LPIN3

General Information

Gene Name       : LPIN3
Gene ID             : ENSG00000132793.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LPIN3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LPIN3ENSG00000132793.110.110.360.23ENCSR000AEF
HepG2LPIN3ENSG00000132793.1118.8712.6815.78ENCSR985KAT
K562LPIN3ENSG00000132793.115.736.135.93ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LPIN3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LPIN3 RNA is bound by 18 proteins.  







eCLIP assay for LPIN3 is not avaliable on ENCORE database.





18 proteins are bound to LPIN3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr203998813939988197+3'-UTR4.040829.96241HepG2LSM11
chr203998866839988780+3'-UTR4.1579020.31343HepG2PABPN1
chr203998869239988791+3'-UTR4.1110612.40221HepG2LSM11
chr203998888839988974+3'-UTR3.085177.60316HepG2ZC3H11A
chr203998889939988963+3'-UTR3.958679.74915HepG2PABPN1
chr203998845039988530+3'-UTR4.433059.30176HepG2PABPN1
chr203998889139988971+3'-UTR3.400757.20541HepG2LSM11
chr203998778539987796+3'-UTR4.642593.44763HepG2LSM11
chr203998767339987719+3'-UTR3.572885.25133HepG2LSM11
chr203998745839987544+3'-UTR,CDS,polyA_site4.026247.27033HepG2PABPN1
chr203998758739987644+3'-UTR3.521754.38675HepG2LSM11
chr203998778339987847+3'-UTR3.422764.71726HepG2HNRNPC
chr203998838639988416+3'-UTR3.490794.51483HepG2PABPN1
chr203998899039989087+3'-UTR3.008794.78286HepG2ZC3H11A
chr203998809139988139+3'-UTR5.4138011.38041HepG2LSM11
chr203997869439978707+CDS,intron-Proximal4.221196.92541HepG2PPIG
chr203998608439986131+CDS,intron-Proximal4.373836.71940K562PRPF8
chr203998345939983504+CDS,intron-Proximal3.376175.86480HepG2PPIG
chr203998592039986007+CDS,intron-Proximal4.8119110.52912K562SF3B4
chr203998693639986990+CDS4.4745611.27084HepG2PPIG
chr203998568239985712+CDS3.372823.71797HepG2BCLAF1
chr203998600039986050+CDS,intron-Proximal3.627603.29519HepG2UCHL5
chr203998695339986987+CDS3.117964.12887HepG2GRWD1
chr203998069839980765+CDS,intron-Proximal3.089064.02671HepG2UCHL5
chr203998067739980744+CDS,intron-Proximal4.592014.76200K562BUD13
chr203998346039983503+CDS3.400533.73423K562UCHL5
chr203997725939977305+CDS3.564887.87154HepG2PPIG
chr203997899939979033+CDS4.311747.79455HepG2PPIG
chr203998601739986057+CDS3.031733.53125K562DDX24
chr203997747239977534+CDS,intron-Proximal3.281938.77086HepG2BCLAF1
chr203998145239981489+CDS3.376634.26492HepG2BCLAF1
chr203998607839986091+CDS,intron-Proximal5.7184029.31600HepG2PRPF8
chr203997740939977529+CDS,intron-Proximal4.2704014.82991HepG2PPIG
chr203998069939980776+CDS,intron-Proximal4.7949213.35495HepG2PPIG
chr203997844439978481+CDS3.021674.17822HepG2PPIG
chr203997621839976237+CDS4.147445.52342HepG2PPIG
chr203998737939987426+CDS3.074933.11596HepG2GRWD1
chr203998600039986052+CDS,intron-Proximal4.107414.08576HepG2U2AF1
chr203998585539986038+CDS,intron-Proximal3.2568011.71188HepG2PRPF4
