KCTD10

General Information

Gene Name       : KCTD10
Gene ID             : ENSG00000110906.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KCTD10)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KCTD10ENSG00000110906.1221.0224.6722.84ENCSR000AEF
HepG2KCTD10ENSG00000110906.1221.8215.8218.82ENCSR985KAT
K562KCTD10ENSG00000110906.1218.6912.9115.80ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KCTD10 is not avaliable on ENCORE database.



Proteins bound to RNA
  • KCTD10 RNA is bound by 7 proteins.  







eCLIP assay for KCTD10 is not avaliable on ENCORE database.





7 proteins are bound to KCTD10 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12109887146109887218-3'-UTR,intron-Distal4.168737.49447K562UPF1
chr12109889016109889062-3'-UTR,intron-Distal,intron-Proximal4.553914.56348K562UPF1
chr12109888121109888221-3'-UTR,intron-Distal5.079778.19969HepG2UPF1
chr12109898467109898610-3'-UTR,CDS,intron-Distal3.668133.14999HepG2GRWD1
chr12109888066109888229-3'-UTR,intron-Distal4.7158024.60625K562UPF1
chr12109888338109888427-3'-UTR,intron-Distal4.057634.25479HepG2PCBP2
chr12109896564109896624-5'-UTR,intron-Distal4.717544.75034HepG2XPO5
chr12109907281109907351-5'-UTR,CDS,intron-Distal,intron-Proximal5.580488.72621HepG2PRPF8
chr12109896938109897072-intron-Distal4.6223111.65716K562PTBP1
chr12109896925109897085-intron-Distal4.624594.75674K562MATR3
chr12109896816109896899-intron-Distal,intron-Proximal4.193545.63677K562PTBP1
chr12109896917109897082-intron-Distal5.338788.82480HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KCTD10 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KCTD10 is not available on ENCORE database.

  • 89 RBPs can affect the levels of KCTD10.  








The Knockdown/knockout RNA-Seq assay for KCTD10 is not available on ENCORE database.





