GIPC2

General Information

Gene Name       : GIPC2
Gene ID             : ENSG00000137960.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GIPC2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GIPC2ENSG00000137960.50.000.020.01ENCSR000AEF
HepG2GIPC2ENSG00000137960.55.2411.038.13ENCSR985KAT
K562GIPC2ENSG00000137960.50.000.010.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GIPC2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GIPC2 RNA is bound by 15 proteins.  







eCLIP assay for GIPC2 is not avaliable on ENCORE database.





15 proteins are bound to GIPC2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr17860148078601537+3'-UTR3.612535.56491HepG2BCLAF1
chr17860319478603280+3'-UTR3.696113.81692HepG2LIN28B
chr17860136278601435+3'-UTR,CDS3.457764.65365HepG2GRWD1
chr17858513278585180+CDS3.567343.68471HepG2BCLAF1
chr17858507378585132+CDS,intron-Proximal4.881363.89826HepG2BCLAF1
chr17851179378511891+CDS,intron-Distal3.423677.52317HepG2GRWD1
chr17845604278456096+intron-Distal4.847527.83570HepG2SUGP2
chr17845466378454741+intron-Distal5.5450311.35201HepG2SUGP2
chr17845180378451926+intron-Distal4.1340312.68275HepG2SUGP2
chr17845211578452259+intron-Distal3.983436.20132HepG2MATR3
chr17845580778455879+intron-Distal5.2287810.57454HepG2SUGP2
chr17848260178482648+3'-UTR,intron-Distal4.143944.37030K562KHSRP
chr17844808078448213+intron-Distal5.3015318.13366HepG2QKI
chr17845212578452272+intron-Distal4.7793816.70440K562PTBP1
chr17847916478479224+CDS,intron-Distal3.848125.71420K562RBM15
chr17844807378448194+intron-Distal4.2161711.84040K562QKI
chr17855760978557669+intron-Distal4.076563.24150HepG2HLTF
chr17845390678453957+intron-Distal3.254014.86332HepG2SUGP2
chr17855167478551763+intron-Distal3.229533.08928HepG2MATR3
chr17844603578446113+intron-Distal,intron-Proximal4.202413.60944K562TARDBP
chr17845211478452209+intron-Distal3.417425.07140HepG2PTBP1
chr17845525778455302+intron-Distal3.568414.35402HepG2SUGP2
chr17845000578450073+intron-Distal3.214333.35377HepG2QKI
chr17847881578478858+CDS,intron-Distal4.6566317.65246K562RBM15
chr17847091078470998+CDS,intron-Distal3.343804.23869K562GRWD1
chr17847640778476546+intron-Distal3.093634.56635K562KHSRP
chr17857272778572891+intron-Distal5.1866314.28299HepG2PTBP1
chr17845503278455113+intron-Distal3.779463.59803HepG2PTBP1
chr17848197878482082+3'-UTR,intron-Distal3.5925816.61712K562PUM2
chr17845535178455425+intron-Distal4.042926.98272HepG2MATR3
chr17845559478455623+intron-Distal4.381215.35792HepG2SUGP2
chr17847903878479097+CDS,intron-Distal4.967596.83406K562RBM15
chr17845415278454219+intron-Distal3.714803.10961HepG2MATR3
chr17852136178521456+intron-Distal3.146473.35050HepG2SUGP2
chr17847079578470863+CDS,intron-Distal3.117853.04831K562RBM15
chr17848265378482751+3'-UTR,intron-Distal3.6195012.29741K562KHSRP
chr17847885878478909+CDS,intron-Distal3.2552610.81702K562RBM15
chr17845468078454762+intron-Distal3.188303.93186HepG2MATR3
chr17860054878600609+intron-Distal4.204315.09344HepG2XPO5
chr17848275178482857+3'-UTR,intron-Distal4.9736110.34143K562QKI
chr17845449978454570+intron-Distal3.185057.22569HepG2SUGP2
chr17845426378454301+intron-Distal3.506185.08575HepG2SUGP2
chr17847103878471125+intron-Distal,intron-Proximal4.195864.23094K562TIA1
chr17845210978452238+intron-Distal4.4986810.68394K562MATR3
chr17845562378455711+intron-Distal4.060276.48659HepG2SUGP2
chr17845216978452255+intron-Distal3.068416.36326HepG2SUGP2
chr17857278278572911+intron-Distal6.2100616.44511HepG2PCBP2
chr17844988578449949+intron-Distal3.338973.84025HepG2SUGP2
chr17857273478572782+intron-Distal4.547463.50841HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GIPC2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GIPC2 is not available on ENCORE database.