chr203998736939987406+CDS4.370295.05521HepG2PABPN1
chr203998069439980760+CDS,intron-Proximal3.290978.70997HepG2BUD13
chr203997777339977812+CDS3.902229.02617HepG2PPIG
chr203998346139983488+CDS3.611054.48818HepG2GRWD1
chr203998710939987178+CDS3.523496.27353HepG2GRWD1
chr203998085539980924+CDS,intron-Proximal4.0048111.87912HepG2PRPF8
chr203998592539986010+CDS,intron-Proximal3.1033216.45649HepG2PRPF8
chr203998334239983378+CDS,intron-Distal,intron-Proximal3.160685.82842HepG2PPIG
chr203997841339978424+CDS,intron-Proximal4.278406.64430HepG2PPIG
chr203998582739985883+CDS,intron-Proximal3.9454019.11264HepG2PRPF8
chr203998567739985708+CDS,intron-Proximal3.261604.12887HepG2GRWD1
chr203997850739978532+CDS3.112975.54641HepG2PPIG
chr203998121039981269+CDS,intron-Proximal3.618607.22920K562AQR
chr203998092439981034+intron-Distal,intron-Proximal3.352167.07647K562PRPF8
chr203998615339986218+intron-Distal,intron-Proximal4.8654827.36706HepG2EFTUD2
chr203998093839981013+intron-Distal,intron-Proximal5.454497.28100K562EFTUD2
chr203998624239986309+intron-Distal3.492655.32184HepG2PRPF4
chr203998609039986190+intron-Distal,intron-Proximal3.233435.07297K562BUD13
chr203998091139980995+intron-Distal,intron-Proximal3.401643.91614K562BUD13
chr203998094639981022+intron-Distal,intron-Proximal4.8344316.46266HepG2EFTUD2
chr203998092139981006+intron-Distal,intron-Proximal5.9845612.64691K562AQR
chr203998670339986735+intron-Distal,intron-Proximal3.157435.97015HepG2EFTUD2
chr203998618839986259+intron-Distal3.160956.33298HepG2SF3B4
chr203998618739986254+intron-Distal3.930434.22551K562SF3B4
chr203997818439978236+intron-Distal3.872343.09122HepG2PTBP1
chr203998588539985927+intron-Proximal3.031186.49271HepG2GRWD1
chr203998609239986153+intron-Proximal4.3683827.28112HepG2EFTUD2
chr203998086039980921+intron-Proximal5.616079.41643K562AQR
chr203998648039986515+intron-Proximal5.238166.27794HepG2SF3A3
chr203998588339985925+intron-Proximal3.2871515.12492HepG2PRPF8
chr203998586839985931+intron-Proximal3.542727.39410K562BUD13
chr203998592739985978+intron-Proximal3.593087.31809HepG2GRWD1
chr203998646039986497+intron-Proximal4.958807.05392HepG2SF3B4
chr203998586839985925+intron-Proximal4.7492431.28275HepG2EFTUD2
chr203998678639986828+intron-Proximal5.989418.30797HepG2SF3A3
chr203998591339985973+intron-Proximal4.669166.81381K562DDX24
chr203998592539985999+intron-Proximal4.2936339.65962HepG2EFTUD2
chr203998056039980617+intron-Proximal4.601968.44604HepG2PRPF8
chr203998587839985992+intron-Proximal4.7898312.84062K562EFTUD2
chr203998086239980915+intron-Proximal4.756274.97857HepG2AQR
chr203998609139986142+intron-Proximal5.0128330.52265HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LPIN3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LPIN3 is not available on ENCORE database.

  • 97 RBPs can affect the levels of LPIN3.  








The Knockdown/knockout RNA-Seq assay for LPIN3 is not available on ENCORE database.





