IFRD2

General Information

Gene Name       : IFRD2
Gene ID             : ENSG00000214706.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: IFRD2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878IFRD2ENSG00000214706.1012.0729.9821.02ENCSR000AEF
HepG2IFRD2ENSG00000214706.1059.6534.3246.98ENCSR985KAT
K562IFRD2ENSG00000214706.1042.0035.5238.76ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for IFRD2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • IFRD2 RNA is bound by 14 proteins.  







eCLIP assay for IFRD2 is not avaliable on ENCORE database.





14 proteins are bound to IFRD2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr35032664150326702-3'-UTR,CDS,intron-Distal,intron-Proximal4.832274.97857HepG2AQR
chr35032662750326692-3'-UTR,CDS,intron-Distal,intron-Proximal6.1162414.56966HepG2PRPF8
chr35032596250326043-3'-UTR,CDS,intron-Distal,intron-Proximal4.4792310.26986HepG2PRPF8
chr35032712150327175-3'-UTR,CDS,intron-Distal,intron-Proximal4.314013.93614HepG2AQR
chr35032633250326390-3'-UTR,CDS,intron-Distal,intron-Proximal4.604597.50107K562AQR
chr35032743750327492-3'-UTR,CDS,intron-Distal,intron-Proximal3.415788.31208HepG2PPIG
chr35032553750325596-3'-UTR,intron-Distal,intron-Proximal4.313524.07072K562UCHL5
chr35032586350325929-3'-UTR,CDS,intron-Distal,intron-Proximal4.031184.04622HepG2GRWD1
chr35032678050326823-3'-UTR,CDS,intron-Distal,intron-Proximal5.922739.61799HepG2EFTUD2
chr35032624250326301-3'-UTR,CDS,intron-Distal3.668133.14999HepG2GRWD1
chr35032704150327095-3'-UTR,CDS,intron-Distal,intron-Proximal3.206255.31044HepG2PRPF8
chr35032633650326356-3'-UTR,CDS,intron-Distal3.554934.13746HepG2PPIG
chr35032636050326428-3'-UTR,CDS,intron-Distal,intron-Proximal4.709724.62947HepG2AQR
chr35032731950327383-3'-UTR,CDS,intron-Distal,intron-Proximal3.438588.54207HepG2PRPF8
chr35032584350325919-3'-UTR,CDS,intron-Distal,intron-Proximal3.093996.02430HepG2PPIG
chr35032528750325343-3'-UTR,intron-Distal,intron-Proximal4.233203.43895HepG2LARP4
chr35032714450327181-3'-UTR,CDS,intron-Distal,intron-Proximal3.410645.30777HepG2PPIG
chr35032709550327177-3'-UTR,CDS,intron-Distal,intron-Proximal3.8399023.73881HepG2PRPF8
chr35032632650326378-3'-UTR,CDS,intron-Distal,intron-Proximal3.726115.55508K562BUD13
chr35032540750325505-3'-UTR,intron-Distal,intron-Proximal3.001503.56085K562LSM11
chr35032663550326691-3'-UTR,CDS,intron-Distal,intron-Proximal3.042985.47590K562PRPF8
chr35032716050327196-3'-UTR,CDS,intron-Distal,intron-Proximal5.012856.22530K562AQR
chr35032710150327147-3'-UTR,CDS,intron-Distal,intron-Proximal3.680466.00776K562PRPF8
chr35032973950329838-5'-UTR,CDS,intron-Distal,intron-Proximal3.757983.70637K562DDX3X
chr35032975450329845-5'-UTR,CDS,intron-Distal,intron-Proximal3.344545.22400HepG2DDX3X
chr35032969150329800-5'-UTR,CDS,intron-Distal3.094214.74027K562YBX3
chr35032964250329754-5'-UTR,CDS,intron-Distal,intron-Proximal3.681277.94128HepG2DDX3X
chr35032781050327845-CDS,intron-Distal,intron-Proximal4.157823.36385K562UCHL5
chr35032786550327935-CDS,intron-Distal,intron-Proximal6.0433610.62690HepG2EFTUD2
