IMPA1

General Information

Gene Name       : IMPA1
Gene ID             : ENSG00000133731.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: IMPA1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878IMPA1ENSG00000133731.924.8126.8225.81ENCSR000AEF
HepG2IMPA1ENSG00000133731.910.1219.0514.59ENCSR985KAT
K562IMPA1ENSG00000133731.929.1121.6525.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for IMPA1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • IMPA1 RNA is bound by 11 proteins.  







eCLIP assay for IMPA1 is not avaliable on ENCORE database.





11 proteins are bound to IMPA1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr88258612982586178-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.277725.79905HepG2BCLAF1
chr88257165982571693-3'-UTR,CDS,intron-Distal4.741305.68196HepG2BCLAF1
chr88257286182572916-3'-UTR,CDS,intron-Distal,intron-Proximal4.181025.18845HepG2U2AF2
chr88257282282572912-3'-UTR,CDS,intron-Distal,intron-Proximal3.930873.58455K562U2AF2
chr88257121082571287-3'-UTR,intron-Distal,intron-Proximal3.300745.59934K562FAM120A
chr88257030082570439-3'-UTR,intron-Distal4.582787.77386HepG2FUBP3
chr88258317282583215-3'-UTR,CDS,intron-Distal,intron-Proximal4.624076.22576HepG2BCLAF1
chr88258846282588531-3'-UTR,CDS,intron-Distal,intron-Proximal4.247896.65517HepG2U2AF2
chr88257275882572837-3'-UTR,CDS,intron-Distal,intron-Proximal4.092408.94445HepG2BCLAF1
chr88258613082586184-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.539684.15629K562PUM2
chr88257283782572903-3'-UTR,CDS,intron-Distal,intron-Proximal4.7021911.55759HepG2BCLAF1
chr88258846682588517-3'-UTR,CDS,intron-Distal,intron-Proximal4.4995815.03557K562PUM2
chr88259872682598750-5'-UTR,intron-Distal4.593114.78529HepG2BCLAF1
chr88259863582598695-5'-UTR,intron-Distal,intron-Proximal3.308884.23325HepG2BCLAF1
chr88259837782598490-5'-UTR,intron-Distal,intron-Proximal3.398974.98422K562PRPF8
chr88259842882598511-5'-UTR,intron-Distal3.9258112.03869HepG2PRPF8
chr88259851782598581-5'-UTR,intron-Distal,intron-Proximal3.350303.61820HepG2HLTF
chr88259292382592986-CDS,intron-Distal3.422594.61799HepG2BCLAF1
chr88259140982591466-CDS,intron-Distal,intron-Proximal4.5781911.11870HepG2BCLAF1
chr88259288382592916-CDS,intron-Distal,intron-Proximal4.095217.23562HepG2BCLAF1
chr88259575182595817-intron-Distal3.353994.35402HepG2SUGP2
chr88259358982593635-intron-Distal,intron-Proximal4.091953.12843K562PRPF8
chr88258835482588396-intron-Distal,intron-Proximal3.252834.30679K562KHSRP
chr88258918182589219-intron-Distal3.016023.00589HepG2HNRNPC
chr88258827182588354-intron-Distal4.032547.22994K562KHSRP
chr88259123782591344-intron-Distal,intron-Proximal4.238343.89565K562PRPF8
chr88259127182591331-intron-Distal,intron-Proximal4.082494.02395HepG2KHSRP
chr88257306582573115-intron-Distal3.953133.89294K562KHSRP
chr88259837682598454-intron-Distal,intron-Proximal3.609975.69108HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for IMPA1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for IMPA1 is not available on ENCORE database.

  • 71 RBPs can affect the levels of IMPA1.  








The Knockdown/knockout RNA-Seq assay for IMPA1 is not available on ENCORE database.