97 RBPs can affect the gene expression of LPIN3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LPIN3ENSG00000132793.71151.528401536.86430-0.416406.973906.09690HepG2ACO1
LPIN3ENSG00000132793.71797.179501542.737800.220101.986201.38760HepG2AUH
LPIN3ENSG00000132793.71613.28760847.656400.9284010.168608.31740HepG2BCCIP
LPIN3ENSG00000132793.71232.97520736.474600.743307.042305.68720HepG2BCLAF1
LPIN3ENSG00000132793.71780.959601307.929600.445304.341502.81720HepG2BUD13
LPIN3ENSG00000132793.72272.699901706.378400.413402.636901.68860HepG2CCAR1
LPIN3ENSG00000132793.7457.57340803.83240-0.812905.291404.23110HepG2CNOT7
LPIN3ENSG00000132793.71362.61090811.515600.747609.527308.32450HepG2CPSF6
LPIN3ENSG00000132793.71258.907701000.497900.331403.470702.32820HepG2YBX3
LPIN3ENSG00000132793.71886.363201659.200700.185002.240101.56270HepG2DAZAP1
LPIN3ENSG00000132793.71632.074901421.307500.199402.184401.43680HepG2DDX19B
LPIN3ENSG00000132793.71495.841801095.458900.449302.448401.80620HepG2DDX21
LPIN3ENSG00000132793.7758.216401073.13710-0.501202.743701.83570HepG2DDX24
LPIN3ENSG00000132793.71805.32080833.460001.1150014.8687013.26340HepG2DDX55
LPIN3ENSG00000132793.71174.79920982.361000.258002.251601.61140HepG2DNAJC21
LPIN3ENSG00000132793.71416.12700973.763400.5402010.526009.35220HepG2DNAJC2
LPIN3ENSG00000132793.72571.553501115.607001.2047023.0637021.45890HepG2EIF2S1
LPIN3ENSG00000132793.72861.418701232.624601.2149020.7420019.02310HepG2EIF4A3
LPIN3ENSG00000132793.72195.862501771.313000.309903.975803.27730HepG2ETF1
LPIN3ENSG00000132793.71305.91580909.908300.521206.580604.75490HepG2FAM120A
LPIN3ENSG00000132793.71616.10300974.483000.7297010.815009.30900HepG2FUBP3
LPIN3ENSG00000132793.71834.432101153.989600.668606.939205.90480HepG2G3BP1
LPIN3ENSG00000132793.71802.478301225.632500.556404.672103.50110HepG2G3BP2
LPIN3ENSG00000132793.71216.38170919.893800.403002.626201.99980HepG2GPKOW
LPIN3ENSG00000132793.71407.05080991.773100.504505.471604.60610HepG2HNRNPA1
LPIN3ENSG00000132793.72027.667801524.878900.411006.750305.40010HepG2HNRNPA2B1
LPIN3ENSG00000132793.71880.580501192.901200.6566014.8927013.40090HepG2HNRNPF
LPIN3ENSG00000132793.71650.976501169.456400.497403.428802.65390HepG2HNRNPK
LPIN3ENSG00000132793.71998.595301511.388500.403008.442607.32390HepG2HNRNPL
LPIN3ENSG00000132793.71167.23610877.873700.410902.997402.34590HepG2HNRNPLL
LPIN3ENSG00000132793.71502.792401095.894300.455404.203503.46950HepG2HNRNPU
LPIN3ENSG00000132793.71777.536501174.662300.597508.933107.70260HepG2IGF2BP1
LPIN3ENSG00000132793.71678.128101172.862400.516703.204202.48370HepG2IGF2BP2
LPIN3ENSG00000132793.71935.742501119.415400.7900028.3921026.35830HepG2ILF2
LPIN3ENSG00000132793.71651.140401179.966300.484603.144802.06740HepG2KHSRP
LPIN3ENSG00000132793.72320.562901802.565300.364302.222901.48540HepG2LARP4
LPIN3ENSG00000132793.71607.881401244.867600.369102.089801.51690HepG2MAGOH
LPIN3ENSG00000132793.71602.34670895.365700.839507.141505.54770HepG2MTPAP
LPIN3ENSG00000132793.71513.752701197.992900.337402.547201.38320HepG2NAA15
LPIN3ENSG00000132793.71110.06120778.419100.511904.529603.57870HepG2NSUN2
LPIN3ENSG00000132793.71325.014601100.204600.268102.853002.24020HepG2PCBP1
LPIN3ENSG00000132793.7484.20520720.87570-0.574102.970701.39330HepG2PNPT1
LPIN3ENSG00000132793.71492.33950977.445700.6104010.753409.35040HepG2PPIL4
LPIN3ENSG00000132793.71126.784501667.23850-0.5652013.6746012.56720HepG2PUM1
LPIN3ENSG00000132793.7610.495601071.87640-0.812105.041104.10380HepG2RAVER1
LPIN3ENSG00000132793.71268.485401480.48080-0.223001.945301.49090HepG2RBM22
