SMG1P1

General Information

Gene Name       : SMG1P1
Gene ID             : ENSG00000237296.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SMG1P1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SMG1P1ENSG00000237296.922.9125.4224.16ENCSR000AEF
HepG2SMG1P1ENSG00000237296.924.3629.0026.68ENCSR985KAT
K562SMG1P1ENSG00000237296.920.9021.6021.25ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SMG1P1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SMG1P1 RNA is bound by 8 proteins.  







eCLIP assay for SMG1P1 is not avaliable on ENCORE database.





8 proteins are bound to SMG1P1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr162248775922487813+intron-Distal3.213658.06124HepG2HNRNPC
chr162246024522460295+intron-Distal3.3084410.93877HepG2ILF3
chr162247854522478610+intron-Proximal4.025697.34123K562DDX24
chr162248034222480400+intron-Proximal3.0405616.94332HepG2EIF3H
chr162249224022492311+intron-Proximal4.064383.49003K562PRPF8
chr162248034122480386+intron-Proximal3.072813.16951HepG2SRSF9
chr162247856822478610+intron-Proximal3.240004.83522HepG2ZNF800
chr162248034222480390+intron-Proximal3.139487.44737K562DDX24
chr162247858722478610+intron-Proximal3.5070030.85223HepG2BCLAF1
chr162248033822480394+intron-Proximal3.051544.82195HepG2ZNF800
chr162248034222480346+intron-Proximal3.6833931.02994HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SMG1P1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SMG1P1 is not available on ENCORE database.

  • 100 RBPs can affect the levels of SMG1P1.  








The Knockdown/knockout RNA-Seq assay for SMG1P1 is not available on ENCORE database.





