HGFAC

General Information

Gene Name       : HGFAC
Gene ID             : ENSG00000109758.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HGFAC)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HGFACENSG00000109758.80.000.000.00ENCSR000AEF
HepG2HGFACENSG00000109758.812.800.446.62ENCSR985KAT
K562HGFACENSG00000109758.80.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HGFAC is not avaliable on ENCORE database.



Proteins bound to RNA
  • HGFAC RNA is bound by 16 proteins.  







eCLIP assay for HGFAC is not avaliable on ENCORE database.





16 proteins are bound to HGFAC RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr434509633450991+CDS,intron-Proximal3.6098712.37971HepG2PABPN1
chr434470513447099+CDS,intron-Proximal3.501057.38162HepG2PPIG
chr434460563446114+CDS3.1330710.58565HepG2PPIG
chr434477933447839+CDS4.3386612.40018HepG2PPIG
chr434499533450003+CDS3.9285916.47827HepG2PABPN1
chr434470753447120+CDS,intron-Proximal3.257136.69747HepG2PRPF8
chr434477193447777+CDS,intron-Proximal4.312069.95156HepG2SF3A3
chr434465653446600+CDS4.478229.85077HepG2PPIG
chr434477783447830+CDS3.338633.67448HepG2UCHL5
chr434466703446705+CDS5.0381211.99167HepG2PPIG
chr434509913451018+CDS3.6010410.04807HepG2PABPN1
chr434492193449244+CDS3.237996.23779HepG2PPIG
chr434476893447770+CDS,intron-Proximal4.1009416.40525HepG2SF3B4
chr434461223446158+CDS3.452437.38586HepG2PPIG
chr434479523448020+CDS3.080726.64308HepG2PPIG
chr434477453447835+CDS,intron-Proximal3.418733.26130HepG2AQR
chr434497433449759+CDS3.560427.01634HepG2PABPN1
chr434496843449732+CDS3.308377.61103HepG2PABPN1
chr434498553449907+CDS4.195449.44807HepG2LSM11
chr434498563449904+CDS3.541309.55732HepG2PABPN1
chr434472233447325+intron-Distal3.4040719.47689HepG2PRPF4
chr434474673447541+intron-Distal,intron-Proximal3.174286.67217HepG2PRPF4
chr434472423447304+intron-Distal3.4786911.49991HepG2SDAD1
chr434474753447560+intron-Distal,intron-Proximal3.387625.73184HepG2RBFOX2
chr434472333447316+intron-Distal4.0983819.32408HepG2PPIG
chr434473583447411+intron-Distal3.118557.06076HepG2PRPF4
chr434472203447286+intron-Distal4.002797.53999HepG2AQR
chr434474893447533+intron-Distal,intron-Proximal3.728107.25961HepG2SF3B4
chr434472293447330+intron-Distal3.8190716.94085HepG2BUD13
chr434472983447336+intron-Distal3.207426.53750HepG2HLTF
chr434474933447548+intron-Distal,intron-Proximal4.409344.52538HepG2PTBP1
chr434475333447575+intron-Distal,intron-Proximal3.141493.87980HepG2EFTUD2
chr434491633449176+intron-Proximal3.984243.18939HepG2RBFOX2
chr434471353447161+intron-Proximal4.587533.80461HepG2RBM15
chr434477173447759+intron-Proximal3.372297.84823HepG2PPIG
chr434469353446983+intron-Proximal4.542015.67400HepG2SF3A3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HGFAC is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HGFAC is not available on ENCORE database.

  • 94 RBPs can affect the levels of HGFAC.  








The Knockdown/knockout RNA-Seq assay for HGFAC is not available on ENCORE database.