71 RBPs can affect the gene expression of IMPA1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
IMPA1ENSG00000133731.5416.99770578.75680-0.472902.357501.48570HepG2ABCF1
IMPA1ENSG00000133731.51226.30110860.690000.510603.578402.98380HepG2AKAP1
IMPA1ENSG00000133731.5686.87290549.091100.322901.914501.40870HepG2BOP1
IMPA1ENSG00000133731.5446.22110676.58500-0.600504.563703.58380HepG2CIRBP
IMPA1ENSG00000133731.5215.74720504.10940-1.2244012.1120010.79180HepG2CPSF6
IMPA1ENSG00000133731.5613.46860739.26760-0.269102.328101.64020HepG2DAZAP1
IMPA1ENSG00000133731.5318.17700428.68320-0.430103.429202.71720HepG2DNAJC2
IMPA1ENSG00000133731.5508.42580680.83370-0.421302.484801.92120HepG2EIF2S1
IMPA1ENSG00000133731.5555.58210752.38080-0.437502.486601.87930HepG2EIF4A3
IMPA1ENSG00000133731.5903.76070729.305900.309302.683301.85590HepG2EIF4G1
IMPA1ENSG00000133731.5536.89600759.18280-0.499803.427802.66270HepG2FXR1
IMPA1ENSG00000133731.5514.27490713.92380-0.473202.348301.32120HepG2GRSF1
IMPA1ENSG00000133731.5361.36180485.69680-0.426602.366901.72030HepG2HNRNPC
IMPA1ENSG00000133731.5284.14860403.37520-0.505502.830001.86920HepG2HNRNPM
IMPA1ENSG00000133731.5336.46940482.48590-0.520004.682503.91100HepG2HNRNPU
IMPA1ENSG00000133731.5452.32020715.81330-0.662205.557804.63220HepG2IGF2BP2
IMPA1ENSG00000133731.5331.83780492.84400-0.570705.939804.90260HepG2ILF2
IMPA1ENSG00000133731.5496.06480668.87130-0.431202.256101.51380HepG2LARP4
IMPA1ENSG00000133731.5568.53060759.44810-0.417702.508101.88160HepG2MAGOH
IMPA1ENSG00000133731.5561.59600763.68850-0.443502.566801.95690HepG2MATR3
IMPA1ENSG00000133731.5576.48890733.05460-0.346602.720801.96380HepG2NOL12
IMPA1ENSG00000133731.5347.72970477.58320-0.457803.562102.61210HepG2PARN
IMPA1ENSG00000133731.5170.62160264.96150-0.635003.569502.17040HepG2PKM
IMPA1ENSG00000133731.5295.89590430.33950-0.540404.255303.36180HepG2PPIL4
IMPA1ENSG00000133731.5433.08400326.326300.408202.667701.90600HepG2PRPF4
IMPA1ENSG00000133731.5297.26280494.13100-0.733204.130402.65690HepG2PRPF6
IMPA1ENSG00000133731.5518.99250699.75600-0.431103.223102.58620HepG2PUF60
IMPA1ENSG00000133731.5336.97460742.81170-1.1404025.9282024.48850HepG2PUM1
IMPA1ENSG00000133731.5892.78180733.160700.284102.195101.62770HepG2QKI
IMPA1ENSG00000133731.5548.34350753.46260-0.458503.440002.85030HepG2NELFE
IMPA1ENSG00000133731.5554.05400701.83100-0.341102.512701.92210HepG2RECQL
IMPA1ENSG00000133731.5560.56770774.40590-0.466202.513101.75000HepG2RPS3A
IMPA1ENSG00000133731.5614.98760343.701500.839307.734506.50380HepG2RRP9
IMPA1ENSG00000133731.5333.67520429.67730-0.364802.434901.82420HepG2SAFB2
IMPA1ENSG00000133731.5400.21140787.64780-0.976802.885501.49550HepG2SF1
IMPA1ENSG00000133731.5453.06790670.93590-0.566406.991705.95770HepG2SLBP
IMPA1ENSG00000133731.5315.19110501.08010-0.668806.826505.88640HepG2SMN1
IMPA1ENSG00000133731.51033.80730600.654400.783303.347502.48300HepG2SNRNP70
IMPA1ENSG00000133731.5570.90910690.89490-0.275202.037101.49000HepG2SRSF5
IMPA1ENSG00000133731.5520.39210785.74830-0.594508.562707.56950HepG2SUCLG1
IMPA1ENSG00000133731.5444.99540637.00310-0.517502.794001.46010HepG2SUGP2
