SIDT2

General Information

Gene Name       : SIDT2
Gene ID             : ENSG00000149577.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SIDT2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SIDT2ENSG00000149577.158.0011.079.54ENCSR000AEF
HepG2SIDT2ENSG00000149577.1515.949.7412.84ENCSR985KAT
K562SIDT2ENSG00000149577.1510.4010.5210.46ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SIDT2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SIDT2 RNA is bound by 12 proteins.  







eCLIP assay for SIDT2 is not avaliable on ENCORE database.





12 proteins are bound to SIDT2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11117052185117052308+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.881165.78807K562BUD13
chr11117052131117052170+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.073673.20743HepG2PPIG
chr11117067577117067653+3'-UTR,intron-Distal,intron-Proximal3.757173.07801K562UPF1
chr11117067267117067385+3'-UTR,intron-Distal4.035127.87505K562UPF1
chr11117067250117067324+3'-UTR,intron-Distal4.878727.21030HepG2UPF1
chr11117067999117068077+3'-UTR4.275096.74636K562UPF1
chr11117067899117067980+3'-UTR3.843085.91795HepG2UPF1
chr11117067341117067408+3'-UTR,intron-Distal4.191533.92497HepG2UPF1
chr11117067159117067250+3'-UTR,intron-Distal4.098537.31670HepG2UPF1
chr11117067327117067423+3'-UTR,intron-Distal4.358044.66439HepG2AKAP1
chr11117067190117067238+3'-UTR,intron-Distal4.310633.87930K562UPF1
chr11117067135117067191+3'-UTR,intron-Distal4.111913.34655HepG2AKAP1
chr11117067770117067844+3'-UTR4.717705.63383K562UPF1
chr11117052170117052244+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.130934.39623HepG2PPIG
chr11117063612117063661+5'-UTR,intron-Proximal3.411553.82205HepG2PRPF8
chr11117063522117063578+5'-UTR,CDS,intron-Proximal3.847414.16174HepG2PRPF8
chr11117062969117063043+CDS,intron-Proximal3.742843.25175K562YBX3
chr11117062554117062662+CDS,intron-Proximal4.068118.29266K562AQR
chr11117062566117062673+CDS,intron-Proximal3.407393.26275K562BUD13
chr11117054561117054595+CDS,intron-Distal,intron-Proximal4.176485.05122K562DDX24
chr11117059887117059954+CDS,intron-Distal3.683365.08507K562ZNF622
chr11117054789117054855+CDS,intron-Distal,intron-Proximal5.720987.12981K562DDX24
chr11117057296117057357+CDS,intron-Distal,intron-Proximal3.758643.86355HepG2PPIG
chr11117060065117060119+CDS,intron-Distal,intron-Proximal3.478933.86355HepG2PPIG
chr11117054789117054853+CDS,intron-Distal,intron-Proximal3.784876.13978HepG2PPIG
chr11117059444117059549+CDS,intron-Distal,intron-Proximal3.580144.44630K562ZNF622
chr11117058404117058456+CDS,intron-Distal,intron-Proximal4.784526.35567HepG2PRPF8
chr11117061454117061526+CDS,intron-Distal,intron-Proximal4.058436.32052K562AQR
chr11117060912117060997+CDS,intron-Distal4.225757.27704K562ZNF622
chr11117057268117057359+CDS,intron-Distal,intron-Proximal4.677899.08030K562AQR
chr11117060940117061006+CDS,intron-Distal,intron-Proximal4.316383.20743HepG2PPIG
chr11117057931117058040+intron-Distal,intron-Proximal4.305124.80493K562RBFOX2
chr11117057433117057489+intron-Distal,intron-Proximal5.370766.53290K562DDX24
chr11117058039117058093+intron-Distal,intron-Proximal3.916537.33504K562SF3B4
chr11117057451117057515+intron-Distal,intron-Proximal3.905175.64238K562PRPF8
chr11117056964117057076+intron-Distal,intron-Proximal5.100584.24111K562EFTUD2
chr11117056944117057022+intron-Distal,intron-Proximal4.181377.90583K562AQR
chr11117052405117052510+intron-Distal,intron-Proximal4.512969.62011K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SIDT2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SIDT2 is not available on ENCORE database.

  • 95 RBPs can affect the levels of SIDT2.  








The Knockdown/knockout RNA-Seq assay for SIDT2 is not available on ENCORE database.





