MGAT1

General Information

Gene Name       : MGAT1
Gene ID             : ENSG00000131446.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MGAT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MGAT1ENSG00000131446.1620.4225.9323.18ENCSR000AEF
HepG2MGAT1ENSG00000131446.1651.6930.0840.88ENCSR985KAT
K562MGAT1ENSG00000131446.1636.5429.9533.24ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MGAT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MGAT1 RNA is bound by 28 proteins.  







eCLIP assay for MGAT1 is not avaliable on ENCORE database.





28 proteins are bound to MGAT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5180218371180218456-3'-UTR,intron-Distal,intron-Proximal3.9329211.35136HepG2LARP4
chr5180218062180218180-3'-UTR,intron-Distal6.5815423.84245HepG2UPF1
chr5180218317180218404-3'-UTR,intron-Distal,intron-Proximal3.985728.99604K562UPF1
chr5180220028180220079-3'-UTR,intron-Distal,intron-Proximal3.7352113.90623HepG2RPS3
chr5180217747180217816-3'-UTR,intron-Distal5.5301911.59236HepG2AKAP1
chr5180218110180218169-3'-UTR,intron-Distal4.690139.43510K562UPF1
chr5180218574180218629-3'-UTR,intron-Distal3.099816.16969HepG2LARP4
chr5180218054180218178-3'-UTR,intron-Distal3.423234.25529HepG2STAU2
chr5180217943180218042-3'-UTR,intron-Distal6.3249222.03396HepG2UPF1
chr5180218193180218243-3'-UTR,intron-Distal4.975536.26929K562YBX3
chr5180217679180217747-3'-UTR,intron-Distal5.309919.71345HepG2AKAP1
chr5180218211180218314-3'-UTR,intron-Distal4.619258.23922HepG2AKAP1
chr5180217600180217624-3'-UTR,intron-Distal3.473183.42164K562UPF1
chr5180218470180218516-3'-UTR,intron-Distal,intron-Proximal3.501834.91603HepG2LIN28B
chr5180218589180218628-3'-UTR,intron-Distal4.782407.21030HepG2UPF1
chr5180219962180220016-3'-UTR,CDS,intron-Distal,intron-Proximal5.5567932.96956HepG2DDX3X
chr5180218314180218468-3'-UTR,intron-Distal,intron-Proximal6.1810734.91340HepG2UPF1
chr5180217943180218012-3'-UTR,intron-Distal5.163896.99975K562UPF1
chr5180217587180217625-3'-UTR,intron-Distal4.264334.78280HepG2AKAP1
chr5180218569180218611-3'-UTR,intron-Distal3.039805.12216HepG2DDX55
chr5180218046180218104-3'-UTR,intron-Distal4.871037.48708HepG2AKAP1
chr5180220016180220070-3'-UTR,intron-Distal,intron-Proximal5.0645836.74100HepG2DDX3X
chr5180218332180218448-3'-UTR,intron-Distal,intron-Proximal5.9485214.73409HepG2AKAP1
chr5180217816180217882-3'-UTR,intron-Distal3.680498.17514HepG2AKAP1
chr5180220070180220098-3'-UTR,intron-Distal3.8304522.25719HepG2DDX3X
chr5180217818180217904-3'-UTR,intron-Distal4.8287214.22041HepG2UPF1
chr5180218229180218314-3'-UTR,intron-Distal4.7550213.05553HepG2UPF1
chr5180217681180217818-3'-UTR,intron-Distal5.7912230.75606HepG2UPF1
chr5180218104180218174-3'-UTR,intron-Distal3.435098.46839HepG2AKAP1
chr5180219957180220007-3'-UTR,CDS,intron-Distal,intron-Proximal4.688095.51254HepG2RPS3
chr5180237093180237153-5'-UTR,intron-Distal,intron-Proximal4.360657.48569K562GTF2F1
chr5180237040180237116-5'-UTR,intron-Distal4.317476.42503K562DDX3X
chr5180237076180237156-5'-UTR,intron-Distal,intron-Proximal5.2650210.04448HepG2FAM120A
chr5180235589180235758-5'-UTR,intron-Distal,intron-Proximal3.198326.12136HepG2BUD13
chr5180236688180236756-5'-UTR,intron-Distal4.764376.97401HepG2GTF2F1
chr5180236678180236750-5'-UTR,intron-Distal3.296777.95018K562CSTF2T
chr5180229678180229708-5'-UTR,intron-Distal3.589147.76281HepG2DDX3X
chr5180229792180229837-5'-UTR,intron-Distal,intron-Proximal3.798217.12467HepG2DDX3X
chr5180237048180237124-5'-UTR,intron-Distal4.9677113.15062HepG2DDX3X