89 RBPs can affect the gene expression of KCTD10 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KCTD10ENSG00000110906.81243.40330745.736300.7375016.5716015.34850HepG2ACO1
KCTD10ENSG00000110906.81691.643601013.697200.738707.399206.57440HepG2AKAP1
KCTD10ENSG00000110906.8921.12060683.631300.430102.753201.71650HepG2AKAP8
KCTD10ENSG00000110906.81039.01660749.273100.471606.281705.17030HepG2AKAP8L
KCTD10ENSG00000110906.81011.87150729.969400.471004.137003.42190HepG2BOP1
KCTD10ENSG00000110906.8879.76420696.628700.336602.699901.93790HepG2CALR
KCTD10ENSG00000110906.8522.27440745.61410-0.513606.622605.67440HepG2CKAP4
KCTD10ENSG00000110906.81787.966101012.668100.8201020.5760019.15000HepG2CELF1
KCTD10ENSG00000110906.8892.27550667.064500.419603.186202.46180HepG2DDX21
KCTD10ENSG00000110906.8543.02140971.05610-0.838508.945707.87440HepG2DDX3X
KCTD10ENSG00000110906.81138.15750761.931400.578903.688702.80960HepG2DDX55
KCTD10ENSG00000110906.8586.40380713.47790-0.283002.085701.48510HepG2DKC1
KCTD10ENSG00000110906.8870.82270697.694900.319702.725202.02520HepG2DNAJC21
KCTD10ENSG00000110906.8495.45530732.63860-0.564305.454203.84840HepG2EIF2S2
KCTD10ENSG00000110906.8685.30920532.128600.364902.253001.42950HepG2EIF3D
KCTD10ENSG00000110906.81243.44930862.818600.527103.270802.52610HepG2EIF4B
KCTD10ENSG00000110906.8559.57040728.75300-0.381102.772801.93690HepG2EWSR1
KCTD10ENSG00000110906.81353.21790975.321000.472303.308802.47410HepG2FIP1L1
KCTD10ENSG00000110906.8353.72160671.28040-0.924303.848402.64990HepG2FTO
KCTD10ENSG00000110906.81146.36690894.103500.358502.355501.71490HepG2FXR1
KCTD10ENSG00000110906.81015.23380662.020000.616805.860604.36220HepG2GNB2L1
KCTD10ENSG00000110906.8296.60610481.73030-0.699704.464002.67190HepG2HNRNPAB
KCTD10ENSG00000110906.8447.77840725.03000-0.695305.953805.06660HepG2HNRNPLL
KCTD10ENSG00000110906.8631.08520778.31580-0.302502.601002.01410HepG2HNRNPU
KCTD10ENSG00000110906.81018.48080744.207300.452502.588801.40370HepG2HSPD1
KCTD10ENSG00000110906.81209.20220843.106200.520204.426403.58790HepG2IGF2BP2
KCTD10ENSG00000110906.8599.96230848.00770-0.499202.905701.87520HepG2KHSRP
KCTD10ENSG00000110906.8526.32240681.72130-0.373203.706402.52700HepG2KIF1C
KCTD10ENSG00000110906.8757.842401219.24950-0.686005.662804.46190HepG2LARP4
KCTD10ENSG00000110906.81140.00260899.427500.341901.920201.39030HepG2MATR3
KCTD10ENSG00000110906.8879.65150556.905900.659403.529102.34570HepG2METAP2
KCTD10ENSG00000110906.81175.65460789.245400.574806.279805.10650HepG2MSI2
KCTD10ENSG00000110906.8760.295401079.73640-0.506006.127904.99520HepG2NOL12
KCTD10ENSG00000110906.8438.05090642.84100-0.553403.830702.95250HepG2NSUN2
KCTD10ENSG00000110906.8799.02600533.462100.582802.821801.92280HepG2PABPC1
KCTD10ENSG00000110906.8520.89570694.19470-0.414303.698002.85820HepG2PPIL4
KCTD10ENSG00000110906.8461.40070746.15930-0.693509.265807.97070HepG2PRPF4
KCTD10ENSG00000110906.8852.82790587.476900.537603.440002.54870HepG2PRPF8
KCTD10ENSG00000110906.81330.82630833.390100.6752013.5954012.56490HepG2PTBP1
KCTD10ENSG00000110906.8776.880601030.69750-0.407903.464102.80730HepG2PUF60
KCTD10ENSG00000110906.8944.463801094.12450-0.212202.044901.51950HepG2PUM1
KCTD10ENSG00000110906.81127.63220759.586700.569909.949508.90370HepG2PUS1
KCTD10ENSG00000110906.81258.87290717.127700.811705.263204.30820HepG2RAVER1
KCTD10ENSG00000110906.81810.769501032.431700.8105019.1377018.02510HepG2RBM22
KCTD10ENSG00000110906.81059.13020819.144800.370603.035302.33270HepG2RBM25
KCTD10ENSG00000110906.81109.45090927.478400.258402.216701.72160HepG2NELFE
KCTD10ENSG00000110906.8731.00830517.806700.497404.164603.42610HepG2RPS19
KCTD10ENSG00000110906.8472.71310693.12190-0.552106.744805.80460HepG2SAFB2
KCTD10ENSG00000110906.8671.12340519.664600.368902.181501.34220HepG2SERBP1
KCTD10ENSG00000110906.81520.10150912.432300.736306.345205.30050HepG2SF3A3
KCTD10ENSG00000110906.8550.20670717.66570-0.383302.352701.69960HepG2SF3B1
KCTD10ENSG00000110906.81027.76040867.656500.244201.970601.45780HepG2SF3B4
KCTD10ENSG00000110906.8810.52160988.26510-0.286002.928502.20790HepG2SLBP
KCTD10ENSG00000110906.81629.28880798.518501.028709.857108.38980HepG2SNRNP70
KCTD10ENSG00000110906.82366.362501166.090101.0209041.5174040.17570HepG2SRFBP1
KCTD10ENSG00000110906.81226.86840905.649700.437905.982505.35300HepG2SRSF1
KCTD10ENSG00000110906.81267.271301017.655900.316403.507902.81860HepG2SRSF5
KCTD10ENSG00000110906.8863.82440736.797800.229401.856601.38820HepG2SRSF9
KCTD10ENSG00000110906.8772.849101012.43630-0.389604.660204.02920HepG2SSB
KCTD10ENSG00000110906.8549.52920741.65820-0.432602.659501.40140HepG2SSRP1
KCTD10ENSG00000110906.8474.35080814.04480-0.7792011.4178010.40170HepG2TAF15
KCTD10ENSG00000110906.8296.20390508.28170-0.779006.034104.65350HepG2TFIP11
KCTD10ENSG00000110906.8968.20890756.262200.356303.062302.54080HepG2TIAL1
KCTD10ENSG00000110906.8454.56750763.04090-0.7473011.9331010.88000HepG2TRIM56
KCTD10ENSG00000110906.81489.46380834.257800.8361011.077109.79900HepG2U2AF1
KCTD10ENSG00000110906.81439.171601065.820400.433202.999602.12890HepG2UBE2L3
KCTD10ENSG00000110906.8348.00490447.95620-0.364302.043701.39140HepG2UCHL5
KCTD10ENSG00000110906.81013.98690809.187400.325403.499402.72850HepG2UPF1
KCTD10ENSG00000110906.81262.59340781.239500.6925014.0440012.85270HepG2UTP3
KCTD10ENSG00000110906.8467.97890736.32180-0.653908.279507.22200HepG2ZC3H8
KCTD10ENSG00000110906.81291.96090889.952000.5377010.859009.95260HepG2ZNF622
KCTD10ENSG00000110906.81429.49180823.207500.7961018.3803017.03840K562AGGF1
KCTD10ENSG00000110906.81412.23420856.583700.7212010.048408.70070K562AKAP8L
KCTD10ENSG00000110906.83436.091601031.613401.7358058.9257056.57650K562AQR
KCTD10ENSG00000110906.81182.66810898.760700.395904.422403.23820K562ATP5C1
KCTD10ENSG00000110906.8607.19100930.34770-0.615603.235402.07200K562CNOT7
KCTD10ENSG00000110906.81242.951301032.975400.266902.434201.40170K562CPEB4
KCTD10ENSG00000110906.81236.77170921.751400.424005.259903.99840K562DKC1
KCTD10ENSG00000110906.81033.741701371.61360-0.408004.833803.60920K562EIF4G2
KCTD10ENSG00000110906.8857.88600677.060200.341402.998002.37160K562FXR1
KCTD10ENSG00000110906.8656.40690816.16460-0.314302.434501.37030K562GLRX3
KCTD10ENSG00000110906.8560.58130870.70260-0.635303.652201.83080K562HNRNPAB
KCTD10ENSG00000110906.8717.75620904.57500-0.333702.879701.96850K562HNRNPU
KCTD10ENSG00000110906.8300.02050491.28390-0.711504.277403.08800K562KRR1
KCTD10ENSG00000110906.8628.26470829.85170-0.401503.355402.32680K562MATR3
KCTD10ENSG00000110906.81421.691901018.368300.481205.242603.90590K562MBNL1
KCTD10ENSG00000110906.81231.32840713.802100.786502.721201.84610K562NAA15
KCTD10ENSG00000110906.8787.35610953.37750-0.276002.790202.04120K562NSUN2
KCTD10ENSG00000110906.81093.69900602.668300.859704.388203.06550K562PABPN1
KCTD10ENSG00000110906.8596.87090825.99880-0.468702.997502.13240K562PCBP3
KCTD10ENSG00000110906.8466.99470633.60780-0.440202.676501.89060K562POLR2G
KCTD10ENSG00000110906.8844.57760551.673300.614305.379204.33050K562PRPF8
KCTD10ENSG00000110906.81001.05380807.940500.309102.397301.77180K562PTBP1
KCTD10ENSG00000110906.82342.34270849.502901.4632037.5703035.51030K562PUS1
KCTD10ENSG00000110906.81483.01270827.706900.8412017.5011015.98860K562RBM15
KCTD10ENSG00000110906.8782.39670583.877100.422103.262401.80830K562RBM25
KCTD10ENSG00000110906.81256.26550551.151501.188506.382304.30690K562SF1
KCTD10ENSG00000110906.81153.20130940.811200.293602.806601.98700K562SF3A3
KCTD10ENSG00000110906.8400.69300540.45420-0.431702.714501.46170K562SLBP
KCTD10ENSG00000110906.81124.27620632.970100.828703.745002.23440K562SNRNP200
KCTD10ENSG00000110906.81169.60060792.075600.562206.709405.61740K562SRSF1
KCTD10ENSG00000110906.8959.40320596.677100.685106.075704.31450K562U2AF1
KCTD10ENSG00000110906.8763.54040616.372500.308802.136501.43100K562U2AF2
KCTD10ENSG00000110906.8692.10990899.52180-0.378204.289503.25240K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KCTD10 is not available on ENCORE database.