LPIN3ENSG00000132793.71382.469601100.366500.329202.866502.18250HepG2RBM25
LPIN3ENSG00000132793.7771.795801287.75060-0.738608.762606.98900HepG2RBM27
LPIN3ENSG00000132793.7519.57800776.38870-0.579403.471401.76080HepG2RBM47
LPIN3ENSG00000132793.71536.000501245.906300.301903.498702.90570HepG2NELFE
LPIN3ENSG00000132793.71585.951601160.451200.450607.268806.34060HepG2RECQL
LPIN3ENSG00000132793.71910.039701285.119300.571606.962505.95220HepG2RPLP0
LPIN3ENSG00000132793.71410.67360990.568900.510005.769704.91960HepG2RPS19
LPIN3ENSG00000132793.71626.82260807.238301.0109011.206209.63920HepG2RPS3A
LPIN3ENSG00000132793.7948.989401212.32980-0.353302.564001.53140HepG2RPS5
LPIN3ENSG00000132793.71673.86930975.927300.7782022.4417020.85480HepG2SAFB2
LPIN3ENSG00000132793.7912.550201918.17190-1.0718013.0614011.53110HepG2SF3A3
LPIN3ENSG00000132793.71939.561101505.960000.364906.800805.78030HepG2SLBP
LPIN3ENSG00000132793.72150.334701672.132600.362806.057405.39520HepG2SRFBP1
LPIN3ENSG00000132793.7914.046001216.57280-0.412505.157304.56300HepG2SRSF1
LPIN3ENSG00000132793.7627.13330934.98530-0.576203.719402.54090HepG2SRSF3
LPIN3ENSG00000132793.71276.189801550.72230-0.281103.078402.42240HepG2SRSF5
LPIN3ENSG00000132793.71713.728201172.002700.5481010.208609.01760HepG2SRSF7
LPIN3ENSG00000132793.71782.680701451.778900.296102.247601.77440HepG2SSB
LPIN3ENSG00000132793.71528.710101190.165800.361102.856301.90030HepG2SUPT6H
LPIN3ENSG00000132793.71530.15550829.638000.883009.600108.46700HepG2SUPV3L1
LPIN3ENSG00000132793.71149.61200855.714100.425803.429802.63250HepG2TARDBP
LPIN3ENSG00000132793.73361.743501064.770101.6586053.3591051.69140HepG2TIAL1
LPIN3ENSG00000132793.71582.750801074.391400.5588010.383809.39540HepG2TRIM56
LPIN3ENSG00000132793.71083.244801508.05980-0.477304.019403.26850HepG2U2AF1
LPIN3ENSG00000132793.7809.66550490.052700.724306.602505.41840HepG2UCHL5
LPIN3ENSG00000132793.71997.870601701.120800.231902.701302.00970HepG2UPF1
LPIN3ENSG00000132793.71681.74520759.540001.1467012.3277010.14260HepG2UPF2
LPIN3ENSG00000132793.7875.325501642.37200-0.9079025.7277024.18370HepG2UTP3
LPIN3ENSG00000132793.71755.50690816.689401.1039016.8783015.11880HepG2XRN2
LPIN3ENSG00000132793.72249.298601870.913500.265604.409303.76080HepG2ZNF622
LPIN3ENSG00000132793.7209.54710341.85640-0.706104.378102.85320K562AARS
LPIN3ENSG00000132793.7425.60480583.33900-0.454802.964402.36020K562AQR
LPIN3ENSG00000132793.7433.34470319.722200.438602.230001.45250K562BOP1
LPIN3ENSG00000132793.7540.21810339.946000.668105.929904.78580K562CPSF6
LPIN3ENSG00000132793.7575.67840759.93510-0.400603.744702.70400K562DKC1
LPIN3ENSG00000132793.7495.24300332.874600.573103.407502.39000K562EFTUD2
LPIN3ENSG00000132793.7638.25260463.904300.460204.191903.33380K562EIF2S2
LPIN3ENSG00000132793.7418.02990293.196400.511602.799901.87970K562FTO
LPIN3ENSG00000132793.7210.25460395.32200-0.910909.115908.09170K562FXR1
LPIN3ENSG00000132793.770.25820199.86120-1.508309.197407.75660K562G3BP2
LPIN3ENSG00000132793.7548.59690324.556400.757206.854205.60410K562GPKOW
LPIN3ENSG00000132793.7491.72770333.983100.558003.904302.52220K562HNRNPF
LPIN3ENSG00000132793.7471.56660333.557300.499403.224101.54270K562LSM11
LPIN3ENSG00000132793.7691.77720568.064800.284202.200301.47540K562MTPAP
LPIN3ENSG00000132793.7780.77750631.125800.306902.968402.19950K562NSUN2
LPIN3ENSG00000132793.7573.39680368.261700.638705.084502.92830K562NUSAP1
LPIN3ENSG00000132793.7576.85610365.124200.659705.566103.46570K562PHF6