  • 104 RBPs can affect the levels of GIPC2.  








The Knockdown/knockout RNA-Seq assay for GIPC2 is not available on ENCORE database.





104 RBPs can affect the gene expression of GIPC2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GIPC2ENSG00000137960.5869.52750668.571500.379002.249901.39660HepG2ABCF1
GIPC2ENSG00000137960.5345.30100757.12390-1.1327024.6700023.26490HepG2ACO1
GIPC2ENSG00000137960.5550.554702048.43200-1.8956035.6244033.99880HepG2AKAP1
GIPC2ENSG00000137960.5978.97890760.755300.363703.920503.01940HepG2AKAP8L
GIPC2ENSG00000137960.51189.677401694.95390-0.510704.598303.59850HepG2ASCC1
GIPC2ENSG00000137960.5387.56980904.76580-1.223108.508306.79850HepG2CCAR1
GIPC2ENSG00000137960.52062.147401610.307300.356702.787202.01200HepG2CIRBP
GIPC2ENSG00000137960.5903.90330757.048600.255702.366201.74330HepG2CKAP4
GIPC2ENSG00000137960.51392.83710647.776401.1044010.256308.81310HepG2CNOT7
GIPC2ENSG00000137960.5499.65660386.090700.371902.433701.42210HepG2CSTF2
GIPC2ENSG00000137960.5430.64120836.19330-0.9574017.3432016.00930HepG2CELF1
GIPC2ENSG00000137960.51223.56070899.183300.444307.005605.90520HepG2DAZAP1
GIPC2ENSG00000137960.5877.21810700.272200.324903.506302.58120HepG2DDX19B
GIPC2ENSG00000137960.5997.21490578.490400.785509.807808.61420HepG2DDX21
GIPC2ENSG00000137960.5859.68340565.853200.603306.299204.92470HepG2DDX24
GIPC2ENSG00000137960.52684.986101962.346900.452204.035303.29130HepG2DDX3X
GIPC2ENSG00000137960.5728.09650509.164000.515904.161402.59060HepG2DDX47
GIPC2ENSG00000137960.5969.06110605.931600.677306.992505.44720HepG2DDX5
GIPC2ENSG00000137960.5540.762001685.45150-1.6401031.0322029.29610HepG2DDX6
GIPC2ENSG00000137960.5690.21360482.951400.515104.225203.02500HepG2DHX30
GIPC2ENSG00000137960.5898.15200724.385500.310102.773602.09550HepG2DKC1
GIPC2ENSG00000137960.5850.378501620.50870-0.9303012.8181011.60340HepG2EIF2S1
GIPC2ENSG00000137960.5304.21340507.24430-0.737606.187304.49720HepG2EIF2S2
GIPC2ENSG00000137960.5208.58810430.16560-1.044208.490906.98990HepG2EIF3D
GIPC2ENSG00000137960.51085.286001790.97030-0.722707.541706.48730HepG2EIF4A3
GIPC2ENSG00000137960.5946.154301743.53630-0.881908.475507.30530HepG2EIF4B
GIPC2ENSG00000137960.51270.72370849.737500.580504.006203.03920HepG2EIF4G2
GIPC2ENSG00000137960.5956.932801257.43280-0.394004.815004.06150HepG2ETF1
GIPC2ENSG00000137960.5375.19970675.11750-0.847506.953905.79040HepG2FIP1L1
GIPC2ENSG00000137960.5754.10640511.371300.560304.613903.00980HepG2FKBP4
GIPC2ENSG00000137960.5764.05300463.862400.719902.631501.64160HepG2FTO
GIPC2ENSG00000137960.5764.340801806.65790-1.2410022.7194020.95010HepG2FXR1
GIPC2ENSG00000137960.5968.078401676.12740-0.791909.244408.06440HepG2G3BP1
GIPC2ENSG00000137960.5175.35620383.01480-1.1271010.123308.47710HepG2GEMIN5
GIPC2ENSG00000137960.5406.55380599.58810-0.560502.756901.64600HepG2GRSF1
GIPC2ENSG00000137960.5357.77810505.51750-0.498703.320302.62040HepG2HNRNPA1