IMPA1ENSG00000133731.5272.85770468.83940-0.780907.672106.91580HepG2TIAL1
IMPA1ENSG00000133731.5384.80300473.01530-0.297801.872101.39040HepG2TRIM56
IMPA1ENSG00000133731.5917.11800500.076800.874906.839905.86450HepG2U2AF1
IMPA1ENSG00000133731.5533.36350723.58500-0.440002.364101.59490HepG2UBE2L3
IMPA1ENSG00000133731.5375.82350485.77360-0.370202.704102.01200HepG2UPF1
IMPA1ENSG00000133731.5240.43100441.09970-0.875502.625701.91940HepG2XRN2
IMPA1ENSG00000133731.51070.21350749.169200.514407.159906.31040K562AGGF1
IMPA1ENSG00000133731.51290.27440779.541800.726909.816208.48930K562AKAP8L
IMPA1ENSG00000133731.51367.350401040.847900.393502.983702.37790K562AQR
IMPA1ENSG00000133731.51072.29760817.922000.390604.115902.98200K562ATP5C1
IMPA1ENSG00000133731.5753.82510936.10040-0.312402.759501.65610K562CPEB4
IMPA1ENSG00000133731.5405.83130684.78290-0.754808.473507.08620K562CPSF6
IMPA1ENSG00000133731.51228.00810838.859400.549708.181406.53350K562DKC1
IMPA1ENSG00000133731.5522.89780649.59460-0.313002.201901.48630K562EIF3G
IMPA1ENSG00000133731.51143.36190786.917900.538902.594201.91330K562G3BP2
IMPA1ENSG00000133731.5481.50180653.79760-0.441303.121402.28060K562GPKOW
IMPA1ENSG00000133731.5581.17120819.69450-0.496104.468503.51220K562GRSF1
IMPA1ENSG00000133731.5360.24160597.65620-0.730404.348303.61670K562HNRNPC
IMPA1ENSG00000133731.5535.50150875.36250-0.709008.544506.61340K562HNRNPL
IMPA1ENSG00000133731.5542.54870812.79750-0.583106.979505.55740K562HNRNPU
IMPA1ENSG00000133731.51217.17420827.298000.557002.327201.57970K562KIF1C
IMPA1ENSG00000133731.5692.27490967.09440-0.482304.796403.54600K562MATR3
IMPA1ENSG00000133731.51344.97810926.781400.537206.089704.63840K562MBNL1
IMPA1ENSG00000133731.5462.40660639.11490-0.466904.624903.60070K562MTPAP
IMPA1ENSG00000133731.51121.96050649.605800.788306.476504.91480K562NAA15
IMPA1ENSG00000133731.5543.34290710.10440-0.386203.946703.07450K562NSUN2
IMPA1ENSG00000133731.51237.42980941.418500.394303.887803.11320K562PTBP1
IMPA1ENSG00000133731.5898.089401343.82960-0.581405.105303.99970K562PUF60
IMPA1ENSG00000133731.5781.331901429.15810-0.8712015.8370013.21010K562PUM1
IMPA1ENSG00000133731.51882.97930773.110601.2842027.0361025.33110K562PUS1
IMPA1ENSG00000133731.51217.01930753.264000.6920011.1741010.00280K562RBM15
IMPA1ENSG00000133731.5528.86340799.18400-0.595605.572303.05660K562RECQL
IMPA1ENSG00000133731.5421.66780587.65290-0.478902.670801.68720K562RPS3
IMPA1ENSG00000133731.5520.67890700.70620-0.428403.801902.85430K562SF3A3
IMPA1ENSG00000133731.5605.67790818.38890-0.434203.994702.96090K562SF3B4
IMPA1ENSG00000133731.5379.08560567.35050-0.581704.485303.09100K562SRSF4
IMPA1ENSG00000133731.5511.33550934.08760-0.8693010.855309.29660K562TARDBP
IMPA1ENSG00000133731.5713.62450901.00890-0.336402.582501.79470K562TIA1
IMPA1ENSG00000133731.5408.89300547.32180-0.420702.138301.32170K562TRIM56
IMPA1ENSG00000133731.51148.90990762.928400.590502.943901.81100K562U2AF1
IMPA1ENSG00000133731.5572.23030752.93950-0.395903.962603.11590K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for IMPA1 is not available on ENCORE database.





