SLC27A5

General Information

Gene Name       : SLC27A5
Gene ID             : ENSG00000083807.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC27A5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC27A5ENSG00000083807.93.6114.419.01ENCSR000AEF
HepG2SLC27A5ENSG00000083807.932.3711.4821.92ENCSR985KAT
K562SLC27A5ENSG00000083807.961.7338.2549.99ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC27A5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC27A5 RNA is bound by 20 proteins.  







eCLIP assay for SLC27A5 is not avaliable on ENCORE database.





20 proteins are bound to SLC27A5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195899200158992147-3'-UTR,intron-Distal3.730903.34184HepG2GRWD1
chr195899204558992135-3'-UTR,intron-Distal3.020983.46298HepG2SRSF1
chr195899155958991596-3'-UTR,intron-Distal3.344153.69530HepG2CSTF2T
chr195899116758991282-3'-UTR,intron-Distal4.780925.23978HepG2PRPF4
chr195899119458991245-3'-UTR,intron-Distal3.694064.71513K562NONO
chr195899106758991146-3'-UTR,intron-Distal4.2146313.92619HepG2CSTF2T
chr195899116658991266-3'-UTR,intron-Distal5.5433912.20972K562RBFOX2
chr195899106258991110-3'-UTR,intron-Distal3.000043.05128K562NONO
chr195899117358991309-3'-UTR,intron-Distal5.8804457.94980HepG2RBFOX2
chr195899120058991256-3'-UTR,intron-Distal3.403633.04054K562GTF2F1
chr195899117858991254-3'-UTR,intron-Distal4.313153.58513HepG2GTF2F1
chr195899162758991687-3'-UTR,intron-Distal4.510954.48497K562NONO
chr195899107358991144-3'-UTR,intron-Distal3.405217.85761K562SLTM
chr195899106758991124-3'-UTR,intron-Distal3.359903.30889K562GTF2F1
chr195899107458991155-3'-UTR,intron-Distal5.1556621.78362HepG2RBFOX2
chr195899104158991143-3'-UTR,intron-Distal5.225019.95364K562RBFOX2
chr195899117458991261-3'-UTR,intron-Distal4.346533.96304K562CSTF2T
chr195899089058990986-3'-UTR,intron-Distal4.297419.13964K562NONO
chr195899137458991429-3'-UTR,intron-Distal3.989876.09581K562SLTM
chr195899159658991734-3'-UTR,intron-Distal3.6011212.63603HepG2CSTF2T
chr195899161858991683-3'-UTR,intron-Distal4.3175312.89366HepG2RBFOX2
chr195899136058991463-3'-UTR,intron-Distal5.179977.10563K562NONO
chr195899146558991548-3'-UTR,intron-Distal3.712636.28777HepG2CSTF2T
chr195899162358991691-3'-UTR,intron-Distal4.512165.39781HepG2NKRF
chr195899135858991465-3'-UTR,intron-Distal3.638049.07843HepG2CSTF2T
chr195899117158991263-3'-UTR,intron-Distal3.542179.16853K562SLTM
chr195899136358991424-3'-UTR,intron-Distal5.8820113.60698HepG2RBFOX2
chr195899149258991560-3'-UTR,intron-Distal3.652154.48585K562NONO
chr195899118358991248-3'-UTR,intron-Distal3.576597.56410HepG2CSTF2T
chr195899150358991529-3'-UTR,intron-Distal3.564354.25955HepG2RBFOX2
chr195899089458990943-3'-UTR,intron-Distal4.240146.86279K562SLTM
chr195900974759009815-3'-UTR,intron-Distal,intron-Proximal3.882429.54328K562YBX3
chr195899103058991122-3'-UTR,intron-Distal3.587786.14554K562DROSHA
chr195899168358991719-3'-UTR,intron-Distal3.399286.64595HepG2RBFOX2
chr195899117858991258-3'-UTR,intron-Distal3.203123.20905HepG2DROSHA
chr195899161958991718-3'-UTR,intron-Distal4.015248.39538K562SLTM
chr195899117458991272-3'-UTR,intron-Distal3.915357.47109HepG2FAM120A
chr195901016659010273-5'-UTR,CDS,intron-Distal3.384744.10134HepG2LARP4
chr195901049159010581-5'-UTR,CDS,intron-Distal,intron-Proximal3.329383.40404HepG2NCBP2
chr195900134959001437-intron-Distal4.448324.58544K562ILF3
chr195901035659010466-intron-Distal,intron-Proximal4.530784.98857K562TIA1
chr195901341459013491-intron-Distal4.849064.82195HepG2XPO5
chr195899219858992273-intron-Distal5.069205.40008K562SF3B4
chr195901338059013534-intron-Distal4.992045.91895HepG2AGGF1
chr195901342559013546-intron-Distal5.511879.72485HepG2HNRNPL
chr195900321759003329-intron-Distal4.259064.07991K562ILF3
chr195900256959002652-intron-Distal3.511084.09735K562ILF3
chr195900340659003456-intron-Distal3.723703.07008K562NONO
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC27A5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC27A5 is not available on ENCORE database.