chr35032786650327914-CDS,intron-Distal,intron-Proximal3.483403.95301K562ZNF622
chr35032781450327850-CDS,intron-Distal,intron-Proximal3.340397.63733HepG2PPIG
chr35032785150327920-CDS,intron-Distal,intron-Proximal4.335204.23351K562BUD13
chr35032785050327868-CDS,intron-Distal3.445257.16988HepG2PPIG
chr35032565050325738-CDS,intron-Distal,intron-Proximal4.007977.16374K562AQR
chr35032731650327336-intron-Distal,intron-Proximal4.784595.26064K562AQR
chr35032660250326681-intron-Distal,intron-Proximal4.823235.29191K562BUD13
chr35032663750326686-intron-Distal,intron-Proximal6.3492317.35737K562AQR
chr35032578150325836-intron-Distal,intron-Proximal4.013905.00478HepG2PCBP2
chr35032581350325829-intron-Distal,intron-Proximal5.072514.35676HepG2PRPF8
chr35032578450325839-intron-Distal,intron-Proximal3.621405.34337K562AQR
chr35032723550327288-intron-Distal,intron-Proximal4.785683.91589K562SF3B4
chr35032752150327564-intron-Distal,intron-Proximal4.675357.61488HepG2EFTUD2
chr35032721150327272-intron-Distal,intron-Proximal3.781983.59805HepG2SF3B4
chr35032733650327359-intron-Distal,intron-Proximal3.831154.89208K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for IFRD2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for IFRD2 is not available on ENCORE database.

  • 97 RBPs can affect the levels of IFRD2.  








The Knockdown/knockout RNA-Seq assay for IFRD2 is not available on ENCORE database.





97 RBPs can affect the gene expression of IFRD2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
IFRD2ENSG00000214706.6840.05680648.796400.372603.996403.29070HepG2ACO1
IFRD2ENSG00000214706.6317.825901150.86360-1.8564066.2521063.77920HepG2AUH
IFRD2ENSG00000214706.6373.99740533.17980-0.511603.003502.06530HepG2BCLAF1
IFRD2ENSG00000214706.6348.30390478.70990-0.458803.098901.79730HepG2BUD13
IFRD2ENSG00000214706.6254.08940375.55010-0.563703.361902.52230HepG2CALR
IFRD2ENSG00000214706.6789.86360648.744700.283902.572201.92670HepG2CKAP4
IFRD2ENSG00000214706.6310.50030461.66470-0.572303.645202.86590HepG2CPSF6
IFRD2ENSG00000214706.6794.77680576.909700.462104.838304.03190HepG2CELF1
IFRD2ENSG00000214706.6544.50580758.30100-0.477802.713602.09290HepG2DDX3X
IFRD2ENSG00000214706.6917.03940651.651300.492802.277101.71130HepG2DDX6
IFRD2ENSG00000214706.6498.17750620.74550-0.317302.292701.66620HepG2DKC1
IFRD2ENSG00000214706.6485.42530337.153900.525704.508803.71170HepG2DNAJC2
IFRD2ENSG00000214706.6208.92550354.36230-0.762202.383301.35980HepG2AGO1
IFRD2ENSG00000214706.6457.53820626.19510-0.452702.097801.57400HepG2EIF2S1
IFRD2ENSG00000214706.6712.53130484.697000.555804.859203.33540HepG2EIF2S2
IFRD2ENSG00000214706.6445.62290673.89230-0.596702.619701.94860HepG2EIF4B
IFRD2ENSG00000214706.6982.857601321.39700-0.427006.460205.60490HepG2ETF1
IFRD2ENSG00000214706.6276.29800502.17950-0.862006.631904.76870HepG2FKBP4
IFRD2ENSG00000214706.6262.75340462.47850-0.815702.707001.70170HepG2FTO
IFRD2ENSG00000214706.6328.99120464.30720-0.497003.190202.35040HepG2FUBP3
IFRD2ENSG00000214706.6465.40610647.73410-0.476902.931602.24810HepG2G3BP1
IFRD2ENSG00000214706.6806.40630565.086400.512907.008605.98100HepG2HNRNPL