15 RBPs can affect the splicing of IMPA1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEIMPA1ENSG00000133731.5chr8-825884688258851482586075825861848259136082591465-0.256000.000430.01038excludedK562SF3B4
SEIMPA1ENSG00000133731.5chr8-825831738258328282572750825729028258607582586184-0.176000.007260.09830excludedK562SF3B4
SEIMPA1ENSG00000133731.5chr8-825884688258851482586075825861848259136082591465-0.242000.000840.03284excludedK562PRPF8
SEIMPA1ENSG00000133731.5chr8-8258317382583282825727508257290282586075825861840.162000.000090.02008includedK562MATR3
SEIMPA1ENSG00000133731.5chr8-8259799782598198825937328259381982598486825985180.487000.000000.00000includedHepG2U2AF1
SEIMPA1ENSG00000133731.5chr8-825831738258328282572750825729028258607582586184-0.362000.000000.00001excludedHepG2U2AF1
SEIMPA1ENSG00000133731.5chr8-825831738258328282572750825729028258607582586184-0.209000.001380.09683excludedK562XRCC6
SEIMPA1ENSG00000133731.5chr8-825831738258328282572750825729028258607582586184-0.267000.000000.00000excludedHepG2U2AF2
SEIMPA1ENSG00000133731.5chr8-825937328259381982592884825930188259848682598553-0.060000.000030.01290excludedK562METAP2
SEIMPA1ENSG00000133731.5chr8-8259799782598198825937328259381982598486825985180.149000.000280.00420includedK562AQR
SEIMPA1ENSG00000133731.5chr8-825937328259381982592884825930188259848682598545-0.074000.002620.02745excludedK562AQR
SEIMPA1ENSG00000133731.5chr8-825860758258618482572750825729028259848682598550-0.508000.000490.00932excludedK562PUS1
SEIMPA1ENSG00000133731.5chr8-825884688258851482586075825861848259136082591465-0.220000.002370.09495excludedK562EFTUD2
SEIMPA1ENSG00000133731.5chr8-8259799782598198825937328259381982598486825985180.196000.000000.00001includedK562U2AF1
SEIMPA1ENSG00000133731.5chr8-825831738258328282572750825729028258607582586184-0.364000.000000.00000excludedK562U2AF1
SEIMPA1ENSG00000133731.5chr8-825937328259381982592884825930188259848682598553-0.057000.000480.03735excludedK562HNRNPL
SEIMPA1ENSG00000133731.5chr8-8258317382583282825727508257290282586075825861840.177000.000160.00556includedHepG2SRSF1
SEIMPA1ENSG00000133731.5chr8-825869068258706682586130825861848258846882588514-0.051000.003960.07431excludedHepG2SRSF1
SEIMPA1ENSG00000133731.5chr8-825831738258328282572750825729028258607582586184-0.166000.004660.09991excludedHepG2SF3A3
SEIMPA1ENSG00000133731.5chr8-825884688258851482586075825861848259136082591465-0.266000.000290.01726excludedHepG2SF3B4
SEIMPA1ENSG00000133731.5chr8-8259799782598198825937328259381982598486825985180.091000.002850.04644includedK562U2AF2
SEIMPA1ENSG00000133731.5chr8-825937328259381982592884825930188259848682598553-0.127000.000280.01384excludedK562TARDBP
SEIMPA1ENSG00000133731.5chr8-825937328259381982592884825930188259848682598553-0.093000.000000.00024excludedK562SF3B1
A3SSIMPA1ENSG00000133731.5chr8-8258607582586205825860758258618482588468825885000.098000.000240.00191longerK562AQR
A3SSIMPA1ENSG00000133731.5chr8-8259373282593851825937328259381982598486825985360.058000.005820.03304longerK562AQR
MXEIMPA1ENSG00000133731.5chr8-82586075825862058259136082591501825832428258328282592884825930180.082000.005620.039771includedK562AQR
MXEIMPA1ENSG00000133731.5chr8-82588468825885148259136082591501825860758258618482592884825930180.270000.000000.000001includedK562AQR
MXEIMPA1ENSG00000133731.5chr8-82588468825885148259136082591551825860758258618482592884825930180.244000.000000.000001includedK562AQR
MXEIMPA1ENSG00000133731.5chr8-82588468825885148259136082591465825860758258618482592884825930180.217000.000010.000161includedK562AQR
MXEIMPA1ENSG00000133731.5chr8-82583173825832828258607582586205825727508257290282591360825914650.141000.000660.006311includedK562AQR
MXEIMPA1ENSG00000133731.5chr8-8258607582586184825884688258851482572750825729028259136082591465-0.321000.000050.000612includedK562AQR
MXEIMPA1ENSG00000133731.5chr8-8258607582586205825884688258851482572750825729028259136082591465-0.253000.002170.017862includedK562AQR
MXEIMPA1ENSG00000133731.5chr8-82588468825885148259136082591465825860758258618482592884825930180.232000.000780.027451includedK562EFTUD2
MXEIMPA1ENSG00000133731.5chr8-82588468825885148259136082591465825860758258618482592884825930180.277000.000010.000601includedK562SF3B4
MXEIMPA1ENSG00000133731.5chr8-8259136082591465825928848259301882572750825729028259373282593819-0.118000.001710.035472includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for IMPA1 is not avaliable on ENCORE database.