chr5180237067180237175-5'-UTR,intron-Distal,intron-Proximal4.137288.18214HepG2PRPF4
chr5180237058180237149-5'-UTR,intron-Distal,intron-Proximal4.284853.58513HepG2GTF2F1
chr5180229708180229773-5'-UTR,intron-Distal,intron-Proximal4.0089519.68567HepG2DDX3X
chr5180237086180237142-5'-UTR,intron-Distal,intron-Proximal4.395794.61649HepG2CSTF2T
chr5180236681180236778-5'-UTR,intron-Distal4.917664.51142K562DDX6
chr5180236694180236747-5'-UTR,intron-Distal3.583274.50569K562GTF2F1
chr5180236759180236827-5'-UTR,intron-Distal4.113713.76686K562IGF2BP1
chr5180237091180237151-5'-UTR,intron-Distal,intron-Proximal3.923347.13178K562CSTF2T
chr5180235753180235801-5'-UTR,intron-Distal,intron-Proximal3.230115.06399K562DDX3X
chr5180236696180236820-5'-UTR,intron-Distal7.0271918.42588K562EIF4G2
chr5180235898180236074-5'-UTR,intron-Distal,intron-Proximal5.1491618.52154K562DDX3X
chr5180236767180236830-5'-UTR,intron-Distal,intron-Proximal5.7046315.08356K562TARDBP
chr5180236700180236784-5'-UTR,intron-Distal3.927976.23254HepG2PRPF4
chr5180236698180236744-5'-UTR,intron-Distal4.510184.07810K562UPF1
chr5180219118180219203-CDS,intron-Distal3.724769.56700HepG2SND1
chr5180219327180219372-CDS,intron-Distal,intron-Proximal3.536354.80676K562RBM15
chr5180218995180219028-CDS,intron-Distal3.104193.72739HepG2SND1
chr5180218670180218713-CDS,intron-Distal4.450213.67707K562METAP2
chr5180218862180218898-CDS,intron-Distal3.897756.30673HepG2DDX3X
chr5180218654180218723-CDS,intron-Distal3.822187.20687HepG2YBX3
chr5180219603180219717-CDS,intron-Distal,intron-Proximal3.7705619.96750HepG2DDX3X
chr5180218786180218825-CDS,intron-Distal4.255844.22893K562RBM15
chr5180218905180218962-CDS,intron-Distal5.174167.23707K562RBM15
chr5180219140180219186-CDS,intron-Distal4.392473.35417K562METAP2
chr5180218861180218935-CDS,intron-Distal5.461235.82558K562PCBP1
chr5180218857180218905-CDS,intron-Distal5.472648.98006K562RBM15
chr5180219496180219556-CDS,intron-Distal,intron-Proximal3.220545.70746HepG2SND1
chr5180219052180219118-CDS,intron-Distal3.180023.56301HepG2SND1
chr5180218651180218715-CDS,intron-Distal4.8486113.37425K562YBX3
chr5180218800180218832-CDS,intron-Distal4.214223.72779HepG2LARP4
chr5180219845180219899-CDS,intron-Distal,intron-Proximal3.5858118.64327HepG2DDX3X
chr5180219114180219184-CDS,intron-Distal4.8788312.81213K562RBM15
chr5180219803180219845-CDS,intron-Distal,intron-Proximal4.243338.30191HepG2DDX3X
chr5180220109180220199-intron-Distal5.935968.66363HepG2SF3A3
chr5180236940180236996-intron-Distal,intron-Proximal4.393094.94603K562CSTF2T
chr5180225398180225490-intron-Distal5.088887.14250K562HNRNPM
chr5180226936180227074-intron-Distal3.149503.61097K562ILF3
chr5180225508180225575-intron-Distal4.022753.53404K562HNRNPM
chr5180229584180229674-intron-Distal3.680898.84510HepG2CSTF2T
chr5180229291180229374-intron-Distal3.241253.74491K562CSTF2T
chr5180224362180224413-intron-Distal3.859653.15106HepG2HNRNPC
chr5180226127180226169-intron-Distal4.352893.86368HepG2HNRNPM
chr5180236209180236262-intron-Distal3.688365.90050K562TARDBP
chr5180236919180237000-intron-Distal,intron-Proximal3.816843.29554HepG2GTF2F1
chr5180236940180237006-intron-Distal,intron-Proximal3.279523.72699HepG2PRPF4
chr5180236934180237018-intron-Distal,intron-Proximal4.306565.11753HepG2CSTF2T
chr5180234246180234301-intron-Distal4.091594.10336HepG2SUGP2
chr5180225396180225489-intron-Distal5.169619.14097HepG2HNRNPM
chr5180229989180230066-intron-Distal3.199436.37066HepG2NKRF
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MGAT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MGAT1 is not available on ENCORE database.