GIPC2ENSG00000137960.51099.43150826.341400.411804.746003.57310HepG2HNRNPA2B1
GIPC2ENSG00000137960.5434.89560562.30500-0.370702.045001.43840HepG2HNRNPC
GIPC2ENSG00000137960.5438.211201696.79350-1.9531042.7942040.33640HepG2HNRNPK
GIPC2ENSG00000137960.5786.66720500.930100.651005.637704.77260HepG2HNRNPLL
GIPC2ENSG00000137960.5269.04050465.85970-0.792106.809505.41640HepG2HNRNPM
GIPC2ENSG00000137960.5766.98060558.586600.457305.269104.45340HepG2HNRNPU
GIPC2ENSG00000137960.5637.75950470.255100.439503.443102.64230HepG2IGF2BP1
GIPC2ENSG00000137960.5944.171201703.81350-0.8516011.4468010.17250HepG2IGF2BP2
GIPC2ENSG00000137960.5941.607201598.68700-0.763703.431502.33640HepG2IGF2BP3
GIPC2ENSG00000137960.5441.86150642.91060-0.541003.827102.48570HepG2LARP7
GIPC2ENSG00000137960.51022.470401807.28700-0.8218010.574609.31990HepG2MAGOH
GIPC2ENSG00000137960.51266.968901817.46010-0.520504.254703.48840HepG2MATR3
GIPC2ENSG00000137960.5242.06590450.22600-0.895204.343403.04030HepG2METAP2
GIPC2ENSG00000137960.5758.27880546.487400.472403.899702.94380HepG2MSI2
GIPC2ENSG00000137960.5829.50460510.903000.699103.932302.76550HepG2MTPAP
GIPC2ENSG00000137960.5713.66260891.62460-0.321202.703201.94840HepG2NOL12
GIPC2ENSG00000137960.5353.13550563.84690-0.675102.465601.43840HepG2NONO
GIPC2ENSG00000137960.5680.74500444.176800.615904.860603.87950HepG2NSUN2
GIPC2ENSG00000137960.5961.984201656.95130-0.784409.443608.12920HepG2PABPC4
GIPC2ENSG00000137960.5321.65520552.89230-0.781509.559108.14060HepG2PARN
GIPC2ENSG00000137960.5978.999101511.69600-0.6268012.6005011.45440HepG2PCBP1
GIPC2ENSG00000137960.5619.52250498.212800.314302.235601.56620HepG2PPIL4
GIPC2ENSG00000137960.5574.83990433.366100.407503.479002.62180HepG2PRPF4
GIPC2ENSG00000137960.51101.84900474.141401.2164019.3471017.49590HepG2PRPF8
GIPC2ENSG00000137960.5558.119501538.17550-1.4626054.5601052.81410HepG2PTBP1
GIPC2ENSG00000137960.52271.51380851.114201.4161030.7640029.06470HepG2PUF60
GIPC2ENSG00000137960.5694.35100903.47250-0.379804.970104.22230HepG2PUM1
GIPC2ENSG00000137960.5614.78480902.82670-0.554406.212005.22140HepG2PUM2
GIPC2ENSG00000137960.5449.69960654.96740-0.542502.280901.63660HepG2RAVER1
GIPC2ENSG00000137960.5588.56740857.48020-0.542905.552804.38900HepG2RBM15
GIPC2ENSG00000137960.5521.811701050.98680-1.0101020.3428019.20350HepG2RBM22
GIPC2ENSG00000137960.51206.898001511.93080-0.325102.899202.21140HepG2RBM25
GIPC2ENSG00000137960.5928.268301711.86800-0.8830023.8479022.57160HepG2NELFE
GIPC2ENSG00000137960.5816.882001594.32460-0.9647027.4704025.88660HepG2RECQL
GIPC2ENSG00000137960.5739.65500514.457500.523704.137503.32920HepG2RPLP0
GIPC2ENSG00000137960.51079.52180643.252700.746805.331504.04300HepG2RPS10
GIPC2ENSG00000137960.5924.07860650.134600.507202.994002.16320HepG2RPS3A
GIPC2ENSG00000137960.51149.88180712.402000.690604.574902.59640HepG2RTF1
GIPC2ENSG00000137960.5704.27100497.440000.501505.861504.97890HepG2SAFB2