100 RBPs can affect the gene expression of SMG1P1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SMG1P1ENSG00000237296.5664.231101235.36850-0.895204.311902.19270HepG2APOBEC3C
SMG1P1ENSG00000237296.5362.87110704.07550-0.956308.492606.80780HepG2BCCIP
SMG1P1ENSG00000237296.5685.005101322.94180-0.949607.709906.44550HepG2CNOT7
SMG1P1ENSG00000237296.5705.73020520.035300.440402.709002.02830HepG2CPSF6
SMG1P1ENSG00000237296.5820.54390617.900800.409102.860901.73690HepG2CPSF7
SMG1P1ENSG00000237296.51057.16840814.540200.376001.886601.33710HepG2CELF1
SMG1P1ENSG00000237296.5525.62730919.53280-0.806908.143106.31010HepG2DDX1
SMG1P1ENSG00000237296.5605.63290901.68150-0.574204.876703.96700HepG2DNAJC21
SMG1P1ENSG00000237296.5472.51940893.59070-0.9192014.3105012.94110HepG2DNAJC2
SMG1P1ENSG00000237296.51097.79800478.512301.1979017.6725016.26470HepG2EIF2S1
SMG1P1ENSG00000237296.51195.33460528.873501.1763016.1024014.57350HepG2EIF4A3
SMG1P1ENSG00000237296.51738.03480514.815901.755207.688406.57180HepG2EIF4B
SMG1P1ENSG00000237296.5751.43390363.727901.0467014.1189012.40290HepG2FUBP3
SMG1P1ENSG00000237296.5730.85890494.928300.562304.060103.26240HepG2G3BP1
SMG1P1ENSG00000237296.5860.102601224.55310-0.509702.988001.83040HepG2GRSF1
SMG1P1ENSG00000237296.5677.69250910.31840-0.425703.242702.55030HepG2HNRNPA1
SMG1P1ENSG00000237296.5767.721201012.51820-0.399303.081402.35470HepG2HNRNPC
SMG1P1ENSG00000237296.5963.57590500.932600.9437012.2181010.85280HepG2HNRNPK
SMG1P1ENSG00000237296.5544.87170798.23050-0.550902.369501.73960HepG2HNRNPL
SMG1P1ENSG00000237296.5444.963901005.82720-1.1766017.3639015.94750HepG2HNRNPU
SMG1P1ENSG00000237296.5978.63250503.118400.959806.358305.37310HepG2IGF2BP2
SMG1P1ENSG00000237296.51163.55580472.015501.301506.915105.40110HepG2IGF2BP3
SMG1P1ENSG00000237296.5555.171501027.42650-0.888009.307408.04280HepG2ILF2
SMG1P1ENSG00000237296.5845.153101289.62100-0.609704.003302.38200HepG2ILF3
SMG1P1ENSG00000237296.5962.32540505.986400.927304.504403.19560HepG2KHSRP
SMG1P1ENSG00000237296.51054.112301473.97780-0.483703.003101.70310HepG2KRR1
SMG1P1ENSG00000237296.51139.41120533.611601.094304.364903.54380HepG2MAGOH
SMG1P1ENSG00000237296.51132.16610536.628201.077003.890003.15300HepG2MATR3
SMG1P1ENSG00000237296.5758.54990613.198500.306802.096601.38800HepG2MSI2
SMG1P1ENSG00000237296.5692.78850514.860400.428103.060701.78410HepG2NAA15
SMG1P1ENSG00000237296.51073.26560549.293300.9663011.5476010.29610HepG2NCBP2
SMG1P1ENSG00000237296.5828.68120489.293900.760002.284101.62330HepG2PABPC4
SMG1P1ENSG00000237296.5565.32830995.65020-0.816608.259806.92210HepG2PARN
SMG1P1ENSG00000237296.5459.03110897.12500-0.9667011.110809.69020HepG2PPIL4
SMG1P1ENSG00000237296.51302.59420880.168000.565404.030303.34360HepG2PUM1
SMG1P1ENSG00000237296.51636.80280879.594200.895905.297704.38390HepG2PUM2
SMG1P1ENSG00000237296.51362.58630947.063100.524702.485401.81580HepG2RAVER1
SMG1P1ENSG00000237296.5888.163501121.62960-0.336702.576901.74750HepG2RBM15
SMG1P1ENSG00000237296.51041.00550485.409901.100605.723004.78470HepG2RBM25
SMG1P1ENSG00000237296.5530.747501119.60950-1.076903.565201.68500HepG2RBM39
SMG1P1ENSG00000237296.51049.58080549.568500.933306.825506.04170HepG2NELFE
SMG1P1ENSG00000237296.51007.19370511.725800.976802.716602.10510HepG2RECQL
SMG1P1ENSG00000237296.5908.474301327.88830-0.547603.728502.80060HepG2RPS3A
SMG1P1ENSG00000237296.5526.87250895.75880-0.765703.518702.80820HepG2SAFB2
SMG1P1ENSG00000237296.5747.110501261.75450-0.756005.201203.14650HepG2SBDS
SMG1P1ENSG00000237296.51292.07970514.207601.3292012.9675011.83590HepG2SF3B4
SMG1P1ENSG00000237296.51116.44330794.887400.490002.655301.96550HepG2SLBP
SMG1P1ENSG00000237296.5694.444601044.64860-0.589104.173203.41190HepG2SMN1
SMG1P1ENSG00000237296.5576.375501099.07850-0.931203.027601.64130HepG2SNRNP200
SMG1P1ENSG00000237296.51594.736301337.714900.253402.122001.66490HepG2SRFBP1
SMG1P1ENSG00000237296.51233.99850818.624400.592004.244903.49870HepG2SRSF5
SMG1P1ENSG00000237296.51039.64830436.551801.2518010.205609.26240HepG2SRSF9
SMG1P1ENSG00000237296.51565.278601161.446600.430407.093406.34550HepG2SSB
SMG1P1ENSG00000237296.5802.084201154.93000-0.526003.617902.34400HepG2STIP1