95 RBPs can affect the gene expression of SIDT2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SIDT2ENSG00000149577.11644.82130967.66330-0.585605.007103.77880HepG2ABCF1
SIDT2ENSG00000149577.11578.27450779.65500-0.431104.414503.68160HepG2ACO1
SIDT2ENSG00000149577.11448.66630615.02170-0.455002.954301.92620HepG2ADAR
SIDT2ENSG00000149577.11776.555501178.06100-0.601304.705904.03510HepG2AKAP1
SIDT2ENSG00000149577.11668.59890926.05540-0.470003.513202.64860HepG2CIRBP
SIDT2ENSG00000149577.11401.88500529.80340-0.398702.204901.58300HepG2CPSF6
SIDT2ENSG00000149577.11589.20670873.72100-0.568404.137303.38150HepG2CELF1
SIDT2ENSG00000149577.111107.39750939.353800.237302.582001.86170HepG2DAZAP1
SIDT2ENSG00000149577.111278.24730658.238900.9574015.7910014.32910HepG2DDX21
SIDT2ENSG00000149577.11782.59080597.303100.389702.689401.71920HepG2DHX30
SIDT2ENSG00000149577.11967.50500745.879900.375203.185802.46770HepG2DKC1
SIDT2ENSG00000149577.11871.54080613.853900.505607.512006.50870HepG2DNAJC2
SIDT2ENSG00000149577.11577.59730733.95470-0.345602.417301.32770HepG2EIF2S2
SIDT2ENSG00000149577.11705.361401002.72610-0.507502.910602.20550HepG2EIF4B
SIDT2ENSG00000149577.11875.408501159.88880-0.406003.882503.19070HepG2ETF1
SIDT2ENSG00000149577.11544.99910761.72960-0.483002.134101.40130HepG2EWSR1
SIDT2ENSG00000149577.111401.69480600.556601.2227018.7977017.28290HepG2GPKOW
SIDT2ENSG00000149577.11773.72980625.210700.307401.883001.33830HepG2HNRNPA1
SIDT2ENSG00000149577.11892.61980695.446300.360002.463701.80650HepG2HNRNPC
SIDT2ENSG00000149577.11872.09690703.491200.309902.567201.87530HepG2HNRNPF
SIDT2ENSG00000149577.11581.85430976.30280-0.746708.188307.03570HepG2HNRNPK
SIDT2ENSG00000149577.11681.17360855.64580-0.329003.152802.43630HepG2HNRNPL
SIDT2ENSG00000149577.11961.21950573.123800.745907.706806.71600HepG2HNRNPLL
SIDT2ENSG00000149577.11420.59200674.06520-0.680507.047405.63220HepG2HNRNPM
SIDT2ENSG00000149577.11945.32100692.733500.448404.058303.19500HepG2IGF2BP1
SIDT2ENSG00000149577.11532.69330919.59390-0.787702.541301.60150HepG2IGF2BP3
SIDT2ENSG00000149577.11902.45480712.609500.340603.864602.66310HepG2KIF1C
SIDT2ENSG00000149577.11475.91910632.56550-0.410502.784401.64600HepG2LARP7
SIDT2ENSG00000149577.111049.69300790.660800.408703.293202.41420HepG2MSI2
SIDT2ENSG00000149577.11876.76570584.548500.584803.351202.27810HepG2MTPAP
SIDT2ENSG00000149577.111356.904701069.916900.342702.073701.52130HepG2NCBP2
SIDT2ENSG00000149577.11542.39090683.80180-0.334202.697401.85900HepG2PARN
SIDT2ENSG00000149577.11753.45060994.21890-0.400104.624203.87410HepG2PCBP1
SIDT2ENSG00000149577.11515.27770810.31810-0.653109.390408.08850HepG2PRPF4
SIDT2ENSG00000149577.11302.41540437.28220-0.532002.795001.98230HepG2PRPF8
SIDT2ENSG00000149577.111314.50520889.197700.563804.118503.40760HepG2PUF60
SIDT2ENSG00000149577.11580.04340943.95850-0.7026013.1913012.10010HepG2PUM1
SIDT2ENSG00000149577.111445.69510794.107300.8643023.9219022.44150HepG2PUS1
SIDT2ENSG00000149577.11328.64120661.09280-1.008306.457305.40580HepG2RAVER1
SIDT2ENSG00000149577.11549.06240969.43380-0.8202013.7219012.74290HepG2RBM22
SIDT2ENSG00000149577.11668.91370994.36860-0.572006.202505.22990HepG2RBM25
SIDT2ENSG00000149577.11545.75510762.77710-0.483003.678402.52600HepG2RBM27
SIDT2ENSG00000149577.11897.955301125.87810-0.326303.242202.66640HepG2NELFE
SIDT2ENSG00000149577.11855.046001048.62020-0.294402.730602.11790HepG2RECQL
SIDT2ENSG00000149577.11546.38570718.10360-0.394302.656401.60410HepG2RPS5
SIDT2ENSG00000149577.11245.21050432.56470-0.818905.282204.22860HepG2RRP9
SIDT2ENSG00000149577.11674.95400498.666600.436602.667801.74670HepG2SERBP1
SIDT2ENSG00000149577.11868.72310416.467301.060603.309901.79680HepG2SF1
SIDT2ENSG00000149577.11677.24510955.29250-0.496302.183101.58340HepG2SF3A3
SIDT2ENSG00000149577.11590.984301053.25440-0.8337015.9046014.66560HepG2SF3B4
SIDT2ENSG00000149577.11995.66760852.675800.223602.177101.54220HepG2SLBP
SIDT2ENSG00000149577.11582.95880717.43710-0.299502.734502.09280HepG2SMN1
SIDT2ENSG00000149577.11511.590601094.90700-1.0977022.1567021.09210HepG2SRFBP1
SIDT2ENSG00000149577.11860.043901099.37830-0.354203.853503.31850HepG2SRSF1
SIDT2ENSG00000149577.11419.06810610.41160-0.542602.955201.91390HepG2SRSF3
SIDT2ENSG00000149577.11861.85020691.172400.318302.085301.47150HepG2SRSF7
SIDT2ENSG00000149577.11602.13620894.41020-0.570808.322907.45770HepG2SRSF9
