POLR3K

General Information

Gene Name       : POLR3K
Gene ID             : ENSG00000161980.5
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: POLR3K)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878POLR3KENSG00000161980.514.5726.6120.59ENCSR000AEF
HepG2POLR3KENSG00000161980.533.8919.8426.87ENCSR985KAT
K562POLR3KENSG00000161980.558.7545.8552.30ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for POLR3K is not avaliable on ENCORE database.



Proteins bound to RNA
  • POLR3K RNA is bound by 13 proteins.  







eCLIP assay for POLR3K is not avaliable on ENCORE database.





13 proteins are bound to POLR3K RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr169727097470-3'-UTR,CDS,intron-Distal4.7935512.05179HepG2LARP4
chr169718397286-3'-UTR,intron-Distal,intron-Proximal4.012266.01926K562LIN28B
chr169718597409-3'-UTR,intron-Distal,intron-Proximal3.109594.96548K562NOLC1
chr169728697342-3'-UTR,intron-Distal3.373733.71253K562LIN28B
chr169719197249-3'-UTR,intron-Distal,intron-Proximal3.919924.35885HepG2SUB1
chr169728497356-3'-UTR,intron-Distal5.4739211.71197HepG2SUB1
chr169721897294-3'-UTR,intron-Distal,intron-Proximal4.0072610.31453K562PABPC4
chr16103474103594-5'-UTR,CDS,intron-Distal3.4131822.70732K562DDX3X
chr16103469103592-5'-UTR,CDS,intron-Distal4.535055.13243HepG2GRWD1
chr169751197577-CDS,intron-Distal4.079723.56076K562BUD13
chr16101559101607-CDS,intron-Distal5.334057.40172K562RPS3
chr16101575101646-CDS,intron-Distal,intron-Proximal3.702103.66187K562ZNF622
chr169822898355-intron-Distal3.118453.98838K562ILF3
chr16103426103476-intron-Distal3.942344.89208K562AQR
chr16101412101530-intron-Distal,intron-Proximal4.330577.99418K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for POLR3K is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for POLR3K is not available on ENCORE database.

  • 86 RBPs can affect the levels of POLR3K.  








The Knockdown/knockout RNA-Seq assay for POLR3K is not available on ENCORE database.





