POLR3E

General Information

Gene Name       : POLR3E
Gene ID             : ENSG00000058600.15
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: POLR3E)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878POLR3EENSG00000058600.1518.9339.1829.05ENCSR000AEF
HepG2POLR3EENSG00000058600.15210.5985.65148.12ENCSR985KAT
K562POLR3EENSG00000058600.1592.34100.3996.37ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for POLR3E is not avaliable on ENCORE database.



Proteins bound to RNA
  • POLR3E RNA is bound by 45 proteins.  







eCLIP assay for POLR3E is not avaliable on ENCORE database.





45 proteins are bound to POLR3E RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr162232838722328461+3'-UTR,5'-UTR,CDS,intron-Proximal6.5226435.12487K562SF3B4
chr162233703222337089+3'-UTR,CDS,intron-Proximal3.5857411.66296HepG2SF3A3
chr162234575822345880+3'-UTR3.006053.74888HepG2CSTF2
chr162233653722336586+3'-UTR,CDS3.105383.18660HepG2PABPN1
chr162233582522335836+3'-UTR,CDS4.263475.18972HepG2GRWD1
chr162232839722328441+3'-UTR,5'-UTR,CDS,intron-Proximal3.264409.46809HepG2SF3A3
chr162233714422337185+3'-UTR,CDS3.785805.20093K562DDX24
chr162233728122337355+3'-UTR,CDS4.0468718.22249HepG2PPIG
chr162233567522335735+3'-UTR,CDS,intron-Proximal3.194759.64262HepG2BCLAF1
chr162233655922336630+3'-UTR,CDS,intron-Proximal3.1484312.33522HepG2PPIG
chr162233702022337107+3'-UTR,CDS,intron-Proximal4.4954226.94192K562SF3B4
chr162233417222334238+3'-UTR,CDS4.9223111.94830K562DDX24
chr162233653122336595+3'-UTR,CDS,intron-Proximal3.182569.07205HepG2GRWD1
chr162233712822337270+3'-UTR,CDS3.3828410.22686HepG2GRWD1
chr162233590122335971+3'-UTR,CDS3.072006.98206HepG2PRPF4
chr162233658322336663+3'-UTR,CDS,intron-Proximal4.8431336.83603HepG2PRPF8
chr162234510522345144+3'-UTR3.002194.86633K562RBM15
chr162232539522325448+3'-UTR,5'-UTR,CDS,intron-Proximal3.218189.22286HepG2BUD13
chr162233418722334276+3'-UTR,CDS,intron-Proximal4.1843516.51596HepG2PRPF8
chr162233990322339937+3'-UTR,CDS,intron-Proximal3.539793.96535HepG2AQR
chr162233722922337324+3'-UTR,CDS3.3225910.30436HepG2SRSF1
chr162233713222337191+3'-UTR,CDS4.221603.70701HepG2PRPF4
chr162232535522325407+3'-UTR,5'-UTR,CDS,intron-Proximal3.324685.67192K562SF3B4
chr162232640722326441+3'-UTR,5'-UTR,CDS,intron-Proximal4.694135.82303K562BUD13
chr162233410122334179+3'-UTR,CDS,intron-Proximal4.573697.82456K562SF3B4
chr162233017522330256+3'-UTR,CDS4.594599.27525K562ZNF622
chr162232827322328358+3'-UTR,5'-UTR,CDS,intron-Proximal3.3784122.98318HepG2EFTUD2
chr162233654722336586+3'-UTR,CDS4.486246.36164K562DDX24
chr162232645922326489+3'-UTR,5'-UTR,CDS3.592963.29519HepG2UCHL5
chr162233981122339875+3'-UTR,CDS,intron-Proximal3.266334.38107K562AQR
chr162232640822326451+3'-UTR,5'-UTR,CDS,intron-Proximal6.1325410.14153K562DDX24
chr162233658322336626+3'-UTR,CDS,intron-Proximal5.7290510.68826HepG2AQR
chr162233732422337408+3'-UTR,CDS3.291275.37770HepG2SRSF1
chr162232832122328347+3'-UTR,5'-UTR,CDS3.4992011.97351HepG2PPIG
chr162233582422335882+3'-UTR,CDS3.379258.43531K562ZNF622
chr162233708622337179+3'-UTR,CDS3.604764.83478K562PUM1
chr162233713822337234+3'-UTR,CDS3.576825.17702K562SRSF1
chr162232833222328420+3'-UTR,5'-UTR,CDS,intron-Proximal3.7774513.26607HepG2PRPF8
chr162232543122325451+3'-UTR,5'-UTR,CDS,intron-Proximal4.642926.93329K562DDX24