SIDT2ENSG00000149577.11638.53650998.48680-0.6450010.785109.69290HepG2SUCLG1
SIDT2ENSG00000149577.111067.46630558.662800.9340012.9396011.55100HepG2TARDBP
SIDT2ENSG00000149577.11276.22660378.21620-0.453402.442201.49820HepG2TFIP11
SIDT2ENSG00000149577.11974.07370677.291700.524207.758906.89190HepG2TRIM56
SIDT2ENSG00000149577.11484.68060835.75780-0.786107.993706.92800HepG2U2AF1
SIDT2ENSG00000149577.111124.27910847.194200.408105.415904.48970HepG2UPF1
SIDT2ENSG00000149577.11450.88130799.70560-0.8267015.2446013.87380HepG2ZC3H8
SIDT2ENSG00000149577.111143.63030931.757400.295503.574902.97480HepG2ZNF622
SIDT2ENSG00000149577.11582.09110892.65450-0.616905.718703.95690K562ABCF1
SIDT2ENSG00000149577.11973.210101232.51880-0.340802.933102.35050K562AGGF1
SIDT2ENSG00000149577.11750.21820576.523800.379803.729502.60700K562BCLAF1
SIDT2ENSG00000149577.11974.14220686.743300.504304.021002.18190K562CEBPZ
SIDT2ENSG00000149577.11769.82400607.940700.340502.396801.66210K562CPSF6
SIDT2ENSG00000149577.11560.65190437.379000.358102.450401.46480K562CSTF2
SIDT2ENSG00000149577.111121.77620789.403100.506904.212202.69810K562DDX21
SIDT2ENSG00000149577.11889.26290573.502500.632707.150405.37380K562DDX3X
SIDT2ENSG00000149577.11841.28750629.857200.417504.199302.68480K562EIF2S1
SIDT2ENSG00000149577.11594.15240766.85000-0.368103.233802.46620K562EIF2S2
SIDT2ENSG00000149577.11754.31780524.338900.524603.741002.66400K562FTO
SIDT2ENSG00000149577.11451.01940623.07130-0.466204.277203.54840K562FXR1
SIDT2ENSG00000149577.11135.57270345.18980-1.348307.208605.95330K562G3BP2
SIDT2ENSG00000149577.111024.33000764.622300.421804.582603.12100K562GLRX3
SIDT2ENSG00000149577.11932.83780580.418000.684407.577406.25970K562GPKOW
SIDT2ENSG00000149577.11885.77330714.302100.310302.313401.33770K562HNRNPA1
SIDT2ENSG00000149577.11894.69430529.497100.756709.208008.16910K562HNRNPC
SIDT2ENSG00000149577.11670.43170472.875200.503503.974802.57800K562HNRNPF
SIDT2ENSG00000149577.11387.79530527.86950-0.444902.322801.47420K562HNRNPM
SIDT2ENSG00000149577.11746.90000512.849800.542304.705502.82140K562LARP7
SIDT2ENSG00000149577.111199.478601524.66420-0.346102.736701.83410K562MBNL1
SIDT2ENSG00000149577.11748.60880566.559400.401902.937702.03350K562METAP2
SIDT2ENSG00000149577.111072.91790803.906800.416305.292404.19910K562MTPAP
SIDT2ENSG00000149577.11867.56200598.317600.536005.436103.71880K562NCBP2
SIDT2ENSG00000149577.111340.42800893.178000.5856013.0218011.56800K562NSUN2
SIDT2ENSG00000149577.111481.63130821.262200.851206.643204.74460K562PABPC1
SIDT2ENSG00000149577.11975.02040587.898600.729803.215502.12610K562PABPN1
SIDT2ENSG00000149577.11720.78550516.979400.479403.713302.01970K562PHF6
SIDT2ENSG00000149577.11386.88900568.55150-0.555403.695702.82760K562PRPF8
SIDT2ENSG00000149577.11648.55870474.759000.449903.027602.07650K562PSIP1
SIDT2ENSG00000149577.111008.990501269.79180-0.331703.513402.30110K562PUM1
SIDT2ENSG00000149577.11613.25830433.201100.501404.035802.83700K562RCC2
SIDT2ENSG00000149577.11442.19530578.99110-0.388902.090801.38520K562RPS19
SIDT2ENSG00000149577.111145.02450881.390200.377404.220403.22770K562SF3A3
SIDT2ENSG00000149577.111140.13740655.361500.798703.562802.01410K562SFPQ
SIDT2ENSG00000149577.111174.20830799.892300.553703.273201.35900K562SMN1
SIDT2ENSG00000149577.11641.34610410.658400.643105.591703.98570K562SRFBP1
SIDT2ENSG00000149577.111236.12700903.007900.452907.093805.67040K562SRPK2
SIDT2ENSG00000149577.11833.53370551.343200.596202.851602.13580K562SRSF1
SIDT2ENSG00000149577.11716.63820559.177700.357802.304601.35970K562SRSF4
SIDT2ENSG00000149577.111041.42670704.606300.563605.256103.62100K562SRSF7
SIDT2ENSG00000149577.11888.89540550.225800.691905.810704.30040K562SUPV3L1
SIDT2ENSG00000149577.11622.70070921.23970-0.565006.399905.14410K562SYNCRIP
SIDT2ENSG00000149577.11772.01940538.138700.520602.202801.47940K562TIA1
SIDT2ENSG00000149577.11827.07340456.633300.856909.090607.32410K562TIAL1
SIDT2ENSG00000149577.11826.97420485.164000.769308.864406.96410K562TRIM56
SIDT2ENSG00000149577.111403.703701084.414200.372204.975203.26320K562TROVE2
SIDT2ENSG00000149577.111836.650501345.914400.448404.169002.44530K562UBE2L3
SIDT2ENSG00000149577.11764.45070582.473800.392102.260001.34890K562UCHL5
SIDT2ENSG00000149577.111258.29320947.058400.409805.826504.82790K562UPF1
SIDT2ENSG00000149577.111007.21180810.363500.313602.411101.59200K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SIDT2 is not available on ENCORE database.