9 RBPs can affect the splicing of KCTD10 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEKCTD10ENSG00000110906.8chr12-1098981521098982231098957961098958831098984401098986320.101000.002310.02472includedK562AQR
A3SSKCTD10ENSG00000110906.8chr12-1098957961098959891098957961098958831098984401098986100.201000.000200.01465longerK562SF3B4
A3SSKCTD10ENSG00000110906.8chr12-1098957961098959891098957961098958831098984401098986100.128000.000640.01862longerHepG2U2AF2
A3SSKCTD10ENSG00000110906.8chr12-1098954341098956121098954341098954871098957961098959180.109000.000030.00029longerK562AQR
A3SSKCTD10ENSG00000110906.8chr12-1099073191099091821099073191099075331099150641099151050.127000.000120.00104longerK562AQR
A3SSKCTD10ENSG00000110906.8chr12-1098984401098986651098984401098986101099073191099075330.087000.014390.07217longerK562AQR
A3SSKCTD10ENSG00000110906.8chr12-1098957961098960231098957961098958831098984401098986100.565000.000000.00000longerK562AQR
A3SSKCTD10ENSG00000110906.8chr12-1098957961098959891098957961098958831098984401098986100.129000.001140.05391longerK562PUS1
A3SSKCTD10ENSG00000110906.8chr12-1098957961098959891098957961098958861098984401098986100.497000.000190.03534longerK562UTP18
A3SSKCTD10ENSG00000110906.8chr12-1098957961098959891098957961098958831098984401098986100.156000.002030.07749longerK562U2AF1
A3SSKCTD10ENSG00000110906.8chr12-1098957961098959891098957961098958861098984401098986100.440000.000050.00966longerK562RBM15
MXEKCTD10ENSG00000110906.8chr12-109895796109895883109898440109898610109895434109895487109907319109907533-0.190000.002010.049852includedK562SBDS
MXEKCTD10ENSG00000110906.8chr12-1098957961098958831098984401098986101098954341098954871099073191099075330.174000.005810.099691includedHepG2TIAL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for KCTD10 is not avaliable on ENCORE database.