chr162232645122326531+3'-UTR,5'-UTR,CDS,intron-Proximal5.7263612.19740K562DDX24
chr162233755922337625+3'-UTR,CDS,intron-Proximal3.8202211.69715HepG2PRPF8
chr162234518622345267+3'-UTR4.073353.73926K562RBM15
chr162233702422337140+3'-UTR,CDS,intron-Proximal3.6792511.36875K562BUD13
chr162231946622319547+3'-UTR,CDS,intron-Proximal4.6654721.98661K562DDX24
chr162233014622330266+3'-UTR,CDS,intron-Proximal4.3329915.78065K562DDX24
chr162233567422335734+3'-UTR,CDS,intron-Proximal3.208558.05533K562DDX24
chr162232837022328444+3'-UTR,5'-UTR,CDS,intron-Proximal4.1772931.83496HepG2SF3B4
chr162233582522335873+3'-UTR,CDS3.937084.06874HepG2UCHL5
chr162233580922335859+3'-UTR,CDS,intron-Proximal3.5584613.91201HepG2EFTUD2
chr162233728022337349+3'-UTR,CDS3.714704.76009HepG2PRPF4
chr162233658422336641+3'-UTR,CDS,intron-Proximal4.156595.99968K562PRPF8
chr162232800222328016+3'-UTR,5'-UTR,CDS,intron-Proximal3.8968418.81299HepG2PRPF8
chr162233656322336645+3'-UTR,CDS,intron-Proximal3.0981714.25439HepG2BUD13
chr162233416922334250+3'-UTR,CDS,intron-Proximal3.8049124.45362HepG2PPIG
chr162232792122327935+3'-UTR,5'-UTR,CDS,intron-Proximal5.468965.93845K562DDX24
chr162232074922320788+3'-UTR,CDS4.228486.28735K562DDX24
chr162232852622328544+3'-UTR,5'-UTR,CDS,intron-Proximal4.507567.79098HepG2PRPF8
chr162233658222336648+3'-UTR,CDS,intron-Proximal4.0125531.65492HepG2EFTUD2
chr162232830822328325+3'-UTR,5'-UTR,CDS,intron-Proximal4.732094.24111K562EFTUD2
chr162233736522337402+3'-UTR,CDS3.381334.48818HepG2GRWD1
chr162232645622326514+3'-UTR,5'-UTR,CDS3.2767717.83192HepG2PPIG
chr162232792122327964+3'-UTR,5'-UTR,CDS,intron-Proximal4.2051810.90751HepG2PPIG
chr162233567322335734+3'-UTR,CDS,intron-Proximal4.0114620.35447HepG2PPIG
chr162233743722337490+3'-UTR,CDS4.571164.15208K562RBM15
chr162233017922330248+3'-UTR,CDS3.343144.89070K562UCHL5
chr162232542422325473+3'-UTR,5'-UTR,CDS,intron-Proximal4.2885722.74734HepG2PRPF8
chr162233715022337208+3'-UTR,CDS3.274326.18983HepG2RBM15
chr162233987122339908+3'-UTR,CDS3.097643.90804HepG2GRWD1
chr162233598022335990+3'-UTR,CDS,intron-Proximal3.527567.85990HepG2PRPF8
chr162232018722320256+3'-UTR,CDS,intron-Distal,intron-Proximal3.786796.57821HepG2AQR
chr162232800622328041+3'-UTR,5'-UTR,CDS,intron-Proximal4.3701510.30697K562AQR
chr162233425022334300+3'-UTR,CDS,intron-Proximal3.847153.39008HepG2AQR
chr162233708422337121+3'-UTR,CDS3.946775.20093K562DDX24
chr162233701722337100+3'-UTR,CDS,intron-Proximal4.1214111.56965HepG2AQR
chr162233015122330187+3'-UTR,CDS3.088683.26275K562BUD13
chr162232824522328348+3'-UTR,5'-UTR,CDS,intron-Proximal4.205629.29543K562AQR
chr162233749022337546+3'-UTR,CDS4.793864.82934K562RBM15
chr162232648922326532+3'-UTR,5'-UTR,CDS,intron-Proximal3.944384.43797HepG2UCHL5
chr162232031322320404+3'-UTR,CDS,intron-Proximal3.8790820.01130HepG2PRPF8
chr162233713322337249+3'-UTR,CDS3.141075.59151HepG2SRSF9
chr162233979222339876+3'-UTR,CDS,intron-Proximal4.6846521.15984HepG2EFTUD2
chr162233587522335966+3'-UTR,CDS4.5555423.91264K562DDX24
chr162232027622320349+3'-UTR,CDS,intron-Proximal3.375664.76009HepG2PRPF4
chr162233728422337357+3'-UTR,CDS3.821407.45042K562UCHL5
chr162233702822337103+3'-UTR,CDS,intron-Proximal4.4795020.52365K562AQR
chr162233723422337333+3'-UTR,CDS4.881637.76645K562SRSF1
