KCTD10

General Information

Gene Name : KCTD10
Gene ID : ENSG00000110906.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KCTD10)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KCTD10	ENSG00000110906.12	21.02	24.67	22.84	ENCSR000AEF
HepG2	KCTD10	ENSG00000110906.12	21.82	15.82	18.82	ENCSR985KAT
K562	KCTD10	ENSG00000110906.12	18.69	12.91	15.80	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KCTD10 is not avaliable on ENCORE database.

Proteins bound to RNA

KCTD10 RNA is bound by 7 proteins.

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eCLIP assay for KCTD10 is not avaliable on ENCORE database.

7 proteins are bound to KCTD10 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	109888066	109888229	-	3'-UTR,intron-Distal	4.71580	24.60625	K562	UPF1
chr12	109896938	109897072	-	intron-Distal	4.62231	11.65716	K562	PTBP1
chr12	109896917	109897082	-	intron-Distal	5.33878	8.82480	HepG2	PTBP1
chr12	109907281	109907351	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.58048	8.72621	HepG2	PRPF8
chr12	109888121	109888221	-	3'-UTR,intron-Distal	5.07977	8.19969	HepG2	UPF1
chr12	109887146	109887218	-	3'-UTR,intron-Distal	4.16873	7.49447	K562	UPF1
chr12	109896816	109896899	-	intron-Distal,intron-Proximal	4.19354	5.63677	K562	PTBP1
chr12	109896925	109897085	-	intron-Distal	4.62459	4.75674	K562	MATR3
chr12	109896564	109896624	-	5'-UTR,intron-Distal	4.71754	4.75034	HepG2	XPO5
chr12	109889016	109889062	-	3'-UTR,intron-Distal,intron-Proximal	4.55391	4.56348	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 12 entries

eCLIP assay for KCTD10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KCTD10 is not available on ENCORE database.
89 RBPs can affect the levels of KCTD10.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KCTD10 is not available on ENCORE database.

89 RBPs can affect the gene expression of KCTD10 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KCTD10	ENSG00000110906.8	3436.09160	1031.61340	1.73580	58.92570	56.57650	K562	AQR
KCTD10	ENSG00000110906.8	2366.36250	1166.09010	1.02090	41.51740	40.17570	HepG2	SRFBP1
KCTD10	ENSG00000110906.8	2342.34270	849.50290	1.46320	37.57030	35.51030	K562	PUS1
KCTD10	ENSG00000110906.8	1787.96610	1012.66810	0.82010	20.57600	19.15000	HepG2	CELF1
KCTD10	ENSG00000110906.8	1810.76950	1032.43170	0.81050	19.13770	18.02510	HepG2	RBM22
KCTD10	ENSG00000110906.8	1429.49180	823.20750	0.79610	18.38030	17.03840	K562	AGGF1
KCTD10	ENSG00000110906.8	1483.01270	827.70690	0.84120	17.50110	15.98860	K562	RBM15
KCTD10	ENSG00000110906.8	1243.40330	745.73630	0.73750	16.57160	15.34850	HepG2	ACO1
KCTD10	ENSG00000110906.8	1262.59340	781.23950	0.69250	14.04400	12.85270	HepG2	UTP3
KCTD10	ENSG00000110906.8	1330.82630	833.39010	0.67520	13.59540	12.56490	HepG2	PTBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 104 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KCTD10 is not available on ENCORE database.

9 RBPs can affect the splicing of KCTD10 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	KCTD10	ENSG00000110906.8	chr12	-	109895796	109896023			109895796	109895883	109898440	109898610	0.56500	0.00000	0.00000	longer	K562	AQR
A3SS	KCTD10	ENSG00000110906.8	chr12	-	109895434	109895612			109895434	109895487	109895796	109895918	0.10900	0.00003	0.00029	longer	K562	AQR
A3SS	KCTD10	ENSG00000110906.8	chr12	-	109895796	109895989			109895796	109895886	109898440	109898610	0.44000	0.00005	0.00966	longer	K562	RBM15
A3SS	KCTD10	ENSG00000110906.8	chr12	-	109907319	109909182			109907319	109907533	109915064	109915105	0.12700	0.00012	0.00104	longer	K562	AQR
A3SS	KCTD10	ENSG00000110906.8	chr12	-	109895796	109895989			109895796	109895886	109898440	109898610	0.49700	0.00019	0.03534	longer	K562	UTP18
A3SS	KCTD10	ENSG00000110906.8	chr12	-	109895796	109895989			109895796	109895883	109898440	109898610	0.20100	0.00020	0.01465	longer	K562	SF3B4
A3SS	KCTD10	ENSG00000110906.8	chr12	-	109895796	109895989			109895796	109895883	109898440	109898610	0.12800	0.00064	0.01862	longer	HepG2	U2AF2
A3SS	KCTD10	ENSG00000110906.8	chr12	-	109895796	109895989			109895796	109895883	109898440	109898610	0.12900	0.00114	0.05391	longer	K562	PUS1
MXE	KCTD10	ENSG00000110906.8	chr12	-	109895796	109895883	109898440	109898610	109895434	109895487	109907319	109907533	-0.19000	0.00201	0.04985	2included	K562	SBDS
A3SS	KCTD10	ENSG00000110906.8	chr12	-	109895796	109895989			109895796	109895883	109898440	109898610	0.15600	0.00203	0.07749	longer	K562	U2AF1

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KCTD10

General Information

Functions

Localization

Domains (AlphaFold: KCTD10)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KCTD10 is not avaliable on ENCORE database.

7 proteins are bound to KCTD10 RNA:

eCLIP assay for KCTD10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KCTD10 is not available on ENCORE database.

89 RBPs can affect the gene expression of KCTD10 :

The Knockdown/knockout RNA-Seq assay for KCTD10 is not available on ENCORE database.

9 RBPs can affect the splicing of KCTD10 :

The Knockdown/knockout RNA-Seq assay for KCTD10 is not avaliable on ENCORE database.