94 RBPs can affect the gene expression of HGFAC :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HGFACENSG00000109758.471.78010406.36630-2.501102.342001.35160HepG2AATF
HGFACENSG00000109758.4237.687201243.57180-2.3874032.8999031.36100HepG2ACO1
HGFACENSG00000109758.4199.74440981.02080-2.296102.516402.00700HepG2AKAP1
HGFACENSG00000109758.41327.63510800.544000.7297015.5484014.15380HepG2AUH
HGFACENSG00000109758.4692.97240195.581401.824902.967801.99350HepG2BCCIP
HGFACENSG00000109758.4732.63020169.855502.1087026.9700024.67640HepG2BCLAF1
HGFACENSG00000109758.4525.34440124.524302.076706.052405.20700HepG2BOP1
HGFACENSG00000109758.4704.24560114.303002.6231015.2566013.80150HepG2CPSF6
HGFACENSG00000109758.4456.44430104.173502.1314010.684408.74660HepG2YBX3
HGFACENSG00000109758.4174.21080260.79920-0.582103.322602.63120HepG2CELF1
HGFACENSG00000109758.4783.26740280.434101.4817015.9363014.41000HepG2DAZAP1
HGFACENSG00000109758.4846.486701149.99350-0.442103.380602.47020HepG2DDX19B
HGFACENSG00000109758.4515.97480179.850401.520404.955803.29510HepG2DDX27
HGFACENSG00000109758.4414.45610145.534501.509804.944603.13020HepG2DDX28
HGFACENSG00000109758.4569.28340192.343701.565407.297406.11010HepG2DDX55
HGFACENSG00000109758.41069.04480521.783801.034702.352001.41990HepG2DDX5
HGFACENSG00000109758.4437.5167098.647402.148902.942401.93660HepG2DHX30
HGFACENSG00000109758.42098.756801189.686800.8189013.0001011.75320HepG2DKC1
HGFACENSG00000109758.4745.34190102.271702.8654014.5030012.99450HepG2DNAJC21
HGFACENSG00000109758.4426.80660101.396002.0735019.6981018.10830HepG2DNAJC2
HGFACENSG00000109758.41765.47710775.679001.186402.782602.18750HepG2EIF2S1
HGFACENSG00000109758.4685.03660276.656101.308002.340901.55980HepG2EIF4G1
HGFACENSG00000109758.41664.63850265.020502.650905.200704.10410HepG2EIF4G2
HGFACENSG00000109758.43316.34730919.135901.85110119.06550116.25060HepG2ETF1
HGFACENSG00000109758.4729.964001214.93650-0.735003.078302.20040HepG2EWSR1
HGFACENSG00000109758.4234.36060866.79550-1.887002.582401.83660HepG2FIP1L1
HGFACENSG00000109758.4849.33320114.534402.890402.931501.88510HepG2FTO
HGFACENSG00000109758.4468.08290249.672000.906603.123602.04030HepG2GNB2L1
HGFACENSG00000109758.41068.38080129.524803.0440016.9273015.47290HepG2GPKOW
HGFACENSG00000109758.4389.36250257.721700.595203.704402.64740HepG2HNRNPA2B1
HGFACENSG00000109758.4391.45510135.418001.531309.640706.91740HepG2HNRNPAB
HGFACENSG00000109758.4719.75760197.033601.8690048.9130046.60300HepG2HNRNPF
HGFACENSG00000109758.41394.39960123.612103.4957045.6563043.61120HepG2HNRNPLL
HGFACENSG00000109758.4698.82230114.097602.6146026.3412024.62610HepG2HNRNPU
HGFACENSG00000109758.4937.95650194.020702.2732039.5656037.33390HepG2IGF2BP1
HGFACENSG00000109758.4320.24440116.545301.4582019.0324017.30560HepG2ILF2
HGFACENSG00000109758.4684.91900159.558302.101705.295003.44280HepG2ILF3
HGFACENSG00000109758.4566.00450156.264601.8567011.682909.11400HepG2KHDRBS1
HGFACENSG00000109758.41629.067601136.601600.519207.961406.29710HepG2KIF1C
HGFACENSG00000109758.4359.76550244.666900.556102.882901.72670HepG2LARP7
HGFACENSG00000109758.4427.58390256.810700.735404.974603.33550HepG2LIN28B
HGFACENSG00000109758.41924.08170866.114201.151404.319203.50270HepG2MAGOH
HGFACENSG00000109758.4856.37420126.170202.762804.944003.62400HepG2MTPAP
HGFACENSG00000109758.4613.56930221.214001.471707.942005.56880HepG2NIP7
HGFACENSG00000109758.4653.38040278.077301.232307.998106.72250HepG2NOL12
HGFACENSG00000109758.4540.44100176.856301.611509.349107.30920HepG2NONO
HGFACENSG00000109758.4496.25980109.639602.178208.567107.30310HepG2NSUN2
HGFACENSG00000109758.4724.20410149.648302.2747027.2583024.60420HepG2PABPC1
HGFACENSG00000109758.42309.47120792.726101.542605.850304.81420HepG2PABPC4
HGFACENSG00000109758.41708.513601182.468500.530805.352702.96380HepG2PES1
HGFACENSG00000109758.4842.42910101.764303.0492068.5559065.15140HepG2PPIL4
HGFACENSG00000109758.42057.06490265.446102.9540092.1923089.33550HepG2PUF60
HGFACENSG00000109758.4735.30690281.779201.3837013.4189012.31910HepG2PUM1
HGFACENSG00000109758.4529.33730281.575500.910603.740302.96570HepG2PUM2
HGFACENSG00000109758.431.07200256.99260-3.048003.721902.90830HepG2RAVER1
HGFACENSG00000109758.4565.504601145.83030-1.0188020.0506018.10850HepG2RBM15
HGFACENSG00000109758.4137.47340768.22670-2.4824066.3908064.52330HepG2RBM22
HGFACENSG00000109758.4418.62450295.039400.504602.368201.45860HepG2RBM27
HGFACENSG00000109758.4829.33340239.586101.7913022.4914019.71450HepG2RCC2
HGFACENSG00000109758.4599.57300212.271801.497902.902102.20460HepG2RPLP0
HGFACENSG00000109758.4476.66610252.870600.914502.456701.56670HepG2RPS10
HGFACENSG00000109758.4962.20800272.085601.8222025.2937023.09250HepG2RPS2
HGFACENSG00000109758.41338.91600164.641003.0236067.6223063.84510HepG2RPS3A
HGFACENSG00000109758.4494.73560277.760700.832706.179504.56870HepG2RPS5
HGFACENSG00000109758.41078.40430101.603503.4078095.5951092.89210HepG2SAFB2
HGFACENSG00000109758.4498.54600155.028101.685109.579707.30090HepG2SART3
HGFACENSG00000109758.4439.28420156.195501.491704.548802.59440HepG2SBDS
HGFACENSG00000109758.4603.362201354.41950-1.1666013.9438012.36510HepG2SF3A3
HGFACENSG00000109758.4599.14240122.324602.2921028.7891026.78460HepG2SF3B1
HGFACENSG00000109758.41539.16650254.514102.59620158.83340155.60040HepG2SLBP
HGFACENSG00000109758.4171.15820118.477800.530602.234601.64670HepG2SMN1
HGFACENSG00000109758.4630.61660263.285901.260005.781204.36250HepG2SMNDC1
HGFACENSG00000109758.4791.12230251.261601.654603.203301.48300HepG2SND1
HGFACENSG00000109758.4304.76690867.68220-1.5095026.4602025.32380HepG2SRFBP1
HGFACENSG00000109758.4231.22990872.92630-1.9165010.237509.45610HepG2SRSF1
HGFACENSG00000109758.41085.08890262.085102.0496013.4242012.18650HepG2SRSF5
HGFACENSG00000109758.4820.97300193.583302.0843016.6893015.23170HepG2SRSF7
HGFACENSG00000109758.4324.13720710.24550-1.131705.129704.42000HepG2SRSF9
HGFACENSG00000109758.41630.88970753.350901.1142038.4219037.02770HepG2SSB
HGFACENSG00000109758.4519.39590298.066600.801105.256904.44750HepG2SUCLG1
HGFACENSG00000109758.41168.68700584.487300.999503.779402.69360HepG2SUPT6H
HGFACENSG00000109758.4836.85510191.402502.1283026.7540025.04670HepG2SUPV3L1
HGFACENSG00000109758.4189.14470784.85700-2.052909.089808.16970HepG2TAF15
HGFACENSG00000109758.4698.06170120.607202.5329052.4892050.08860HepG2TARDBP
HGFACENSG00000109758.4328.66270128.246001.357602.236101.33110HepG2TFIP11
HGFACENSG00000109758.4797.73070110.832902.8474012.0748011.15850HepG2TIAL1
HGFACENSG00000109758.4710.74270111.860402.6675054.7001052.61990HepG2TRIM56
HGFACENSG00000109758.4892.03170259.323801.782202.846001.96020HepG2TUFM
HGFACENSG00000109758.41523.61590274.486302.472607.072505.70690HepG2UBE2L3
HGFACENSG00000109758.41778.256701201.166100.5659012.5180011.22950HepG2UPF1
HGFACENSG00000109758.4222.111001159.67390-2.3844095.9874093.26420HepG2UTP3
HGFACENSG00000109758.4980.93900147.489502.7335052.5420048.79590HepG2XPO5
HGFACENSG00000109758.4936.03180188.416902.3125013.7211012.12250HepG2XRN2
HGFACENSG00000109758.4495.02920257.172800.944702.997101.64350HepG2ZRANB2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HGFAC is not available on ENCORE database.