chr162232651422326531+3'-UTR,5'-UTR,CDS,intron-Proximal3.7471011.66833HepG2PPIG
chr162232800422328026+3'-UTR,5'-UTR,CDS,intron-Proximal3.816065.99700HepG2AQR
chr162233587322335965+3'-UTR,CDS4.9754410.34309HepG2UCHL5
chr162233588622335976+3'-UTR,CDS4.3783729.21209HepG2PPIG
chr162232651022326574+3'-UTR,5'-UTR,CDS,intron-Proximal4.5198228.74596HepG2PRPF8
chr162234340522343468+3'-UTR,CDS,intron-Distal,intron-Proximal3.300478.48025HepG2U2AF2
chr162233725822337412+3'-UTR,CDS3.193546.15187K562ZNF800
chr162232831722328361+3'-UTR,5'-UTR,CDS,intron-Proximal5.122018.66757K562DDX24
chr162233727922337365+3'-UTR,CDS3.165638.01908HepG2GRWD1
chr162233707822337122+3'-UTR,CDS,intron-Proximal3.0954810.96565HepG2PPIG
chr162232024422320280+3'-UTR,CDS,intron-Proximal5.3657411.60475K562DDX24
chr162233977322339838+3'-UTR,CDS,intron-Proximal4.083746.26407K562SF3B4
chr162234496122345023+3'-UTR,CDS,intron-Proximal3.152023.17639HepG2LSM11
chr162234509522345105+3'-UTR3.612694.22460K562RBM15
chr162233720822337254+3'-UTR,CDS4.688315.50697K562UCHL5
chr162233713522337269+3'-UTR,CDS3.0876221.17239HepG2PPIG
chr162232851422328526+3'-UTR,5'-UTR,CDS5.078284.17466K562DDX24
chr162233582222335840+3'-UTR,CDS,intron-Proximal3.7113211.11819HepG2PPIG
chr162232843422328459+3'-UTR,5'-UTR,CDS,intron-Proximal4.581616.28735K562DDX24
chr162233982222339874+3'-UTR,CDS,intron-Proximal4.8442018.91284HepG2AQR
chr162232839622328509+3'-UTR,5'-UTR,CDS,intron-Proximal3.415598.30660K562BUD13
chr162234552322345558+3'-UTR3.144083.04831K562RBM15
chr162233730322337402+3'-UTR,CDS3.155579.90630HepG2BCLAF1
chr162233658622336592+3'-UTR,CDS,intron-Proximal5.2372119.12979K562AQR
chr162233560022335699+3'-UTR,CDS,intron-Proximal5.753819.44792K562SF3B4
chr162232028022320358+3'-UTR,CDS,intron-Proximal4.2022513.82711K562DDX24
chr162232845922328506+3'-UTR,5'-UTR,CDS4.002289.86697K562DDX24
chr162233705222337114+3'-UTR,CDS,intron-Proximal4.1697425.87260HepG2SF3B4
chr162232833122328360+3'-UTR,5'-UTR,CDS3.264313.43213K562UCHL5
chr162234525922345329+3'-UTR3.645354.96777HepG2ZC3H11A
chr162233589222335980+3'-UTR,CDS3.2679313.92075HepG2GRWD1
chr162232534222325428+3'-UTR,5'-UTR,CDS,intron-Proximal4.1563613.42847HepG2EFTUD2
chr162232024422320280+3'-UTR,CDS,intron-Proximal3.1450413.53623HepG2PPIG
chr162234493022344997+3'-UTR,CDS,intron-Proximal5.249156.40247K562SF3B4
chr162232544522325493+3'-UTR,5'-UTR,CDS,intron-Proximal5.4047512.70303K562AQR
chr162232538122325422+3'-UTR,5'-UTR,CDS,intron-Proximal3.392345.81258K562AQR
chr162233745322337496+3'-UTR,CDS3.524763.57153HepG2RBM15
chr162233701622337121+3'-UTR,CDS,intron-Proximal3.4728821.50220HepG2BUD13
chr162233702322337120+3'-UTR,CDS,intron-Proximal4.1972932.87864HepG2EFTUD2
chr162231947122319545+3'-UTR,CDS,intron-Proximal3.323038.03770HepG2GRWD1
chr162233582322335875+3'-UTR,CDS,intron-Proximal3.718939.86075K562DDX24
chr162232082722320845+5'-UTR,CDS,intron-Proximal3.389998.04398K562AQR
chr162230875822308818+5'-UTR3.0425010.19648HepG2DDX3X
chr162232504722325056+5'-UTR,CDS,intron-Proximal4.086827.84250HepG2AQR
chr162230879922308857+5'-UTR3.202104.07771K562ZNF622
chr162232078822320833+5'-UTR,CDS,intron-Proximal4.4765710.65187K562DDX24
chr162231649622316517+5'-UTR,CDS,intron-Distal3.650774.42776HepG2BUD13