GIPC2ENSG00000137960.5464.98350764.64590-0.717605.069604.13770HepG2SF3A3
GIPC2ENSG00000137960.5995.78400495.816701.0059014.2438012.77450HepG2SF3B1
GIPC2ENSG00000137960.51390.545001601.49610-0.203802.002101.48590HepG2SF3B4
GIPC2ENSG00000137960.51136.92870816.038900.478307.457006.39070HepG2SLBP
GIPC2ENSG00000137960.5484.69840580.08900-0.259201.849101.30560HepG2SMN1
GIPC2ENSG00000137960.5260.56480667.45160-1.3570014.9074012.64700HepG2SMNDC1
GIPC2ENSG00000137960.52098.569901671.592000.328104.666204.09230HepG2SRSF1
GIPC2ENSG00000137960.5614.53260840.32390-0.451505.238404.41950HepG2SRSF5
GIPC2ENSG00000137960.5640.05070469.185700.447904.250803.41580HepG2SRSF7
GIPC2ENSG00000137960.5684.621301359.90910-0.9901028.8230027.40510HepG2SRSF9
GIPC2ENSG00000137960.51800.860501030.667400.8050023.2125022.04500HepG2SSB
GIPC2ENSG00000137960.5490.40670685.93640-0.484102.956601.63170HepG2SSRP1
GIPC2ENSG00000137960.5654.34970451.017400.536802.761001.52550HepG2STAU1
GIPC2ENSG00000137960.5724.44210955.70320-0.399705.057304.25930HepG2SUCLG1
GIPC2ENSG00000137960.5970.50960694.611000.482402.917001.55310HepG2SUGP2
GIPC2ENSG00000137960.5421.68500611.60130-0.536401.910001.33360HepG2SUPV3L1
GIPC2ENSG00000137960.51019.953501502.42770-0.558809.185808.25980HepG2TAF15
GIPC2ENSG00000137960.51090.442701380.59460-0.340403.098302.21940HepG2TIA1
GIPC2ENSG00000137960.5771.59330542.732900.507504.880804.25530HepG2TIAL1
GIPC2ENSG00000137960.5341.74740547.62570-0.680307.887107.01290HepG2TRIM56
GIPC2ENSG00000137960.5818.05740577.571200.502103.698202.97520HepG2U2AF1
GIPC2ENSG00000137960.5371.206701040.89280-1.487505.974804.47390HepG2U2AF2
GIPC2ENSG00000137960.5123.95710361.34290-1.543509.831608.40200HepG2UCHL5
GIPC2ENSG00000137960.51027.76470678.124500.5998010.112708.92410HepG2UPF1
GIPC2ENSG00000137960.5541.48600697.01340-0.364303.112202.00760HepG2UTP18
GIPC2ENSG00000137960.5332.60170654.70180-0.9770015.4763014.23090HepG2UTP3
GIPC2ENSG00000137960.5942.57570582.308800.694704.686803.24580HepG2XPO5
GIPC2ENSG00000137960.5845.95410427.657800.984006.008605.07880HepG2ZC3H8
GIPC2ENSG00000137960.5458.55160745.80640-0.7017011.5523010.62460HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GIPC2 is not available on ENCORE database.





3 RBPs can affect the splicing of GIPC2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGIPC2ENSG00000137960.5chr1+7855844078558660785463587854654478560635785608160.177000.000000.00000includedHepG2PTBP1
SEGIPC2ENSG00000137960.5chr1+785850767858518378546358785465447859156478591646-0.114000.000310.02032excludedHepG2PTBP1
SEGIPC2ENSG00000137960.5chr1+7856063578560816785463587854654478585076785851830.087000.000050.00614includedHepG2TIAL1
SEGIPC2ENSG00000137960.5chr1+7856063578560816785463587854654478585076785851830.075000.001530.05972includedHepG2HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GIPC2 is not avaliable on ENCORE database.