SMG1P1ENSG00000237296.51306.38900884.979500.561803.046601.78160HepG2SUB1
SMG1P1ENSG00000237296.51049.32500482.207501.1216011.2468010.23690HepG2TAF15
SMG1P1ENSG00000237296.5865.93440443.258200.966009.361907.84050HepG2TIA1
SMG1P1ENSG00000237296.5529.51960986.07550-0.897005.408004.67060HepG2TRIM56
SMG1P1ENSG00000237296.51367.52040809.954700.755508.902407.17440HepG2TUFM
SMG1P1ENSG00000237296.51135.32260648.035700.8089010.153808.93400HepG2U2AF1
SMG1P1ENSG00000237296.51454.35360857.204800.762602.969902.10470HepG2UBE2L3
SMG1P1ENSG00000237296.5252.75760630.87440-1.3196012.088709.92580HepG2UPF2
SMG1P1ENSG00000237296.5507.605201189.36250-1.2284014.4708012.04010HepG2XPO5
SMG1P1ENSG00000237296.5330.30950678.35280-1.0382011.8089010.33530HepG2XRN2
SMG1P1ENSG00000237296.5562.06110879.15810-0.645406.825805.99230K562AGGF1
SMG1P1ENSG00000237296.5687.77100966.01100-0.490104.582103.24350K562AKAP8
SMG1P1ENSG00000237296.5522.09730959.81270-0.8784015.6622013.29440K562ATP5C1
SMG1P1ENSG00000237296.5207.08630333.41760-0.687102.538801.53770K562CCAR1
SMG1P1ENSG00000237296.5630.482401050.68270-0.7368010.837508.50510K562CCDC124
SMG1P1ENSG00000237296.5620.23960986.65470-0.669705.283603.20700K562CKAP4
SMG1P1ENSG00000237296.5745.17390967.42780-0.376603.424602.18750K562CPEB4
SMG1P1ENSG00000237296.5291.51600452.15640-0.633204.923503.88390K562CPSF6
SMG1P1ENSG00000237296.5412.98060537.60510-0.380502.527901.53230K562DDX3X
SMG1P1ENSG00000237296.5504.52010984.45940-0.9644018.9678016.31840K562DKC1
SMG1P1ENSG00000237296.5851.69660561.648400.600603.810802.85180K562EIF4A3
SMG1P1ENSG00000237296.5443.82060649.94380-0.550305.038903.28050K562EXOSC5
SMG1P1ENSG00000237296.5472.00930732.50420-0.634003.357402.41600K562FIP1L1
SMG1P1ENSG00000237296.5765.82010584.087900.390703.421702.75870K562FXR1
SMG1P1ENSG00000237296.5625.70510973.95490-0.638404.030803.12140K562GRSF1
SMG1P1ENSG00000237296.5326.12120602.57600-0.885704.993403.69820K562HNRNPM
SMG1P1ENSG00000237296.5479.46900993.00680-1.050406.597705.38210K562HSPD1
SMG1P1ENSG00000237296.5425.42080970.86600-1.1904014.0918011.74930K562KIF1C
SMG1P1ENSG00000237296.5493.85350929.32210-0.9121013.1091010.23050K562MAK16
SMG1P1ENSG00000237296.5438.005601087.60910-1.3121028.8341025.60760K562MBNL1
SMG1P1ENSG00000237296.5951.61880759.961500.324403.155202.29260K562MTPAP
SMG1P1ENSG00000237296.5306.10460592.42120-0.952604.644902.59360K562NUSAP1
SMG1P1ENSG00000237296.5662.774601066.79890-0.686703.403402.01610K562PABPC1
SMG1P1ENSG00000237296.51298.94320694.958900.902207.894606.21470K562PCBP2
SMG1P1ENSG00000237296.5243.47170587.26660-1.270308.187005.69920K562PHF6
SMG1P1ENSG00000237296.5395.79190634.14930-0.680107.173505.89800K562POLR2G
SMG1P1ENSG00000237296.5372.11780831.65370-1.160206.498305.14630K562PPIG
SMG1P1ENSG00000237296.5228.84740539.22620-1.236505.820904.43370K562PSIP1
SMG1P1ENSG00000237296.51124.68230758.729100.567802.543001.90230K562PTBP1
SMG1P1ENSG00000237296.51210.830201706.67950-0.495202.402001.50590K562PUM2
SMG1P1ENSG00000237296.5631.82670883.96420-0.484502.684902.09930K562RBM15
SMG1P1ENSG00000237296.51254.40170727.788400.7853011.022409.17900K562RBM22
SMG1P1ENSG00000237296.51255.10860709.257500.8233010.553607.67200K562RBM34
SMG1P1ENSG00000237296.5293.59240492.27500-0.745602.468301.53650K562RCC2
SMG1P1ENSG00000237296.5456.21810743.75450-0.705103.969503.12880K562SRSF1
SMG1P1ENSG00000237296.5329.95210539.41420-0.709102.591501.57930K562SRSF4
SMG1P1ENSG00000237296.5525.34390702.28890-0.418802.249601.32190K562SRSF5
SMG1P1ENSG00000237296.5482.09930726.17130-0.591003.841002.85420K562TIA1
SMG1P1ENSG00000237296.5331.71710601.04180-0.857507.655704.83470K562TRNAU1AP
SMG1P1ENSG00000237296.5629.42290895.34580-0.508406.557205.50570K562UPF1
SMG1P1ENSG00000237296.5575.49740919.82870-0.676603.666302.11170K562UTP18
SMG1P1ENSG00000237296.5531.87680766.12250-0.526505.012803.81920K562WDR3
SMG1P1ENSG00000237296.5385.70440676.36640-0.810309.544806.39580K562ZNF800
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SMG1P1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SMG1P1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SMG1P1 is not avaliable on ENCORE database.