  • 93 RBPs can affect the levels of MGAT1.  








The Knockdown/knockout RNA-Seq assay for MGAT1 is not available on ENCORE database.





93 RBPs can affect the gene expression of MGAT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MGAT1ENSG00000131446.112032.737902900.13630-0.512704.398003.74810HepG2AKAP1
MGAT1ENSG00000131446.111662.864002399.52050-0.529105.353804.27880HepG2ASCC1
MGAT1ENSG00000131446.111602.49680921.523400.798105.212904.42320HepG2BOP1
MGAT1ENSG00000131446.112838.041102279.741600.315902.370201.64980HepG2CIRBP
MGAT1ENSG00000131446.111745.948202104.59400-0.269504.165903.38220HepG2CKAP4
MGAT1ENSG00000131446.111238.02290845.973200.549302.517701.85630HepG2CPSF6
MGAT1ENSG00000131446.111289.694701069.358100.270202.437601.48510HepG2YBX3
MGAT1ENSG00000131446.11874.697901249.22170-0.514203.017101.58040HepG2CSTF2T
MGAT1ENSG00000131446.112103.312801758.879900.257903.007202.34170HepG2CELF1
MGAT1ENSG00000131446.111018.193001891.14480-0.8932032.1695030.18020HepG2DAZAP1
MGAT1ENSG00000131446.111490.714001946.80630-0.385107.179605.94330HepG2DDX19B
MGAT1ENSG00000131446.111072.256801316.66210-0.296202.293801.47070HepG2DDX24
MGAT1ENSG00000131446.113825.638902777.899200.461604.367803.59580HepG2DDX3X
MGAT1ENSG00000131446.11849.589001278.38800-0.589502.958802.16360HepG2DDX55
MGAT1ENSG00000131446.112982.110302386.772000.321202.043501.50570HepG2DDX6
MGAT1ENSG00000131446.111273.534801012.733700.330502.574001.62760HepG2DHX30
MGAT1ENSG00000131446.111480.486601049.999100.495605.189104.25500HepG2DNAJC21
MGAT1ENSG00000131446.111520.979801040.771500.5472012.4978011.21730HepG2DNAJC2
MGAT1ENSG00000131446.112872.788602293.966500.324502.385401.83320HepG2EIF2S1
MGAT1ENSG00000131446.11856.381301162.07670-0.440403.410902.41300HepG2EIF3D
MGAT1ENSG00000131446.111906.769702468.50220-0.372502.085701.48440HepG2EIF4B
MGAT1ENSG00000131446.111264.150501865.80190-0.5616011.100509.64290HepG2EIF4G1
MGAT1ENSG00000131446.111338.028202006.15850-0.584308.164706.84890HepG2FUBP3
MGAT1ENSG00000131446.111724.123802372.81280-0.460703.903203.11970HepG2G3BP1
MGAT1ENSG00000131446.111585.16470958.879300.725107.655006.62390HepG2GPKOW
MGAT1ENSG00000131446.111344.479401738.05620-0.370405.083703.88100HepG2HNRNPA2B1
MGAT1ENSG00000131446.111541.391201179.134200.386403.430602.66430HepG2HNRNPC
MGAT1ENSG00000131446.111855.143501394.685400.411506.551805.51270HepG2HNRNPF
MGAT1ENSG00000131446.111934.377302403.57850-0.313302.526601.85750HepG2HNRNPK
MGAT1ENSG00000131446.112153.427201722.663000.321905.876004.92500HepG2HNRNPL
MGAT1ENSG00000131446.111198.365201477.80720-0.302402.377001.49480HepG2HNRNPM
MGAT1ENSG00000131446.11965.468201171.33740-0.278902.873002.25620HepG2HNRNPU
MGAT1ENSG00000131446.111866.321801373.366100.442405.580304.58970HepG2IGF2BP1
MGAT1ENSG00000131446.111415.558702573.39750-0.8623011.2803010.06980HepG2MATR3
MGAT1ENSG00000131446.112443.079801875.259700.381503.966603.05320HepG2NOL12
MGAT1ENSG00000131446.112126.166401279.645600.732404.794603.60140HepG2PABPC1