chr162231420722314283+5'-UTR,intron-Distal,intron-Proximal3.362417.47024HepG2AQR
chr162230881822308859+5'-UTR,intron-Proximal3.812793.42371HepG2DDX3X
chr162231427222314309+5'-UTR,CDS,intron-Distal3.450084.48818HepG2GRWD1
chr162231647622316507+5'-UTR,CDS,intron-Distal,intron-Proximal4.3913213.60405HepG2PPIG
chr162232494022324955+5'-UTR,CDS,intron-Proximal5.824218.32974K562DDX24
chr162230873822308823+5'-UTR3.466237.22071HepG2NCBP2
chr162232495522325007+5'-UTR,CDS,intron-Proximal4.7163415.20984K562DDX24
chr162230885622308900+5'-UTR,intron-Proximal3.123647.13280HepG2PRPF8
chr162231422222314288+5'-UTR,intron-Distal,intron-Proximal3.711088.84055HepG2BUD13
chr162231647622316529+5'-UTR,CDS,intron-Distal,intron-Proximal5.1542815.45094K562DDX24
chr162231650522316534+5'-UTR,CDS,intron-Distal,intron-Proximal4.589836.81564HepG2PRPF8
chr162231647622316522+5'-UTR,CDS,intron-Distal,intron-Proximal3.147554.50387HepG2AQR
chr162232503522325094+5'-UTR,CDS,intron-Proximal3.5526113.79463HepG2PRPF8
chr162230874822308799+5'-UTR3.827427.71102K562ZNF622
chr162231647522316519+5'-UTR,CDS,intron-Distal,intron-Proximal3.059404.56061K562BUD13
chr162232504722325065+5'-UTR,CDS,intron-Proximal3.936597.53394K562AQR
chr162230874122308854+5'-UTR4.5428212.01551HepG2SDAD1
chr162230874022308801+5'-UTR4.6869710.89272HepG2ZNF800
chr162232082322320871+5'-UTR,CDS,intron-Proximal5.7493325.03659HepG2PRPF8
chr162231424622314286+5'-UTR,intron-Distal,intron-Proximal4.593915.35746HepG2DDX3X
chr162231429422314325+CDS,intron-Distal4.622015.79396K562DDX24
chr162231430022314325+CDS,intron-Distal3.653367.10944HepG2PPIG
chr162231432222314356+CDS,intron-Distal,intron-Proximal4.456244.62947HepG2AQR
chr162233671722336772+intron-Distal3.183763.21151HepG2U2AF2
chr162233923522339295+intron-Distal3.466236.59715HepG2HNRNPK
chr162233769622337727+intron-Distal,intron-Proximal5.9198112.37853HepG2EFTUD2
chr162233829622338339+intron-Distal3.299247.39418HepG2EFTUD2
chr162232818522328303+intron-Distal,intron-Proximal3.049537.89029HepG2PRPF4
chr162233669822336736+intron-Distal3.674723.91320HepG2RBM15
chr162233396722334027+intron-Distal3.369254.38394K562DROSHA
chr162233481722334881+intron-Distal3.262574.09699HepG2HNRNPK
chr162233396022334038+intron-Distal3.760405.55601HepG2GTF2F1
chr162233857122338619+intron-Distal5.4201339.25235HepG2XPO5
chr162230901322309051+intron-Distal4.033546.20417HepG2BUD13
chr162233763822337719+intron-Distal,intron-Proximal3.5674610.72166HepG2CDC40
chr162232487222324925+intron-Distal,intron-Proximal5.456249.96618HepG2AQR
chr162233763222337706+intron-Distal,intron-Proximal3.993156.19396K562AKAP8L
chr162232820022328233+intron-Distal,intron-Proximal4.5756724.29860HepG2SF3B4
chr162233271422332760+intron-Distal4.669616.19745HepG2HNRNPM
chr162231119922311250+intron-Distal4.004263.64484HepG2HNRNPC
chr162233896622339026+intron-Distal5.3359629.28831HepG2XPO5
chr162233834322338369+intron-Distal3.355869.47595HepG2XPO5
chr162231941022319431+intron-Distal,intron-Proximal4.326243.95187HepG2AQR
chr162231939522319444+intron-Distal,intron-Proximal3.870989.88830HepG2SF3B4
chr162233175822331771+intron-Distal3.542544.19942HepG2HNRNPC
chr162233810322338164+intron-Distal3.4305113.58917HepG2XPO5
chr162231972822319843+intron-Distal4.323284.43116HepG2RBFOX2
chr162233472522334787+intron-Distal4.281408.35676HepG2HNRNPK
