.203000.000280.03854shorterK562FXR1
A3SSSTK38ENSG00000112079.8chr6-3646764936467828364676493646776736474359364744210.423000.000000.00006longerHepG2TAF15
A3SSSTK38ENSG00000112079.8chr6-3646555636465669364655563646565236466139364662880.088000.000250.00201longerK562AQR
MXESTK38ENSG00000112079.8chr6-36466139364662633646764936467767364655563646565236474359364744210.212000.000010.000151includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for STK38 is not avaliable on ENCORE database.