IFRD2ENSG00000214706.6299.47800499.40080-0.737705.534704.67590HepG2HNRNPLL
IFRD2ENSG00000214706.6485.69860387.629300.325302.459701.76420HepG2ILF2
IFRD2ENSG00000214706.6458.61470593.13680-0.371103.323502.20760HepG2KIF1C
IFRD2ENSG00000214706.6995.11140696.955300.513703.301802.39190HepG2LARP4
IFRD2ENSG00000214706.6898.00920698.710800.361902.104001.52870HepG2MAGOH
IFRD2ENSG00000214706.6270.13070509.38840-0.915105.462004.07340HepG2MTPAP
IFRD2ENSG00000214706.6312.91220438.46680-0.486703.150401.85170HepG2NAA15
IFRD2ENSG00000214706.6822.89530615.125200.419703.534502.67250HepG2NOL12
IFRD2ENSG00000214706.6277.97390442.83570-0.671804.273503.34940HepG2NSUN2
IFRD2ENSG00000214706.6294.91510640.14600-1.118108.528607.27740HepG2PABPC4
IFRD2ENSG00000214706.6982.38430642.344600.612809.365708.35660HepG2PCBP1
IFRD2ENSG00000214706.6344.72410480.56060-0.479303.408602.55920HepG2PRPF4
IFRD2ENSG00000214706.6300.34970465.36920-0.631704.045303.09150HepG2PRPF8
IFRD2ENSG00000214706.61233.00450623.317300.9840029.5976028.07390HepG2PUM1
IFRD2ENSG00000214706.6444.27960707.88920-0.672107.532006.57740HepG2QKI
IFRD2ENSG00000214706.6473.241601104.43270-1.2227028.7204027.40240HepG2RBM22
IFRD2ENSG00000214706.6431.83050642.44430-0.573105.064904.17870HepG2RBM25
IFRD2ENSG00000214706.6832.43770425.608500.967703.508702.38410HepG2RBM27
IFRD2ENSG00000214706.6424.99540727.40100-0.7753010.530509.60060HepG2NELFE
IFRD2ENSG00000214706.6426.50880309.479000.462602.710602.10040HepG2RPS19
IFRD2ENSG00000214706.6432.56330337.950000.356002.344001.74300HepG2SAFB2
IFRD2ENSG00000214706.6756.24230587.461700.364301.900901.33920HepG2SF3A3
IFRD2ENSG00000214706.6365.52430494.29110-0.435402.406501.74650HepG2SF3B1
IFRD2ENSG00000214706.6577.94080394.114900.552206.056805.16310HepG2SMN1
IFRD2ENSG00000214706.6629.08040369.628100.767102.504401.59660HepG2SMNDC1
IFRD2ENSG00000214706.6213.11240549.99160-1.3678011.293809.72980HepG2SNRNP70
IFRD2ENSG00000214706.6489.262501247.39700-1.3502045.5461044.16000HepG2SRFBP1
IFRD2ENSG00000214706.6822.78840579.752900.505006.021405.15060HepG2SRSF5
IFRD2ENSG00000214706.6493.543201083.00280-1.1338030.4211029.13630HepG2SSB
IFRD2ENSG00000214706.61043.08630659.345000.6617011.8687010.73310HepG2SUCLG1
IFRD2ENSG00000214706.6318.35700435.63620-0.452502.788101.84500HepG2SUPT6H
IFRD2ENSG00000214706.6370.50470600.60160-0.696904.785303.93280HepG2SUPV3L1
IFRD2ENSG00000214706.6477.76360638.40690-0.418202.686002.13320HepG2TAF15
IFRD2ENSG00000214706.6276.33020368.76790-0.416302.388301.91760HepG2TIAL1
IFRD2ENSG00000214706.6557.25370372.031600.582806.314505.52480HepG2TRIM56
IFRD2ENSG00000214706.6839.73730573.645400.549705.321704.06730HepG2TUFM
IFRD2ENSG00000214706.6412.86150551.92720-0.418802.343301.76080HepG2U2AF1
IFRD2ENSG00000214706.6909.13770607.188100.582302.053901.33860HepG2UBE2L3
IFRD2ENSG00000214706.6353.05700520.98740-0.561305.450204.52120HepG2UPF1
IFRD2ENSG00000214706.6665.49700502.994900.403803.665202.99230HepG2UTP3
IFRD2ENSG00000214706.6350.48060474.26950-0.436403.482102.74200HepG2ZC3H8
IFRD2ENSG00000214706.6807.63170616.482100.389503.617202.98420K562AGGF1