86 RBPs can affect the gene expression of POLR3K :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
POLR3KENSG00000161980.5375.86380232.921900.690303.589102.99350HepG2AKAP1
POLR3KENSG00000161980.5277.88780374.19840-0.429302.678002.00190HepG2AUH
POLR3KENSG00000161980.5145.97680231.40450-0.664702.652201.77040HepG2BCLAF1
POLR3KENSG00000161980.5131.70680198.10290-0.588902.947802.26590HepG2CKAP4
POLR3KENSG00000161980.5209.46080137.266100.609601.955001.31740HepG2CNOT7
POLR3KENSG00000161980.567.83940122.72390-0.855202.826402.13290HepG2CPSF6
POLR3KENSG00000161980.577.84450139.36440-0.840202.426201.51060HepG2DDX59
POLR3KENSG00000161980.5106.30500167.32860-0.654502.619401.66320HepG2DHX30
POLR3KENSG00000161980.5100.08840184.26630-0.880503.769403.08440HepG2EIF2S1
POLR3KENSG00000161980.5293.93920198.252800.568102.180101.56740HepG2EIF4B
POLR3KENSG00000161980.5219.99820308.91100-0.489702.511901.70650HepG2EIF4G1
POLR3KENSG00000161980.5203.39270295.90360-0.540902.252301.51220HepG2EIF4G2
POLR3KENSG00000161980.5279.34070429.61720-0.621004.776204.02510HepG2ETF1
POLR3KENSG00000161980.5286.86790193.624600.567003.089202.20930HepG2EWSR1
POLR3KENSG00000161980.5315.84640205.426900.620503.166802.42710HepG2FXR1
POLR3KENSG00000161980.576.79750139.09680-0.857002.685002.05290HepG2GPKOW
POLR3KENSG00000161980.596.98800175.15580-0.852803.564802.84420HepG2HNRNPA1
POLR3KENSG00000161980.5205.77320287.73750-0.483702.319501.45550HepG2HNRNPA2B1
POLR3KENSG00000161980.5176.65460259.04450-0.552303.378702.59250HepG2HNRNPF
POLR3KENSG00000161980.557.50260132.74450-1.207004.808104.00200HepG2HNRNPLL
POLR3KENSG00000161980.591.16190193.53230-1.086107.198906.25790HepG2HNRNPU
POLR3KENSG00000161980.542.98630101.28940-1.236504.150702.60780HepG2KRR1
POLR3KENSG00000161980.5292.31610205.498400.508302.193601.60750HepG2MAGOH
POLR3KENSG00000161980.5322.77450206.656700.643203.117002.45070HepG2MATR3
POLR3KENSG00000161980.5142.92800240.45670-0.750502.512001.47520HepG2NONO
POLR3KENSG00000161980.584.79730148.16270-0.805102.854201.79650HepG2PCBP2
POLR3KENSG00000161980.5114.10450172.61680-0.597202.589701.87530HepG2PPIL4
POLR3KENSG00000161980.584.26010201.98190-1.261306.979605.76570HepG2PRPF8
POLR3KENSG00000161980.5403.23630314.611200.358002.729002.13960HepG2PUM1
POLR3KENSG00000161980.5146.32390201.82990-0.464002.074301.52280HepG2PUS1
POLR3KENSG00000161980.5115.99730171.91820-0.567602.246201.46320HepG2RBM15
POLR3KENSG00000161980.5278.27930359.08310-0.367801.894101.44420HepG2RBM22
POLR3KENSG00000161980.5162.31390279.10680-0.782005.045904.16020HepG2RPLP0
POLR3KENSG00000161980.584.45870199.80070-1.242206.453405.30780HepG2RRP9
POLR3KENSG00000161980.5257.56160155.732600.725702.652301.99230HepG2SF3A3
POLR3KENSG00000161980.5178.67750284.20630-0.669604.196003.35730HepG2SLBP
POLR3KENSG00000161980.584.02660146.18650-0.798902.373101.65140HepG2SNRNP70
POLR3KENSG00000161980.5145.90290405.57580-1.4750020.1555019.12800HepG2SRFBP1
POLR3KENSG00000161980.5325.73710222.269000.551303.017202.52850HepG2SRSF1
POLR3KENSG00000161980.5144.68250254.51470-0.814906.018305.05480HepG2SRSF7
POLR3KENSG00000161980.5102.58100180.82340-0.817804.495503.82380HepG2SRSF9
POLR3KENSG00000161980.5172.02090352.14400-1.0336010.784509.90060HepG2SSB
POLR3KENSG00000161980.5132.96020260.66190-0.971204.939104.07580HepG2SUPV3L1
POLR3KENSG00000161980.5125.53770199.77030-0.670203.134002.54230HepG2TAF15
POLR3KENSG00000161980.5119.88780188.08590-0.649702.921602.41060HepG2TIAL1
POLR3KENSG00000161980.5101.80660189.73170-0.898105.647604.89470HepG2TRIM56
POLR3KENSG00000161980.5153.99520306.52740-0.993102.603001.79130HepG2UBE2L3
POLR3KENSG00000161980.5263.24510133.341100.981207.224306.33240HepG2UTP3
POLR3KENSG00000161980.51064.69030759.871500.486506.828005.99410K562AGGF1
POLR3KENSG00000161980.51076.97390790.693100.445704.147903.34470K562AKAP8L
POLR3KENSG00000161980.51117.032101653.66810-0.566006.153005.33750K562AQR
POLR3KENSG00000161980.5278.59510422.32340-0.600203.615002.61880K562BOP1
POLR3KENSG00000161980.5285.68240493.66400-0.789107.074005.19830K562CCAR1
POLR3KENSG00000161980.5616.461601109.52500-0.847902.502201.50170K562CNOT7