11 RBPs can affect the splicing of SIDT2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESIDT2ENSG00000149577.11chr11+1170586071170586701170583431170584151170594231170595420.090000.000010.00145includedHepG2TBRG4
SESIDT2ENSG00000149577.11chr11+1170586071170586701170583431170584151170594231170595420.180000.000060.00889includedHepG2QKI
SESIDT2ENSG00000149577.11chr11+1170586071170586701170583431170584151170594231170595420.385000.000000.00076includedHepG2DDX3X
SESIDT2ENSG00000149577.11chr11+1170586071170586701170583431170584151170594231170595420.221000.000210.01806includedHepG2NCBP2
SESIDT2ENSG00000149577.11chr11+1170586071170586701170583431170584151170594231170595420.203000.000030.00248includedHepG2PTBP1
SESIDT2ENSG00000149577.11chr11+1170586071170586701170583431170584151170594231170595420.149000.000210.03809includedHepG2HNRNPA1
SESIDT2ENSG00000149577.11chr11+117064568117064679117063868117063974117066517117066631-0.123000.000410.02133excludedHepG2MATR3
SESIDT2ENSG00000149577.11chr11+1170586071170586701170583431170584151170594231170595420.220000.000010.00044includedHepG2SRSF1
SESIDT2ENSG00000149577.11chr11+1170586071170586701170583431170584151170594231170595420.337000.000000.00002includedHepG2SSB
A3SSSIDT2ENSG00000149577.11chr11+1170534031170535221170534381170535221170532341170533360.186000.001740.04156longerHepG2U2AF2
A3SSSIDT2ENSG00000149577.11chr11+117059423117059542117059444117059542117058343117058415-0.122000.000030.00150shorterHepG2U2AF2
RISIDT2ENSG00000149577.11chr11+1170600501170607411170600501170601171170606671170607410.129000.000100.00081includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SIDT2 is not avaliable on ENCORE database.