chr162233763522337724+intron-Distal,intron-Proximal4.7207313.13696K562EFTUD2
chr162234029622340396+intron-Distal3.379833.11609HepG2ILF3
chr162233764222337738+intron-Distal,intron-Proximal3.511366.95673HepG2GTF2F1
chr162233394322333989+intron-Distal3.822257.11537HepG2PRPF4
chr162232674922326786+intron-Distal4.580365.29549HepG2EFTUD2
chr162231456222314640+intron-Distal3.939993.41442HepG2HNRNPK
chr162233536522335423+intron-Distal5.151786.59160HepG2DGCR8
chr162233215922332267+intron-Distal3.787647.58130HepG2HNRNPM
chr162233763022337714+intron-Distal,intron-Proximal3.630549.07913K562BUD13
chr162231351422313595+intron-Distal3.704833.06084HepG2HNRNPK
chr162233610922336164+intron-Distal4.345629.29215HepG2EFTUD2
chr162233855722338571+intron-Distal7.7456865.55027HepG2XPO5
chr162232477122324882+intron-Distal,intron-Proximal4.519924.57154HepG2FAM120A
chr162234165922341708+intron-Distal4.205577.01244HepG2ILF3
chr162233668922336753+intron-Distal3.7395419.14489HepG2EFTUD2
chr162233398922334052+intron-Distal3.658078.33704HepG2PRPF4
chr162232819622328265+intron-Distal,intron-Proximal4.1617410.60725HepG2SF3A3
chr162233695422337020+intron-Distal,intron-Proximal3.194836.16954HepG2SF3B4
chr162232809622328157+intron-Distal,intron-Proximal5.0537717.46213HepG2RBFOX2
chr162231435222314372+intron-Distal,intron-Proximal3.864994.45914HepG2PRPF8
chr162232452322324590+intron-Distal3.507184.76009HepG2PRPF4
chr162233830722338374+intron-Distal4.030193.07008K562NONO
chr162232802922328143+intron-Distal,intron-Proximal5.3337320.76108HepG2EFTUD2
chr162231415322314207+intron-Distal,intron-Proximal3.337603.60559HepG2AQR
chr162233764622337707+intron-Distal,intron-Proximal3.834713.33043HepG2NCBP2
chr162233848522338522+intron-Distal4.9493147.47579HepG2XPO5
chr162233861922338673+intron-Distal4.4524631.26467HepG2XPO5
chr162233764122337703+intron-Distal,intron-Proximal3.660354.13833K562GTF2F1
chr162233763222337734+intron-Distal,intron-Proximal3.316494.45054HepG2PCBP2
chr162232510022325164+intron-Distal,intron-Proximal4.530823.89565K562PRPF8
chr162232819122328273+intron-Distal,intron-Proximal4.7165927.82232HepG2EFTUD2
chr162233763922337711+intron-Distal,intron-Proximal3.2977317.17151HepG2BUD13
chr162232478322324866+intron-Distal,intron-Proximal4.637505.59467HepG2PRPF4
chr162232805622328133+intron-Distal,intron-Proximal3.314583.91530HepG2PRPF4
chr162233545822335551+intron-Distal4.625065.63630HepG2DROSHA
chr162233829022338343+intron-Distal4.0249014.33444HepG2XPO5
chr162231455622314649+intron-Distal5.112108.19722HepG2PCBP2
chr162233693822337023+intron-Distal,intron-Proximal3.4693122.08327HepG2EFTUD2
chr162233396022334013+intron-Distal3.574464.76523HepG2SF3B4
chr162233763422337712+intron-Distal,intron-Proximal4.2964615.85890HepG2PRPF4
chr162233852222338557+intron-Distal6.72896400.00000HepG2XPO5
chr162231656222316596+intron-Distal,intron-Proximal3.667506.95612HepG2PRPF8
chr162233764022337705+intron-Distal,intron-Proximal5.089945.13952K562SF3B4
chr162232811322328158+intron-Distal3.426075.55128HepG2SF3B4
chr162233690222336957+intron-Distal3.496177.69474HepG2RBFOX2
chr162233673122336774+intron-Distal3.225323.76326HepG2RBFOX2
chr162233875822338809+intron-Distal3.253184.14686HepG2FKBP4
chr162233764022337696+intron-Proximal6.0924462.50299HepG2EFTUD2