POLR3KENSG00000161980.5347.59980449.03010-0.369402.071601.38410K562CPSF6
POLR3KENSG00000161980.51130.16690927.986200.284302.695701.39480K562DDX27
POLR3KENSG00000161980.51273.587801043.767200.287003.061202.37990K562DDX47
POLR3KENSG00000161980.51149.85900850.764900.434503.457802.46350K562DKC1
POLR3KENSG00000161980.5634.90880895.94830-0.496904.215703.07180K562EFTUD2
POLR3KENSG00000161980.5987.349001412.27950-0.516408.122406.98890K562EIF2S2
POLR3KENSG00000161980.5868.15530505.430500.7803011.221109.60290K562EIF3G
POLR3KENSG00000161980.51549.615602049.76980-0.403605.808604.46980K562EIF4G2
POLR3KENSG00000161980.5441.16860644.45690-0.546803.839802.48200K562FKBP4
POLR3KENSG00000161980.5294.07700456.91780-0.635704.281703.21770K562FMR1
POLR3KENSG00000161980.5245.14560387.29660-0.659804.090902.96170K562FTO
POLR3KENSG00000161980.51257.61540772.095700.703709.976808.91180K562FXR1
POLR3KENSG00000161980.5925.48960702.046400.398603.252201.67300K562G3BP1
POLR3KENSG00000161980.5303.93560536.35450-0.819405.838204.72520K562G3BP2
POLR3KENSG00000161980.5641.01550898.26230-0.486803.628901.96440K562GEMIN5
POLR3KENSG00000161980.5259.97830428.69660-0.721605.394704.29220K562GPKOW
POLR3KENSG00000161980.52516.496401881.839900.419204.761403.77040K562GRSF1
POLR3KENSG00000161980.51009.889501303.12210-0.367803.439402.23710K562HNRNPA1
POLR3KENSG00000161980.5377.15250741.58350-0.9755012.9573011.74160K562HNRNPC
POLR3KENSG00000161980.5506.61510662.41380-0.386802.590001.48930K562HNRNPF
POLR3KENSG00000161980.51211.51100670.180200.8541010.024308.01700K562HNRNPM
POLR3KENSG00000161980.5854.272301443.12020-0.7564014.5941012.61930K562HNRNPU
POLR3KENSG00000161980.5343.70260498.47930-0.536403.569101.88650K562KHDRBS1
POLR3KENSG00000161980.5145.87590366.09710-1.327509.957708.06820K562KRR1
POLR3KENSG00000161980.51154.94400771.710000.581606.874305.52110K562MAGOH
POLR3KENSG00000161980.51024.94110770.072200.412403.785102.69160K562MATR3
POLR3KENSG00000161980.5310.98630418.46280-0.428202.384701.57420K562METAP2
POLR3KENSG00000161980.51639.066102184.83860-0.414703.992302.63890K562MSI2
POLR3KENSG00000161980.5925.18540658.866800.489703.008102.08130K562NAA15
POLR3KENSG00000161980.5792.95680951.63260-0.263202.706601.96750K562NSUN2
POLR3KENSG00000161980.5443.78930876.85010-0.9825011.362109.67670K562PCBP3
POLR3KENSG00000161980.51074.888901427.98560-0.409803.119301.45820K562PKM
POLR3KENSG00000161980.5381.84160672.57470-0.816709.671208.21170K562POLR2G
POLR3KENSG00000161980.51266.32030924.958900.453103.327702.41330K562PPIG
POLR3KENSG00000161980.51001.68740749.800000.417803.931603.15330K562PTBP1
POLR3KENSG00000161980.51876.804602330.75890-0.312503.921502.77380K562PUM2
POLR3KENSG00000161980.5268.47900407.76640-0.602903.242602.18780K562SF3B1
POLR3KENSG00000161980.51088.93550735.107300.566803.747002.92970K562SRSF1
POLR3KENSG00000161980.5683.92770901.73060-0.398903.827702.43680K562SRSF7
POLR3KENSG00000161980.5532.46770765.55350-0.523805.254103.10390K562SRSF9
POLR3KENSG00000161980.5238.65500521.35470-1.1273015.6324012.73950K562SSB
POLR3KENSG00000161980.5610.86590843.97450-0.466303.163602.07550K562SUPV3L1
POLR3KENSG00000161980.5233.08880526.49100-1.175506.473203.81900K562TAF15
POLR3KENSG00000161980.5454.82460679.70490-0.579605.039603.67090K562TRIM56
POLR3KENSG00000161980.5376.06560519.84430-0.467102.573201.52380K562U2AF1
POLR3KENSG00000161980.5319.69140536.90490-0.748007.772406.41570K562U2AF2
POLR3KENSG00000161980.51794.993102521.59800-0.490406.483204.41690K562UBE2L3
POLR3KENSG00000161980.5541.82110893.33240-0.721407.399305.65960K562UCHL5
POLR3KENSG00000161980.5831.975101009.03450-0.278402.710001.99820K562UPF1
POLR3KENSG00000161980.5620.80640863.40180-0.475904.445403.32430K562WDR3
POLR3KENSG00000161980.51324.037501863.06310-0.492705.002903.78780K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for POLR3K is not available on ENCORE database.






No RBPs affect the alternative splcing events of POLR3K on ENCORE database.





The Knockdown/knockout RNA-Seq assay for POLR3K is not avaliable on ENCORE database.