MGAT1ENSG00000131446.111260.503902345.23660-0.8957013.1018011.55640HepG2PABPC4
MGAT1ENSG00000131446.111518.985401044.736800.539908.715307.45520HepG2PPIL4
MGAT1ENSG00000131446.11979.083501300.32880-0.409405.686004.61870HepG2PRPF4
MGAT1ENSG00000131446.11501.25000985.53930-0.975406.156005.00240HepG2PRPF8
MGAT1ENSG00000131446.111896.264802408.84830-0.345205.852005.11580HepG2PTBP1
MGAT1ENSG00000131446.112297.813801790.122500.360103.685603.00880HepG2PUF60
MGAT1ENSG00000131446.112446.732301898.916100.365604.558503.70880HepG2PUM2
MGAT1ENSG00000131446.111701.384902608.88710-0.6167012.3635011.18180HepG2QKI
MGAT1ENSG00000131446.111780.447302339.34310-0.393905.798805.11760HepG2RBM22
MGAT1ENSG00000131446.111916.977202680.83440-0.4838010.112809.19950HepG2NELFE
MGAT1ENSG00000131446.111894.632602496.80110-0.398207.266906.33880HepG2RECQL
MGAT1ENSG00000131446.11862.880901130.85000-0.390203.450502.77280HepG2RPS19
MGAT1ENSG00000131446.111326.61330905.697300.550504.156703.30800HepG2SF3B1
MGAT1ENSG00000131446.111966.584602507.95980-0.350805.900205.09190HepG2SF3B4
MGAT1ENSG00000131446.112145.812601716.503400.322005.816904.86210HepG2SLBP
MGAT1ENSG00000131446.111934.464601320.045700.551203.597502.49140HepG2SMNDC1
MGAT1ENSG00000131446.112016.095602617.75160-0.376807.132306.45630HepG2SRSF1
MGAT1ENSG00000131446.111900.823301370.235000.472108.648907.53510HepG2SRSF7
MGAT1ENSG00000131446.111703.374002129.66710-0.322205.141404.43090HepG2SRSF9
MGAT1ENSG00000131446.112579.326202293.995600.169001.757601.32570HepG2SSB
MGAT1ENSG00000131446.111920.454301446.134800.409104.132002.99470HepG2SUPT6H
MGAT1ENSG00000131446.11764.755901272.43170-0.734503.968803.18110HepG2SUPV3L1
MGAT1ENSG00000131446.111032.134402352.89440-1.1888041.9442040.09930HepG2TAF15
MGAT1ENSG00000131446.111270.94690892.182200.510404.110703.24870HepG2TARDBP
MGAT1ENSG00000131446.111670.683502162.03490-0.372004.244003.21710HepG2TIA1
MGAT1ENSG00000131446.111935.193201148.351100.7528020.9566019.58830HepG2TRIM56
MGAT1ENSG00000131446.112164.851301892.226400.194102.180501.54820HepG2UPF1
MGAT1ENSG00000131446.111761.235901259.753700.483303.112101.94140HepG2XPO5
MGAT1ENSG00000131446.11860.841001421.32870-0.723403.727002.49290HepG2XRCC6
MGAT1ENSG00000131446.111649.161201283.304500.361802.062001.46920HepG2ZC3H8
MGAT1ENSG00000131446.112750.137802081.090500.4021010.113209.23200HepG2ZNF622
MGAT1ENSG00000131446.111702.612101343.002200.342202.966101.93880K562AKAP8
MGAT1ENSG00000131446.112954.508601834.744900.6872010.742709.69940K562AQR
MGAT1ENSG00000131446.111160.06920913.610000.344503.021802.02090K562BCLAF1
MGAT1ENSG00000131446.11981.01460525.042300.901703.928102.88670K562BOP1
MGAT1ENSG00000131446.111533.970701108.332800.468802.323601.36670K562CNOT7
MGAT1ENSG00000131446.111646.863701336.770700.300903.516002.26150K562CPEB4
MGAT1ENSG00000131446.11944.44770558.271300.7584010.181008.66350K562CPSF6
MGAT1ENSG00000131446.111296.94170920.858100.494003.938602.66530K562DDX3X
MGAT1ENSG00000131446.111190.51040933.610500.350603.568102.03200K562DDX6