chr162232802622328050+intron-Proximal4.478057.26476HepG2AQR
chr162232547322325500+intron-Proximal5.485995.68078HepG2AQR
chr162233760822337638+intron-Proximal3.929354.00320K562AQR
chr162232545622325489+intron-Proximal4.560766.88230HepG2BUD13
chr162232654122326612+intron-Proximal5.2381117.29805HepG2EFTUD2
chr162232089322320924+intron-Proximal5.524856.68817HepG2EFTUD2
chr162233698622337075+intron-Proximal3.256243.59099K562SMNDC1
chr162233760222337678+intron-Proximal4.235955.56912HepG2AQR
chr162232657422326602+intron-Proximal3.321565.13777HepG2PRPF8
chr162233991922339989+intron-Proximal3.9419410.54702HepG2EFTUD2
chr162233576622335804+intron-Proximal5.5447110.05439HepG2SF3B4
chr162232506522325089+intron-Proximal5.540079.41643K562AQR
chr162232803422328094+intron-Proximal3.743716.34623HepG2RBM22
chr162233427422334343+intron-Proximal5.1379616.97177HepG2EFTUD2
chr162232854422328567+intron-Proximal4.182569.68077HepG2PRPF8
chr162233991922339996+intron-Proximal3.400125.99889HepG2TIAL1
chr162233980822339822+intron-Proximal5.6778510.32702HepG2AQR
chr162232801622328039+intron-Proximal3.9724620.40896HepG2PRPF8
chr162232822022328313+intron-Proximal5.3706432.54456K562SF3B4
chr162232087722320926+intron-Proximal3.800456.79537K562AQR
chr162232805622328102+intron-Proximal3.350154.72062HepG2PRPF8
chr162232505622325085+intron-Proximal5.7649911.04988HepG2AQR
chr162233412122334152+intron-Proximal5.0949110.47516HepG2EFTUD2
chr162232803922328056+intron-Proximal3.4794712.21824HepG2PRPF8
chr162233764322337699+intron-Proximal4.196323.81265K562MTPAP
chr162233703122337052+intron-Proximal5.0841126.93149HepG2SF3B4
chr162232548822325512+intron-Proximal5.238115.24235HepG2EFTUD2
chr162233560422335662+intron-Proximal5.778639.50015HepG2SF3B4
chr162232067022320734+intron-Proximal4.1212212.32366HepG2SF3B4
chr162233659222336643+intron-Proximal4.281017.66928K562BUD13
chr162232823322328307+intron-Proximal4.7873736.11402HepG2SF3B4
chr162232547322325506+intron-Proximal5.0069517.79328HepG2PRPF8
chr162233763822337692+intron-Proximal3.6255012.77531K562AQR
chr162230885822308913+intron-Proximal4.892785.68078HepG2AQR
chr162232800722328059+intron-Proximal3.627143.88924K562PRPF8
chr162233409622334166+intron-Proximal3.081716.24257HepG2SF3B4
chr162233765222337692+intron-Proximal3.897005.20093K562DDX24
chr162232804122328063+intron-Proximal4.0567510.08968K562AQR
chr162233599022336022+intron-Proximal3.677249.09021HepG2PRPF8
chr162230886822308912+intron-Proximal3.842334.52312K562AQR
chr162232828022328315+intron-Proximal6.0617721.11883HepG2SF3A3
chr162231954622319585+intron-Proximal3.780036.65114HepG2PRPF8
chr162232826522328280+intron-Proximal5.7443413.54742HepG2SF3A3
chr162232545422325473+intron-Proximal5.320914.62947HepG2AQR
chr162233427622334347+intron-Proximal3.8521211.94608HepG2PRPF8
chr162233659222336652+intron-Proximal5.3457926.58915K562AQR
chr162232786322327915+intron-Proximal3.969066.37709K562EFTUD2
chr162233409322334171+intron-Proximal3.6831910.47466HepG2PRPF4
chr162232084522320877+intron-Proximal4.5788512.86643K562AQR
chr162232784722327913+intron-Proximal4.9605013.00415HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for POLR3E is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for POLR3E is not available on ENCORE database.