  • 83 RBPs can affect the levels of SLC27A5.  








The Knockdown/knockout RNA-Seq assay for SLC27A5 is not available on ENCORE database.





83 RBPs can affect the gene expression of SLC27A5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC27A5ENSG00000083807.564.31920160.06650-1.315408.475007.52900HepG2ACO1
SLC27A5ENSG00000083807.5120.31760343.07240-1.5117012.1591011.12220HepG2AKAP1
SLC27A5ENSG00000083807.5412.53420283.854300.539302.913902.10960HepG2ASCC1
SLC27A5ENSG00000083807.5175.36550266.98930-0.606403.722202.94730HepG2AUH
SLC27A5ENSG00000083807.5183.07120269.68410-0.558902.412001.68490HepG2CIRBP
SLC27A5ENSG00000083807.5158.5994080.438000.979304.053203.23540HepG2CPSF6
SLC27A5ENSG00000083807.593.69440159.07090-0.763601.848101.30250HepG2CELF1
SLC27A5ENSG00000083807.5258.40910170.948200.596003.788802.94470HepG2DAZAP1
SLC27A5ENSG00000083807.5200.13550328.61740-0.715403.934303.19950HepG2DDX3X
SLC27A5ENSG00000083807.5154.18720282.33620-0.872704.661103.87770HepG2DDX6
SLC27A5ENSG00000083807.5138.8724079.976700.796003.303002.53930HepG2DNAJC21
SLC27A5ENSG00000083807.5123.8137079.259600.643402.412501.79670HepG2DNAJC2
SLC27A5ENSG00000083807.5132.47540292.01160-1.140306.429305.41280HepG2EIF4B
SLC27A5ENSG00000083807.5292.66570161.618500.856606.289205.08350HepG2EIF4G2
SLC27A5ENSG00000083807.5161.94680306.57260-0.920707.988507.05740HepG2ETF1
SLC27A5ENSG00000083807.5101.04520156.38870-0.630102.404601.62740HepG2EWSR1
SLC27A5ENSG00000083807.5129.71810228.08230-0.814204.395103.41750HepG2FUBP3
SLC27A5ENSG00000083807.5188.48070302.62770-0.683103.550902.77370HepG2FXR1
SLC27A5ENSG00000083807.5146.3905089.807800.704802.302401.66470HepG2HNRNPC
SLC27A5ENSG00000083807.5173.93310284.31370-0.709003.707002.90700HepG2HNRNPK
SLC27A5ENSG00000083807.5175.9901087.006201.016204.529403.74270HepG2HNRNPLL
SLC27A5ENSG00000083807.5215.3620089.214301.2713010.057408.96060HepG2HNRNPU
SLC27A5ENSG00000083807.5180.0563089.082601.015102.896502.15570HepG2IGF2BP1
SLC27A5ENSG00000083807.5186.78100285.30820-0.611202.857702.17310HepG2IGF2BP2
SLC27A5ENSG00000083807.5116.62820267.80090-1.199203.626002.50080HepG2IGF2BP3
SLC27A5ENSG00000083807.5169.93520304.41690-0.841104.582303.78790HepG2MATR3
SLC27A5ENSG00000083807.5212.57800311.57860-0.551602.573401.96070HepG2NCBP2
SLC27A5ENSG00000083807.5462.73300277.439500.737905.294504.30570HepG2PABPC4
SLC27A5ENSG00000083807.549.2531093.57690-0.925902.821602.00460HepG2PRPF8
SLC27A5ENSG00000083807.5120.44100324.05150-1.4279016.4688015.34900HepG2PTBP1
SLC27A5ENSG00000083807.5340.56210161.844201.0732010.280909.22980HepG2PUF60
SLC27A5ENSG00000083807.5171.29210350.94340-1.034809.253608.20880HepG2QKI
SLC27A5ENSG00000083807.533.1910098.68240-1.572003.445502.66040HepG2RAVER1