MGAT1ENSG00000131446.111089.92530800.925500.444403.489902.45840K562EFTUD2
MGAT1ENSG00000131446.111979.886001356.410300.5455010.059608.81970K562EIF2S2
MGAT1ENSG00000131446.111315.01470857.474400.616805.247003.76520K562EIF3D
MGAT1ENSG00000131446.111261.41260962.041000.390803.318902.42470K562EIF4A3
MGAT1ENSG00000131446.111065.13250866.342900.297902.591901.48700K562EIF4B
MGAT1ENSG00000131446.112225.906101849.847600.266902.727401.79570K562EIF4G2
MGAT1ENSG00000131446.111275.95500950.548700.424603.852102.84110K562FIP1L1
MGAT1ENSG00000131446.11460.68910661.19090-0.521303.563902.26240K562FKBP4
MGAT1ENSG00000131446.11807.09570568.026400.506704.035802.99870K562FMR1
MGAT1ENSG00000131446.11710.49690481.453000.561304.261503.10440K562FTO
MGAT1ENSG00000131446.111260.492701000.477200.333203.469602.80340K562FXR1
MGAT1ENSG00000131446.11293.48650528.89980-0.849706.167105.01920K562G3BP2
MGAT1ENSG00000131446.11952.72310533.012300.837805.881204.72750K562GPKOW
MGAT1ENSG00000131446.112762.352801807.477900.611809.744008.30170K562GRSF1
MGAT1ENSG00000131446.11978.58680761.149300.362402.750502.15540K562HNRNPC
MGAT1ENSG00000131446.111081.55940781.934400.467903.453402.40330K562HNRNPM
MGAT1ENSG00000131446.111648.039501288.609700.354802.742101.95070K562HSPD1
MGAT1ENSG00000131446.111173.04610935.753400.326002.591601.77680K562MAGOH
MGAT1ENSG00000131446.11826.40490520.279200.667506.992005.56730K562METAP2
MGAT1ENSG00000131446.111480.073001231.441600.265202.474501.70890K562MTPAP
MGAT1ENSG00000131446.111082.60420789.353800.455703.039601.66550K562NONO
MGAT1ENSG00000131446.111649.840501079.197100.612307.453305.96660K562PPIG
MGAT1ENSG00000131446.11984.80850779.394600.337402.091901.43550K562PRPF8
MGAT1ENSG00000131446.111253.29620909.158400.463005.114004.23390K562PTBP1
MGAT1ENSG00000131446.112469.019302018.275600.290702.279201.53930K562PUF60
MGAT1ENSG00000131446.112590.733302103.378800.300603.414702.34670K562PUM2
MGAT1ENSG00000131446.111077.30430871.661700.305502.097601.37050K562RBM22
MGAT1ENSG00000131446.111808.790601350.117700.421806.131004.95610K562SF3A3
MGAT1ENSG00000131446.11739.03840549.938100.426303.729202.73180K562SF3B4
MGAT1ENSG00000131446.11793.37720590.399600.426203.107602.00640K562SRFBP1
MGAT1ENSG00000131446.11847.79370642.063300.400902.995401.88850K562SRSF4
MGAT1ENSG00000131446.111183.21020870.099200.443404.529503.44500K562TIA1
MGAT1ENSG00000131446.11929.93560697.514800.414803.257102.21140K562TRIM56
MGAT1ENSG00000131446.112116.474701450.753000.5448012.2271010.85080K562UPF1
MGAT1ENSG00000131446.111113.29400813.295600.452903.532802.10550K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MGAT1 is not available on ENCORE database.





1 RBPs can affect the splicing of MGAT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMGAT1ENSG00000131446.11chr5-1802226551802228751802198691802200971802296791802298030.357000.001250.03230includedK562RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MGAT1 is not avaliable on ENCORE database.