SLC26A1

General Information

Gene Name       : SLC26A1
Gene ID             : ENSG00000145217.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC26A1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC26A1ENSG00000145217.130.000.010.01ENCSR000AEF
HepG2SLC26A1ENSG00000145217.137.810.724.26ENCSR985KAT
K562SLC26A1ENSG00000145217.130.500.380.44ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC26A1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC26A1 RNA is bound by 17 proteins.  







eCLIP assay for SLC26A1 is not avaliable on ENCORE database.





17 proteins are bound to SLC26A1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4982093982146-3'-UTR,intron-Distal3.206934.64240HepG2XRN2
chr4982184982306-3'-UTR,intron-Distal4.0730412.09024HepG2UPF1
chr4981740981824-3'-UTR,intron-Distal,intron-Proximal5.217766.45671HepG2UPF1
chr4982211982265-3'-UTR,intron-Distal3.005263.59357HepG2NKRF
chr4981775981821-3'-UTR,intron-Distal,intron-Proximal3.886163.97690HepG2XRN2
chr4982082982169-3'-UTR,intron-Distal4.004976.15198HepG2UPF1
chr4981933982004-3'-UTR,intron-Distal4.921244.19989HepG2UPF1
chr4987009987119-5'-UTR,intron-Distal4.1798810.51866HepG2PRPF8
chr4987043987090-5'-UTR,intron-Distal4.458763.93614HepG2AQR
chr4987087987205-5'-UTR,intron-Distal,intron-Proximal4.9575429.99542HepG2DDX3X
chr4985500985565-5'-UTR,intron-Distal,intron-Proximal4.042019.14970HepG2SF3A3
chr4985497985591-5'-UTR,intron-Distal,intron-Proximal3.865567.84250HepG2AQR
chr4985495985585-5'-UTR,intron-Distal,intron-Proximal3.799975.34167HepG2SF3B4
chr4985500985571-5'-UTR,intron-Distal,intron-Proximal5.115756.47067K562SF3B4
chr4985286985408-CDS,intron-Distal3.7427016.19568HepG2DDX3X
chr4982912982989-CDS,intron-Distal4.221608.85622HepG2SLTM
chr4985035985158-CDS,intron-Distal,intron-Proximal3.405334.88141HepG2GRWD1
chr4984860984926-CDS,intron-Distal,intron-Proximal3.368327.02084HepG2PRPF8
chr4982717982756-CDS,intron-Distal3.551094.54081HepG2SLTM
chr4981038981083-intron-Distal3.751095.44474HepG2FAM120A
chr4980685980731-intron-Distal,intron-Proximal4.312796.13654HepG2DDX3X
chr4985986986073-intron-Distal3.591106.15806HepG2GTF2F1
chr4985999986070-intron-Distal3.350974.33964HepG2XRN2
chr4985968986061-intron-Distal3.219647.33857HepG2CSTF2T
chr4985982986070-intron-Distal3.532177.07486HepG2NKRF
chr4984650984734-intron-Distal3.597123.00463HepG2NKRF
chr4984673984719-intron-Distal3.266903.48399HepG2CSTF2T
chr4980378980572-intron-Distal3.930363.08342HepG2AKAP1
chr4979738979798-intron-Distal4.142664.13513HepG2LIN28B
chr4981032981088-intron-Distal4.007305.21824HepG2XRN2
chr4980674980735-5'-UTR,intron-Distal,intron-Proximal3.626523.20150HepG2AKAP1
chr4985959986078-intron-Distal6.2216017.80663HepG2PRPF4
chr4980678980726-5'-UTR,intron-Distal,intron-Proximal4.507305.21824HepG2XRN2
chr4984665984842-intron-Distal,intron-Proximal3.955969.37235HepG2RBFOX2
chr4980673980737-5'-UTR,intron-Distal,intron-Proximal3.321967.95421HepG2FAM120A
chr4980679980734-5'-UTR,intron-Distal,intron-Proximal4.150295.64146HepG2UPF1
chr4986835986932-intron-Distal3.824966.23207HepG2NKRF
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC26A1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC26A1 is not available on ENCORE database.

  • 94 RBPs can affect the levels of SLC26A1.  








The Knockdown/knockout RNA-Seq assay for SLC26A1 is not available on ENCORE database.





