RBBP7

General Information

Gene Name : RBBP7
Gene ID : ENSG00000102054.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RBBP7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RBBP7	ENSG00000102054.17	171.40	138.19	154.80	ENCSR000AEF
HepG2	RBBP7	ENSG00000102054.17	106.05	139.23	122.64	ENCSR985KAT
K562	RBBP7	ENSG00000102054.17	133.40	144.29	138.84	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RBBP7 is not avaliable on ENCORE database.

Proteins bound to RNA

RBBP7 RNA is bound by 28 proteins.

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eCLIP assay for RBBP7 is not avaliable on ENCORE database.

28 proteins are bound to RBBP7 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	16862943	16862998	-	3'-UTR,intron-Distal	5.49626	79.76038	K562	PUM2
chrX	16862886	16862991	-	3'-UTR,intron-Distal	6.64549	64.56814	HepG2	SUB1
chrX	16863015	16863075	-	3'-UTR,intron-Distal,intron-Proximal	6.99034	62.39204	HepG2	SUB1
chrX	16862998	16863026	-	3'-UTR,intron-Distal	5.25815	49.23155	K562	PUM2
chrX	16862991	16863015	-	3'-UTR,intron-Distal	6.45732	44.10963	HepG2	SUB1
chrX	16863026	16863070	-	3'-UTR,intron-Distal,intron-Proximal	4.35151	33.24522	K562	PUM2
chrX	16888302	16888416	-	5'-UTR,intron-Distal,intron-Proximal	3.89626	28.72029	K562	DDX3X
chrX	16862876	16863006	-	3'-UTR,intron-Distal	4.56319	18.07970	K562	NOLC1
chrX	16887194	16887283	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.32088	17.09618	K562	UCHL5
chrX	16888416	16888482	-	5'-UTR,intron-Distal,intron-Proximal	4.20289	15.33720	K562	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 75 entries

eCLIP assay for RBBP7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RBBP7 is not available on ENCORE database.
97 RBPs can affect the levels of RBBP7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RBBP7 is not available on ENCORE database.

97 RBPs can affect the gene expression of RBBP7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RBBP7	ENSG00000102054.13	1122.14460	2250.90210	-1.00420	40.82420	39.15980	HepG2	ACO1
RBBP7	ENSG00000102054.13	1764.40280	3309.20710	-0.90730	26.21900	24.06560	HepG2	NOL12
RBBP7	ENSG00000102054.13	3961.77960	8000.68920	-1.01400	25.15990	23.58110	K562	AQR
RBBP7	ENSG00000102054.13	1579.10130	2708.05380	-0.77820	24.96510	23.49110	HepG2	SF3B4
RBBP7	ENSG00000102054.13	1193.72800	1954.49990	-0.71130	23.84360	21.94620	HepG2	ILF2
RBBP7	ENSG00000102054.13	2503.57310	5000.26330	-0.99800	20.93660	18.61570	K562	TARDBP
RBBP7	ENSG00000102054.13	2143.22330	3344.83890	-0.64220	18.72630	17.23870	HepG2	AUH
RBBP7	ENSG00000102054.13	6806.27800	4716.06280	0.52920	17.52870	16.22360	K562	AGGF1
RBBP7	ENSG00000102054.13	3985.81320	5583.12550	-0.48620	17.26270	15.20940	K562	SRPK2
RBBP7	ENSG00000102054.13	8499.18760	4866.44420	0.80440	15.99880	14.73450	K562	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 116 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RBBP7 is not available on ENCORE database.

9 RBPs can affect the splicing of RBBP7 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RBBP7	ENSG00000102054.13	chrX	-	16870673	16870751			16870168	16870245	16870871	16870998	-0.05400	0.00000	0.00001	excluded	K562	U2AF2
MXE	RBBP7	ENSG00000102054.13	chrX	-	16870538	16870673	16870673	16870751	16870168	16870245	16870871	16870998	-0.07500	0.00000	0.00000	2included	K562	U2AF2
A3SS	RBBP7	ENSG00000102054.13	chrX	-	16876798	16876972			16876798	16876945	16881077	16881223	-0.05500	0.00001	0.00137	shorter	K562	HNRNPC
MXE	RBBP7	ENSG00000102054.13	chrX	-	16870538	16870640	16870673	16870751	16870168	16870245	16870871	16871093	-0.06400	0.00002	0.00408	2included	HepG2	PRPF8
RI	RBBP7	ENSG00000102054.13	chrX	-	16870673	16870905			16870673	16870751	16870871	16870905	0.05300	0.00006	0.00128	included	HepG2	HNRNPK
SE	RBBP7	ENSG00000102054.13	chrX	-	16870871	16870905			16870673	16870751	16871804	16871965	-0.08200	0.00014	0.00224	excluded	K562	AQR
MXE	RBBP7	ENSG00000102054.13	chrX	-	16881077	16881223	16887198	16887343	16876798	16876972	16888160	16888537	-0.07200	0.00086	0.06678	2included	K562	PUM1
A5SS	RBBP7	ENSG00000102054.13	chrX	-	16870673	16870905			16870871	16870905	16870168	16870245	-0.05500	0.00089	0.08266	shorter	K562	U2AF1
MXE	RBBP7	ENSG00000102054.13	chrX	-	16870538	16870673	16870673	16870751	16870168	16870245	16870871	16870998	-0.18600	0.00091	0.02072	2included	HepG2	FTO
MXE	RBBP7	ENSG00000102054.13	chrX	-	16870538	16870640	16870673	16870751	16870168	16870245	16870871	16870998	-0.05800	0.00116	0.02394	2included	HepG2	U2AF1

Showing 1 to 10 of 12 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RBBP7

General Information

Functions

Localization

Domains (AlphaFold: RBBP7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RBBP7 is not avaliable on ENCORE database.

28 proteins are bound to RBBP7 RNA:

eCLIP assay for RBBP7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RBBP7 is not available on ENCORE database.

97 RBPs can affect the gene expression of RBBP7 :

The Knockdown/knockout RNA-Seq assay for RBBP7 is not available on ENCORE database.

9 RBPs can affect the splicing of RBBP7 :

The Knockdown/knockout RNA-Seq assay for RBBP7 is not avaliable on ENCORE database.