SLC27A5ENSG00000083807.551.98660256.23100-2.3012023.7330022.51450HepG2RBM22
SLC27A5ENSG00000083807.5113.51040318.50840-1.4885014.8650013.36830HepG2RBM25
SLC27A5ENSG00000083807.5208.32160360.63340-0.791706.320005.55750HepG2NELFE
SLC27A5ENSG00000083807.5167.26060335.88970-1.005909.119708.09950HepG2RECQL
SLC27A5ENSG00000083807.5138.5164061.949801.160803.612202.69830HepG2RPS3A
SLC27A5ENSG00000083807.550.1175092.55870-0.885102.520701.76650HepG2RRP9
SLC27A5ENSG00000083807.583.35840199.77400-1.261006.858805.76410HepG2SF3A3
SLC27A5ENSG00000083807.5118.41850337.36900-1.5104017.1499015.86830HepG2SF3B4
SLC27A5ENSG00000083807.5240.79870155.244700.633203.014502.28580HepG2SLBP
SLC27A5ENSG00000083807.589.54940289.39130-1.6923019.2805018.27060HepG2SRFBP1
SLC27A5ENSG00000083807.5151.89120352.14450-1.2131012.4290011.58210HepG2SRSF1
SLC27A5ENSG00000083807.589.25530286.49190-1.6825019.7134018.48420HepG2SRSF9
SLC27A5ENSG00000083807.5171.76330316.53290-0.881906.928506.11090HepG2TAF15
SLC27A5ENSG00000083807.5153.60340290.83820-0.921006.995705.67400HepG2TIA1
SLC27A5ENSG00000083807.5135.7255087.462400.633902.450301.91250HepG2TRIM56
SLC27A5ENSG00000083807.569.48190158.19400-1.187002.973102.32290HepG2U2AF1
SLC27A5ENSG00000083807.5306.63690231.207200.407201.862601.37860K562AGGF1
SLC27A5ENSG00000083807.5213.13770425.59420-0.997708.152507.23350K562AQR
SLC27A5ENSG00000083807.5107.57150172.56980-0.681902.501601.67460K562BOP1
SLC27A5ENSG00000083807.5256.78910445.08370-0.793503.977002.66060K562CNOT7
SLC27A5ENSG00000083807.5433.57850630.72580-0.540703.330302.26030K562CELF1
SLC27A5ENSG00000083807.5310.04430399.68750-0.366402.152501.56620K562DDX47
SLC27A5ENSG00000083807.5188.54200302.52480-0.682204.863803.94640K562EIF2S2
SLC27A5ENSG00000083807.5382.38750512.77150-0.423302.858801.90510K562EIF4G2
SLC27A5ENSG00000083807.5340.00720237.051600.520302.861301.99740K562FIP1L1
SLC27A5ENSG00000083807.594.82470186.69790-0.977404.885003.74300K562FMR1
SLC27A5ENSG00000083807.585.62580158.24320-0.886003.611702.55500K562FTO
SLC27A5ENSG00000083807.57.2652071.57810-3.3005011.455109.81810K562G3BP2
SLC27A5ENSG00000083807.5107.53150175.18910-0.704202.807102.00660K562GPKOW
SLC27A5ENSG00000083807.5528.93680403.094300.391902.086801.42400K562GRSF1
SLC27A5ENSG00000083807.5126.13390206.20370-0.709103.137502.50750K562HNRNPC
SLC27A5ENSG00000083807.5338.22510194.979200.794604.886503.61010K562HNRNPM
SLC27A5ENSG00000083807.582.01730149.58950-0.867002.924701.96090K562KRR1
SLC27A5ENSG00000083807.5265.32130427.59460-0.688503.460602.06200K562PABPC1
SLC27A5ENSG00000083807.5225.13680145.805600.626702.817901.45540K562PCBP1
SLC27A5ENSG00000083807.5209.13910388.98660-0.895303.567002.62240K562PCBP3