94 RBPs can affect the gene expression of SLC26A1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC26A1ENSG00000145217.9410.97750241.093400.769404.715903.51390HepG2ABCF1
SLC26A1ENSG00000145217.972.45570243.35880-1.7479018.7575017.47620HepG2ACO1
SLC26A1ENSG00000145217.965.7510028.835701.189102.731101.73930HepG2ADAR
SLC26A1ENSG00000145217.931.49280231.71730-2.879305.352204.64180HepG2AKAP1
SLC26A1ENSG00000145217.9136.99330249.05130-0.862306.144105.18530HepG2AUH
SLC26A1ENSG00000145217.9251.6882054.370202.2106016.3571014.47230HepG2BCLAF1
SLC26A1ENSG00000145217.9263.42140117.845301.160405.444704.63980HepG2BOP1
SLC26A1ENSG00000145217.9310.96020182.132700.771602.808502.03030HepG2CIRBP
SLC26A1ENSG00000145217.9297.75710108.179501.460606.408605.39620HepG2CPSF6
SLC26A1ENSG00000145217.978.8850029.570901.415504.583703.27470HepG2YBX3
SLC26A1ENSG00000145217.9173.4132074.461501.219503.308402.57110HepG2DDX21
SLC26A1ENSG00000145217.9130.7355057.567701.183203.123001.75830HepG2DDX27
SLC26A1ENSG00000145217.9458.52530157.961301.537304.633703.34020HepG2DDX5
SLC26A1ENSG00000145217.9743.44700232.819601.6749039.7279037.94900HepG2DKC1
SLC26A1ENSG00000145217.976.3133029.035701.394004.588803.70160HepG2DNAJC21
SLC26A1ENSG00000145217.983.9558028.780401.544404.508603.71170HepG2DNAJC2
SLC26A1ENSG00000145217.9280.6025082.023801.7743013.7318011.92220HepG2EEF2
SLC26A1ENSG00000145217.9106.4117047.316701.169104.163603.17540HepG2EIF4G2
SLC26A1ENSG00000145217.9298.39980208.844000.514702.306101.30350HepG2ESF1
SLC26A1ENSG00000145217.9555.22370285.975500.9571012.2870011.16640HepG2ETF1
SLC26A1ENSG00000145217.950.65210243.44510-2.2649016.1965014.59280HepG2FIP1L1
SLC26A1ENSG00000145217.9176.0778059.276001.570603.154902.19100HepG2GEMIN5
SLC26A1ENSG00000145217.9965.86170122.605502.9777022.0497020.43030HepG2GPKOW
SLC26A1ENSG00000145217.9141.4204029.313802.270203.754603.01880HepG2HNRNPA1
SLC26A1ENSG00000145217.9157.4638032.606602.271702.453701.79750HepG2HNRNPC
SLC26A1ENSG00000145217.9213.4549088.711601.266609.897708.64700HepG2HNRNPF
SLC26A1ENSG00000145217.9611.54560117.006902.3858041.2153039.22500HepG2HNRNPLL
SLC26A1ENSG00000145217.987.5314032.391001.434105.568204.73280HepG2HNRNPU
SLC26A1ENSG00000145217.9313.8365087.355501.8449020.2041018.44440HepG2IGF2BP1
SLC26A1ENSG00000145217.9738.12010192.629401.9379018.2182016.66460HepG2IGF2BP2
SLC26A1ENSG00000145217.979.8676033.086301.271304.386803.48300HepG2ILF2
SLC26A1ENSG00000145217.956.3009014.933401.914504.989203.32420HepG2KHDRBS1
SLC26A1ENSG00000145217.9338.23540222.439200.604504.802003.46540HepG2KIF1C
SLC26A1ENSG00000145217.9349.86150135.485101.368506.722205.41290HepG2LARP4
SLC26A1ENSG00000145217.9831.28360204.546402.0228021.4110019.67680HepG2MAGOH
SLC26A1ENSG00000145217.9450.34150205.651601.130703.875603.14010HepG2MATR3
SLC26A1ENSG00000145217.9243.24280119.385001.026703.551402.44410HepG2MTPAP
SLC26A1ENSG00000145217.9124.4629038.909501.677407.646905.30810HepG2NIP7
SLC26A1ENSG00000145217.9234.78930106.100101.145805.620503.58950HepG2NKRF
SLC26A1ENSG00000145217.9102.9778049.652301.052303.774402.88190HepG2NOL12
SLC26A1ENSG00000145217.9270.1611080.398801.748503.682002.02230HepG2NOLC1
SLC26A1ENSG00000145217.9265.7455056.574602.2317013.1936010.68060HepG2NONO
SLC26A1ENSG00000145217.9290.77100103.766701.486409.078307.78020HepG2NSUN2
SLC26A1ENSG00000145217.9173.6492042.562102.028405.633002.92350HepG2NUFIP2
SLC26A1ENSG00000145217.9365.69860187.283700.965302.007701.38430HepG2PABPC4
SLC26A1ENSG00000145217.9333.46710203.317100.713705.462804.65620HepG2PCBP1
SLC26A1ENSG00000145217.9114.5070055.059101.056304.049802.55410HepG2PKM
SLC26A1ENSG00000145217.9262.16460108.781801.268904.215301.99890HepG2PPIG
SLC26A1ENSG00000145217.9163.1583028.890102.4975019.4951017.67670HepG2PPIL4
SLC26A1ENSG00000145217.9437.0375047.395003.2048050.6847048.53670HepG2PUF60