10 RBPs can affect the splicing of HGFAC :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHGFACENSG00000109758.4chr4+3445067344514734447763444873344576534458880.207000.000200.07161includedHepG2BCCIP
SEHGFACENSG00000109758.4chr4+3445067344514734447763444873344576534458880.194000.000570.09147includedHepG2DDX55
SEHGFACENSG00000109758.4chr4+3445067344514734447763444873344576534458880.216000.000040.02220includedHepG2XRN2
SEHGFACENSG00000109758.4chr4+344506734451473444776344487334457653445888-0.156000.001650.08796excludedHepG2SRSF9
A3SSHGFACENSG00000109758.4chr4+3449516344976234496213449762344921834493580.092000.000070.03425longerHepG2HNRNPUL1
A3SSHGFACENSG00000109758.4chr4+3449516344976234496213449762344921834493580.072000.001030.02734longerHepG2U2AF2
A5SSHGFACENSG00000109758.4chr4+3446991344762334469913447077344776834480210.395000.000000.00031longerHepG2HNRNPK
A5SSHGFACENSG00000109758.4chr4+3446991344762334469913447223344776834480210.149000.000020.01238longerHepG2TBRG4
A5SSHGFACENSG00000109758.4chr4+3446991344762334469913447077344776834480210.290000.000140.05184longerHepG2KHSRP
A5SSHGFACENSG00000109758.4chr4+3446991344762334469913447077344776834480210.331000.000040.00932longerHepG2MATR3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HGFAC is not avaliable on ENCORE database.