LPIN3ENSG00000132793.7795.12960557.720400.511503.762401.91680K562PKM
LPIN3ENSG00000132793.7223.33070323.92900-0.536502.061101.40970K562PRPF8
LPIN3ENSG00000132793.7626.01550335.293600.900709.854207.91360K562PSIP1
LPIN3ENSG00000132793.7183.52960327.43550-0.835202.475701.84160K562PTBP1
LPIN3ENSG00000132793.7570.56490978.09950-0.777609.255807.74470K562PUF60
LPIN3ENSG00000132793.7825.569601040.44930-0.333702.700001.64760K562PUM1
LPIN3ENSG00000132793.7415.70690305.980600.442002.617001.65530K562RCC2
LPIN3ENSG00000132793.7422.30670290.054400.541903.271602.13220K562SRFBP1
LPIN3ENSG00000132793.7448.03410313.442200.515302.557601.58460K562SUPV3L1
LPIN3ENSG00000132793.7262.87240426.12910-0.696905.844204.64110K562SYNCRIP
LPIN3ENSG00000132793.7565.43700324.819700.799603.652202.83500K562TARDBP
LPIN3ENSG00000132793.7625.04840322.488000.954609.489307.67080K562TIAL1
LPIN3ENSG00000132793.7459.74860342.678500.423902.313101.45970K562TRIM56
LPIN3ENSG00000132793.7141.78200200.01250-0.496402.110301.40970K562U2AF2
LPIN3ENSG00000132793.7751.59600572.607200.392303.077702.15660K562WDR3
LPIN3ENSG00000132793.7908.11640657.096300.466704.106503.02050K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LPIN3 is not available on ENCORE database.





13 RBPs can affect the splicing of LPIN3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELPIN3ENSG00000132793.7chr20+399862763998641239986066399860873998652139986597-0.268000.001180.06792excludedHepG2RBM22
SELPIN3ENSG00000132793.7chr20+399862393998641239986066399860873998652139986597-0.326000.000920.01902excludedHepG2U2AF1
SELPIN3ENSG00000132793.7chr20+3996981939969949399695593996964239974435399746350.155000.001020.07792includedK562XRCC6
SELPIN3ENSG00000132793.7chr20+3998623939986412399860003998608739986521399866740.380000.000210.00756includedHepG2HNRNPK
SELPIN3ENSG00000132793.7chr20+3996981939969949399695593996964239974435399746350.100000.000160.01923includedHepG2QKI
SELPIN3ENSG00000132793.7chr20+3998097739981062399806993998086039981245399813390.103000.000020.00336includedHepG2QKI
SELPIN3ENSG00000132793.7chr20+3996981939969949399695593996964239974435399746350.097000.000490.07337includedHepG2TIA1
SELPIN3ENSG00000132793.7chr20+3998623939986412399860003998608739986521399865970.327000.000050.01455includedHepG2RBM15
SELPIN3ENSG00000132793.7chr20+399862393998641239986000399860873998652139986674-0.316000.002010.06621excludedHepG2HNRNPC
A3SSLPIN3ENSG00000132793.7chr20+3998124539981339399812773998133939980699399808600.102000.000050.00215longerHepG2U2AF2
A3SSLPIN3ENSG00000132793.7chr20+399812453998133939981277399813393998069939980860-0.120000.000000.00104shorterHepG2LARP4
A3SSLPIN3ENSG00000132793.7chr20+399812453998133939981277399813393998069939980860-0.114000.000060.03021shorterHepG2TBRG4
MXELPIN3ENSG00000132793.7chr20+3998567939985793399857933998582839984535399846743998600039986087-0.220000.004770.075792includedHepG2SRSF1
MXELPIN3ENSG00000132793.7chr20+39974435399746353997619139976287399695593996964239977258399775270.253000.000120.007001includedHepG2XRN2
MXELPIN3ENSG00000132793.7chr20+39985549399856233998567939985828399845353998467439986000399860870.246000.000360.003421includedHepG2U2AF2
MXELPIN3ENSG00000132793.7chr20+3998127739981507399832843998337739980699399808603998345939983503-0.079000.011320.059532includedHepG2U2AF2
MXELPIN3ENSG00000132793.7chr20+39981277399815073998328439983377399806993998086039983459399835030.138000.000310.024571includedHepG2TBRG4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LPIN3 is not avaliable on ENCORE database.