  • 70 RBPs can affect the levels of POLR3E.  








The Knockdown/knockout RNA-Seq assay for POLR3E is not available on ENCORE database.





70 RBPs can affect the gene expression of POLR3E :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
POLR3EENSG00000058600.111650.095902292.84250-0.474607.397106.50070HepG2ACO1
POLR3EENSG00000058600.111819.777102575.06260-0.500804.146103.51280HepG2AKAP1
POLR3EENSG00000058600.113004.965203686.60350-0.294903.738102.96210HepG2AUH
POLR3EENSG00000058600.111452.372501952.92180-0.427204.628603.05090HepG2BUD13
POLR3EENSG00000058600.111126.067701519.72020-0.432504.968503.97160HepG2CALR
POLR3EENSG00000058600.111640.641502188.16910-0.415506.559705.65000HepG2CELF1
POLR3EENSG00000058600.112627.333602352.780900.159101.959701.31970HepG2DAZAP1
POLR3EENSG00000058600.111028.084001478.74490-0.524405.792604.85090HepG2DDX21
POLR3EENSG00000058600.111020.629201563.59860-0.615405.590204.53620HepG2DDX55
POLR3EENSG00000058600.111629.764602193.62820-0.428707.675706.65530HepG2DKC1
POLR3EENSG00000058600.111223.216001679.19760-0.457104.039402.94760HepG2EEF2
POLR3EENSG00000058600.112300.149501694.272200.441005.044303.99480HepG2FUBP3
POLR3EENSG00000058600.111219.836401512.48940-0.310201.866601.33380HepG2GPKOW
POLR3EENSG00000058600.112352.849601958.832600.264303.129102.37020HepG2HNRNPF
POLR3EENSG00000058600.113824.910102134.192200.8416015.4421013.93030HepG2HNRNPK
POLR3EENSG00000058600.112288.091001928.878300.246302.030101.40360HepG2IGF2BP1
POLR3EENSG00000058600.112473.099202156.276100.197702.233301.67740HepG2PCBP1
POLR3EENSG00000058600.111684.260701424.335800.241702.303901.62440HepG2PPIL4
POLR3EENSG00000058600.11907.784501206.06810-0.409902.970402.13540HepG2PRPF8
POLR3EENSG00000058600.111697.069102194.11670-0.370605.993005.25040HepG2PTBP1
POLR3EENSG00000058600.111462.318802335.40840-0.6754020.4249019.02840HepG2PUS1
POLR3EENSG00000058600.113055.563302376.229100.362705.016904.21330HepG2QKI
POLR3EENSG00000058600.112719.540703537.93380-0.379506.568505.85150HepG2RBM22
POLR3EENSG00000058600.111937.101202441.82030-0.334105.073704.37750HepG2NELFE
POLR3EENSG00000058600.112531.929902110.330900.262701.900701.32240HepG2RPLP0
POLR3EENSG00000058600.111107.325401326.39490-0.260401.915501.39550HepG2RPS19
POLR3EENSG00000058600.111860.831502500.45680-0.426202.669601.88350HepG2RPS3A
POLR3EENSG00000058600.112111.642401422.141800.5702014.6706013.36320HepG2SAFB2
POLR3EENSG00000058600.112033.179201428.634100.509005.701204.71820HepG2SF3B1
POLR3EENSG00000058600.112869.424002284.313700.328905.417104.63650HepG2SF3B4
POLR3EENSG00000058600.112573.583902135.445000.269104.614703.74470HepG2SLBP
POLR3EENSG00000058600.111412.383601658.46510-0.231702.898902.24230HepG2SMN1
POLR3EENSG00000058600.113244.724603995.86730-0.300404.513103.91790HepG2SRFBP1
POLR3EENSG00000058600.111835.676202384.34730-0.377306.588805.93440HepG2SRSF1
POLR3EENSG00000058600.111722.900702198.92900-0.352005.358504.52910HepG2SRSF5
POLR3EENSG00000058600.112439.883301924.531800.342205.056004.15970HepG2SRSF7
POLR3EENSG00000058600.112190.812303469.18650-0.6631017.6862016.62670HepG2SSB
POLR3EENSG00000058600.111132.911101556.50300-0.458303.430902.68730HepG2SUPV3L1
POLR3EENSG00000058600.112322.555801969.250400.238002.073201.34680HepG2TIA1
POLR3EENSG00000058600.111910.803001565.585800.287403.792703.15480HepG2TRIM56
POLR3EENSG00000058600.111789.37000919.450000.9605014.5686012.86160HepG2UCHL5
POLR3EENSG00000058600.111854.573202310.75120-0.317305.110604.20710HepG2UPF1
POLR3EENSG00000058600.113392.821302230.937700.6047014.9403013.71580HepG2UTP3