SLC27A5ENSG00000083807.5203.57320298.33630-0.551401.998801.31620K562POLR2G
SLC27A5ENSG00000083807.5436.01540269.101700.696105.188804.00910K562PPIG
SLC27A5ENSG00000083807.5231.95030144.851600.679103.837803.06710K562PTBP1
SLC27A5ENSG00000083807.5435.90300595.27240-0.449502.641501.60070K562PUM1
SLC27A5ENSG00000083807.5407.41820238.642300.771605.389204.66340K562PUS1
SLC27A5ENSG00000083807.5320.44620232.471500.462902.288601.74000K562RBM15
SLC27A5ENSG00000083807.5257.41830382.35590-0.570803.606001.75990K562RBM17
SLC27A5ENSG00000083807.5279.63340168.669500.729202.330501.42480K562RCC2
SLC27A5ENSG00000083807.568.33610166.61080-1.285805.433704.03800K562SF3B1
SLC27A5ENSG00000083807.5264.89220159.895300.728203.893202.61380K562SRFBP1
SLC27A5ENSG00000083807.5393.95760142.022501.471806.953005.84170K562SRSF1
SLC27A5ENSG00000083807.5183.45200446.59040-1.283503.913401.58040K562SUGP2
SLC27A5ENSG00000083807.5161.82700435.35220-1.427706.109603.76060K562SUPT6H
SLC27A5ENSG00000083807.522.7741070.26280-1.625403.381301.70480K562TAF15
SLC27A5ENSG00000083807.5240.64190143.693800.743802.254601.61150K562TARDBP
SLC27A5ENSG00000083807.530.1519074.61410-1.307203.772501.89090K562TBRG4
SLC27A5ENSG00000083807.5220.54260138.620000.669803.323402.41580K562TIA1
SLC27A5ENSG00000083807.532.9681071.66070-1.120103.102802.25200K562U2AF2
SLC27A5ENSG00000083807.5291.94390373.03310-0.353602.034001.41190K562UPF1
SLC27A5ENSG00000083807.5137.40420371.01700-1.433104.949802.61140K562XPO5
SLC27A5ENSG00000083807.5209.07010428.33370-1.034703.176901.44070K562YTHDC2
SLC27A5ENSG00000083807.5315.67750479.41970-0.602804.582403.42980K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC27A5 is not available on ENCORE database.





6 RBPs can affect the splicing of SLC27A5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC27A5ENSG00000083807.5chr19-5901015159010282590098605901005859010489590106300.090000.003140.05234includedK562SRSF1
SESLC27A5ENSG00000083807.5chr19-590101515901028259009860590100585901048959010630-0.147000.000600.04763excludedHepG2DDX3X
SESLC27A5ENSG00000083807.5chr19-590101515901028259009860590100585901048959010630-0.241000.000000.00011excludedHepG2NCBP2
SESLC27A5ENSG00000083807.5chr19-590101515901028259009860590100585901048959010630-0.214000.000010.00070excludedHepG2MATR3
SESLC27A5ENSG00000083807.5chr19-590101515901028259009703590100585901048959010587-0.129000.001420.03390excludedHepG2SRSF1
SESLC27A5ENSG00000083807.5chr19-590101515901028259009860590100585901048959010630-0.194000.000030.00290excludedHepG2SF3B4
SESLC27A5ENSG00000083807.5chr19-590101515901028259009860590100585901048959010630-0.081000.002540.04119excludedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC27A5 is not avaliable on ENCORE database.