IFRD2ENSG00000214706.6941.27480641.467800.553102.544601.91750K562AKAP8L
IFRD2ENSG00000214706.61004.958901338.51630-0.413503.388602.75290K562AQR
IFRD2ENSG00000214706.6865.78800673.035700.363203.157602.17840K562ATP5C1
IFRD2ENSG00000214706.61223.811401584.99030-0.373103.672501.39250K562AUH
IFRD2ENSG00000214706.6271.75970398.15160-0.551003.111102.18430K562BOP1
IFRD2ENSG00000214706.61177.09980956.013300.300002.739301.63930K562CPEB4
IFRD2ENSG00000214706.61345.74420989.230600.443906.353605.42390K562DDX47
IFRD2ENSG00000214706.6846.95930568.120400.576004.359402.25810K562DDX51
IFRD2ENSG00000214706.6530.57350288.350200.8796010.051408.52520K562EIF3G
IFRD2ENSG00000214706.6364.33890547.25250-0.586903.011301.82470K562FKBP4
IFRD2ENSG00000214706.6241.20870430.74760-0.836606.851505.48090K562FMR1
IFRD2ENSG00000214706.6251.45000365.09720-0.538002.856501.92690K562FTO
IFRD2ENSG00000214706.6957.54010689.468300.473705.446004.63670K562FXR1
IFRD2ENSG00000214706.684.91900235.33530-1.470609.201007.75910K562G3BP2
IFRD2ENSG00000214706.6724.01210527.204600.457602.808701.37650K562GEMIN5
IFRD2ENSG00000214706.6428.61000629.86160-0.555404.577203.82750K562HNRNPC
IFRD2ENSG00000214706.6672.00330507.870100.403902.212301.38340K562HNRNPM
IFRD2ENSG00000214706.6200.67060345.13150-0.782304.154902.98920K562KRR1
IFRD2ENSG00000214706.6694.20390453.664500.613606.115704.84670K562MAGOH
IFRD2ENSG00000214706.6623.48430452.695900.461702.713301.80060K562MATR3
IFRD2ENSG00000214706.61375.924001700.66350-0.305702.358301.32010K562MSI2
IFRD2ENSG00000214706.6852.94200518.395800.718306.497004.35750K562NONO
IFRD2ENSG00000214706.6544.933201014.36150-0.8964010.104608.52010K562PCBP3
IFRD2ENSG00000214706.6453.06440778.03150-0.7801010.298808.79850K562POLR2G
IFRD2ENSG00000214706.61042.43680700.944300.572505.071503.90400K562PPIG
IFRD2ENSG00000214706.6735.24210440.787100.738009.030307.87520K562PTBP1
IFRD2ENSG00000214706.6879.01780636.229900.466203.527802.92600K562PUS1
IFRD2ENSG00000214706.6821.76100619.852300.406703.511302.85620K562RBM15
IFRD2ENSG00000214706.6737.99740521.153500.501802.998902.14810K562RPS19
IFRD2ENSG00000214706.6411.95690273.458800.591102.996301.94950K562RPS3
IFRD2ENSG00000214706.6225.48130384.40290-0.769604.646503.36570K562SF3B1
IFRD2ENSG00000214706.6557.60020432.153900.367602.259701.61210K562SRSF1
IFRD2ENSG00000214706.6100.13530231.01100-1.206005.734303.28960K562TAF15
IFRD2ENSG00000214706.6675.32100437.291300.626903.833402.99420K562TARDBP
IFRD2ENSG00000214706.6606.17640421.837000.523004.320903.26440K562TIA1
IFRD2ENSG00000214706.6387.89140543.19500-0.485802.944201.97740K562TIAL1
IFRD2ENSG00000214706.6586.93270414.129100.503003.611202.33360K562TRA2A
IFRD2ENSG00000214706.6139.87490235.61000-0.752304.431403.41990K562U2AF2
IFRD2ENSG00000214706.6397.71070524.28790-0.398602.264401.35220K562UCHL5
IFRD2ENSG00000214706.6896.984601104.41790-0.300103.163202.39750K562UPF1
IFRD2ENSG00000214706.6757.87250945.01470-0.318402.339201.53340K562WDR3
IFRD2ENSG00000214706.6710.04040533.984200.411002.484101.35800K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for IFRD2 is not available on ENCORE database.