POLR3EENSG00000058600.111177.466801918.85530-0.7046020.8698019.34030HepG2ZC3H8
POLR3EENSG00000058600.112125.919202541.38240-0.257504.446703.79590HepG2ZNF622
POLR3EENSG00000058600.111966.781001471.122300.418802.559501.31730HepG2ZRANB2
POLR3EENSG00000058600.112143.037002767.60030-0.369004.520503.82730K562AGGF1
POLR3EENSG00000058600.112420.376303041.12830-0.329403.052602.00660K562AKAP8
POLR3EENSG00000058600.112501.557803357.42080-0.424504.717803.98870K562AQR
POLR3EENSG00000058600.112606.194603021.58430-0.213402.147001.34910K562ATP5C1
POLR3EENSG00000058600.11963.335801290.62720-0.422003.390302.42410K562BOP1
POLR3EENSG00000058600.112463.142003307.47100-0.425206.058304.28440K562CCDC124
POLR3EENSG00000058600.111360.232701118.905500.281702.429701.68210K562EIF3G
POLR3EENSG00000058600.111726.963801437.612000.264502.503701.42470K562EIF4B
POLR3EENSG00000058600.111047.436201396.35440-0.414803.486202.52270K562FMR1
POLR3EENSG00000058600.11875.354901183.59540-0.435203.261302.26130K562FTO
POLR3EENSG00000058600.112099.013301660.212000.338204.355503.62030K562FXR1
POLR3EENSG00000058600.111419.075101699.71220-0.260302.070401.54360K562HNRNPC
POLR3EENSG00000058600.112337.408303056.22960-0.386804.518503.42470K562KIF1C
POLR3EENSG00000058600.112378.860202925.53160-0.298402.669401.61730K562MAK16
POLR3EENSG00000058600.112791.664503423.74360-0.294402.588601.71430K562MBNL1
POLR3EENSG00000058600.111298.921701594.22410-0.295502.767701.53810K562NCBP2
POLR3EENSG00000058600.111847.965701357.401700.445002.673601.71100K562PCBP2
POLR3EENSG00000058600.111817.235802387.24320-0.393603.087302.20730K562PCBP3
POLR3EENSG00000058600.111454.965301831.14510-0.331803.487902.58180K562POLR2G
POLR3EENSG00000058600.113811.385904744.84150-0.316003.842802.56410K562PUM1
POLR3EENSG00000058600.113630.353304649.01670-0.356806.023304.58850K562PUM2
POLR3EENSG00000058600.111895.379202856.05490-0.591507.588106.73460K562PUS1
POLR3EENSG00000058600.112001.618802782.72780-0.475308.021407.04290K562RBM15
POLR3EENSG00000058600.111259.281601634.56260-0.376302.769301.95280K562RPS19
POLR3EENSG00000058600.111474.054801111.621500.407004.714303.58710K562SF3B4
POLR3EENSG00000058600.111810.788501418.746000.351902.498501.72630K562TIA1
POLR3EENSG00000058600.112676.290703256.68000-0.283204.285802.70280K562TROVE2
POLR3EENSG00000058600.111313.804801070.149800.295802.615201.83390K562U2AF2
POLR3EENSG00000058600.112236.867202783.48560-0.315405.214904.26250K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for POLR3E is not available on ENCORE database.





5 RBPs can affect the splicing of POLR3E :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPOLR3EENSG00000058600.11chr16+223398302233990822337081223375992234496422345346-0.243000.002230.05777excludedK562AKAP8L
SEPOLR3EENSG00000058600.11chr16+2233799122338049223370812233759922339830223399080.097000.000200.00317includedK562AQR
SEPOLR3EENSG00000058600.11chr16+2233673922336969223365252233658722337081223375990.066000.000450.00879includedK562PUS1
SEPOLR3EENSG00000058600.11chr16+223433802234350622337081223375992234496422345017-0.054000.000270.00571excludedK562PUS1
SEPOLR3EENSG00000058600.11chr16+2233799122338022223370812233759922339830223399080.082000.000340.01859includedHepG2MATR3
SEPOLR3EENSG00000058600.11chr16+223398302233990822337081223375992234496422345346-0.285000.001630.03959excludedK562RBM15
A3SSPOLR3EENSG00000058600.11chr16+2231423122314325223142512231432522308731223088580.124000.000130.00112longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for POLR3E is not avaliable on ENCORE database.