SLC26A1ENSG00000145217.9187.5677050.309101.8984016.5964015.39510HepG2PUM1
SLC26A1ENSG00000145217.9638.25630247.871701.3644024.7604023.26040HepG2PUS1
SLC26A1ENSG00000145217.9103.19040295.84680-1.5195016.3027014.50200HepG2RBM15
SLC26A1ENSG00000145217.989.77740239.01610-1.4127011.6903010.77930HepG2RBM22
SLC26A1ENSG00000145217.9434.20800203.349801.094301.912401.34270HepG2RBM25
SLC26A1ENSG00000145217.9234.2912051.909202.1741015.8632013.52820HepG2RBM27
SLC26A1ENSG00000145217.9223.4369042.153202.4061012.5378010.34000HepG2RCC2
SLC26A1ENSG00000145217.9285.76300214.416500.414301.833601.31720HepG2RECQL
SLC26A1ENSG00000145217.9127.7169057.018601.163302.221201.37370HepG2RPS10
SLC26A1ENSG00000145217.9136.4436064.790501.074402.568501.97440HepG2RPS19
SLC26A1ENSG00000145217.9112.0789047.861501.227503.623302.71120HepG2RPS2
SLC26A1ENSG00000145217.9236.4271015.739203.9089035.0314032.35970HepG2RPS3A
SLC26A1ENSG00000145217.970.5737028.845401.290703.878703.13790HepG2SAFB2
SLC26A1ENSG00000145217.983.8311014.821802.499709.454307.18610HepG2SART3
SLC26A1ENSG00000145217.9195.7404041.320802.243907.612805.19650HepG2SF1
SLC26A1ENSG00000145217.9364.39480526.33930-0.530502.876202.18880HepG2SF3A3
SLC26A1ENSG00000145217.9390.04770115.799701.7519014.7208013.23020HepG2SF3B1
SLC26A1ENSG00000145217.9347.4844045.438602.9349052.1071049.88930HepG2SLBP
SLC26A1ENSG00000145217.963.9218033.638200.926102.166801.58610HepG2SMN1
SLC26A1ENSG00000145217.946.55300269.94830-2.5357030.3242029.12820HepG2SRFBP1
SLC26A1ENSG00000145217.9115.85990224.82290-0.956405.927605.30060HepG2SRSF1
SLC26A1ENSG00000145217.9196.2206046.792302.0680018.4455017.02920HepG2SRSF5
SLC26A1ENSG00000145217.9171.3947087.156800.975505.591904.65900HepG2SRSF7
SLC26A1ENSG00000145217.9843.23950234.358901.8471031.9394030.63180HepG2SSB
SLC26A1ENSG00000145217.9130.6993053.218601.296106.394005.51780HepG2SUCLG1
SLC26A1ENSG00000145217.9270.08730164.380800.716302.251201.39970HepG2SUPT6H
SLC26A1ENSG00000145217.9260.8747061.260002.0902013.8255012.50650HepG2SUPV3L1
SLC26A1ENSG00000145217.928.04110202.05500-2.8491027.7633026.22390HepG2TAF15
SLC26A1ENSG00000145217.9246.30960114.110001.109907.070405.98480HepG2TARDBP
SLC26A1ENSG00000145217.964.74790185.68710-1.5200011.138109.49370HepG2TIA1
SLC26A1ENSG00000145217.9143.2082031.472502.185805.914705.23500HepG2TIAL1
SLC26A1ENSG00000145217.9181.9808031.755302.5186023.3433021.90270HepG2TRIM56
SLC26A1ENSG00000145217.9301.5440046.298302.7032011.101909.15530HepG2TUFM
SLC26A1ENSG00000145217.9143.06180208.24820-0.541701.931101.39550HepG2U2AF1
SLC26A1ENSG00000145217.9181.9189049.003001.892302.216801.47220HepG2UBE2L3
SLC26A1ENSG00000145217.9929.06120466.782600.9929013.2393011.92620HepG2UPF1
SLC26A1ENSG00000145217.9353.94030450.66010-0.348501.952801.43150HepG2UTP3
SLC26A1ENSG00000145217.987.9040014.096502.6405011.238309.07990HepG2XPO5
SLC26A1ENSG00000145217.9218.8340060.304201.8594010.682009.27560HepG2XRN2
SLC26A1ENSG00000145217.9136.7567057.987101.237702.819501.51120HepG2ZRANB2
SLC26A1ENSG00000145217.951.9924021.858901.250002.900701.81820K562CCAR1
SLC26A1ENSG00000145217.920.7989053.04440-1.350703.029902.06990K562MBNL1
SLC26A1ENSG00000145217.916.1334044.25220-1.455702.505701.98300K562PUS1
SLC26A1ENSG00000145217.924.710205.101902.275903.290902.08820K562NELFE
SLC26A1ENSG00000145217.926.147004.948202.401603.373502.59810K562SRSF1
SLC26A1ENSG00000145217.919.341305.011701.948202.142801.51530K562TARDBP
SLC26A1ENSG00000145217.973.5827037.715800.964102.538401.84880K562UPF1
SLC26A1ENSG00000145217.963.1101032.560300.954702.237201.47300K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC26A1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SLC26A1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SLC26A1 is not avaliable on ENCORE database.