10 RBPs can affect the splicing of IFRD2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEIFRD2ENSG00000214706.6chr3-503266855032678750326230503263685032687750327059-0.056000.000760.00975excludedK562AQR
SEIFRD2ENSG00000214706.6chr3-503266855032679150326230503263685032687750327032-0.093000.000380.00750excludedK562PUS1
SEIFRD2ENSG00000214706.6chr3-503278185032790350327600503277255032799050328110-0.092000.000780.05463excludedK562HNRNPUL1
SEIFRD2ENSG00000214706.6chr3-503266855032679150326230503263685032687750327032-0.066000.000930.02602excludedK562AGGF1
SEIFRD2ENSG00000214706.6chr3-503278185032790350327600503277255032799050328110-0.341000.000000.00000excludedK562HNRNPC
A3SSIFRD2ENSG00000214706.6chr3-5032668550326812503266855032679150326877503270320.117000.000300.03150longerHepG2RBM22
A3SSIFRD2ENSG00000214706.6chr3-503255615032576150325561503257365032583950325935-0.761000.000000.00000shorterK562AQR
A3SSIFRD2ENSG00000214706.6chr3-5032668550326807503266855032679150326877503270320.184000.000000.00008longerK562PUS1
RIIFRD2ENSG00000214706.6chr3-503268775032719350326877503270595032714250327193-0.157000.000380.03220excludedK562NONO
RIIFRD2ENSG00000214706.6chr3-5032735950327725503273595032751750327600503277250.419000.000000.00004includedK562PUS1
RIIFRD2ENSG00000214706.6chr3-5032687750327193503268775032705950327142503271930.163000.005510.05436includedHepG2SF3A3
RIIFRD2ENSG00000214706.6chr3-503276005032811050327600503277255032799050328110-0.551000.000070.00327excludedK562HNRNPC
RIIFRD2ENSG00000214706.6chr3-5032735950327725503273595032751750327600503277250.284000.002850.03270includedK562AGGF1
RIIFRD2ENSG00000214706.6chr3-5032687750327193503268775032705950327142503271930.108000.006060.08788includedHepG2IGF2BP3
RIIFRD2ENSG00000214706.6chr3-5032735950327725503273595032751750327600503277250.068000.000050.00111includedHepG2RBM22
RIIFRD2ENSG00000214706.6chr3-5032687750327193503268775032705950327142503271930.370000.000430.00637includedHepG2RBM22
RIIFRD2ENSG00000214706.6chr3-5032735950327725503273595032751750327600503277250.165000.000000.00000includedK562AQR
RIIFRD2ENSG00000214706.6chr3-5032687750327193503268775032705950327142503271930.196000.000210.00165includedK562AQR
RIIFRD2ENSG00000214706.6chr3-503255615032593550325561503257365032583950325935-0.267000.000000.00000excludedK562AQR
RIIFRD2ENSG00000214706.6chr3-503273595032772550327359503275175032760050327725-0.073000.000750.01477excludedK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for IFRD2 is not avaliable on ENCORE database.