FAM171A2

General Information

Gene Name       : FAM171A2
Gene ID             : ENSG00000161682.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM171A2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM171A2ENSG00000161682.140.000.090.04ENCSR000AEF
HepG2FAM171A2ENSG00000161682.143.840.552.19ENCSR985KAT
K562FAM171A2ENSG00000161682.141.750.781.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM171A2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM171A2 RNA is bound by 8 proteins.  







eCLIP assay for FAM171A2 is not avaliable on ENCORE database.





8 proteins are bound to FAM171A2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174243067842430735-3'-UTR,intron-Distal6.048497.49093K562PABPC4
chr174243068042430796-3'-UTR,intron-Distal4.175165.38267K562DDX55
chr174243064442430745-3'-UTR,intron-Distal3.919305.33371HepG2DDX55
chr174243063842430748-3'-UTR,intron-Distal4.767888.06526K562DDX6
chr174243078042430873-3'-UTR,intron-Distal4.073993.16434HepG2LARP4
chr174243078342430912-3'-UTR,intron-Distal4.974069.14311K562PUM2
chr174243065542430743-3'-UTR,intron-Distal3.260784.74431HepG2LARP4
chr174244098242441118-5'-UTR,CDS,intron-Distal5.7715621.14542HepG2DDX3X
chr174244111842441197-5'-UTR,intron-Distal,intron-Proximal5.1902310.84022HepG2DDX3X
chr174243727842437362-CDS,intron-Distal5.6644913.66432K562YBX3
chr174244040542440486-intron-Distal4.154874.04290K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM171A2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM171A2 is not available on ENCORE database.

  • 87 RBPs can affect the levels of FAM171A2.  








The Knockdown/knockout RNA-Seq assay for FAM171A2 is not available on ENCORE database.





87 RBPs can affect the gene expression of FAM171A2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM171A2ENSG00000161682.10477.11230266.165500.841906.081904.56950HepG2AKAP8
FAM171A2ENSG00000161682.10256.30960171.184900.582203.359402.52410HepG2AKAP8L
FAM171A2ENSG00000161682.10349.26470210.263500.732002.796802.10750HepG2AUH
FAM171A2ENSG00000161682.1063.59220200.01170-1.653202.924902.13040HepG2CIRBP
FAM171A2ENSG00000161682.10277.53430170.347200.704105.089204.23760HepG2CKAP4
FAM171A2ENSG00000161682.10114.5959069.579900.719702.509101.89170HepG2CELF1
FAM171A2ENSG00000161682.1027.0832078.68740-1.538704.935804.05650HepG2DDX21
FAM171A2ENSG00000161682.1035.1083077.06540-1.134303.033402.07580HepG2DDX24
FAM171A2ENSG00000161682.10695.86360209.509701.731704.025703.29170HepG2DDX6
FAM171A2ENSG00000161682.1085.32990163.01220-0.933904.576003.74330HepG2DKC1
FAM171A2ENSG00000161682.10202.1717057.692301.8090010.486809.18890HepG2DNAJC21
FAM171A2ENSG00000161682.10166.6363057.196801.542605.809404.91620HepG2DNAJC2
FAM171A2ENSG00000161682.10121.31940245.28830-1.015705.482402.88680HepG2EIF3H
FAM171A2ENSG00000161682.1073.91240222.28700-1.588502.838202.19140HepG2EIF4A3
FAM171A2ENSG00000161682.10274.35680166.495900.720502.100201.37370HepG2EWSR1
FAM171A2ENSG00000161682.10122.95610203.90690-0.729803.557302.67130HepG2FUBP3
FAM171A2ENSG00000161682.10274.28450162.668500.753605.682804.33650HepG2HDGF
FAM171A2ENSG00000161682.10205.40970119.934500.776204.485203.59620HepG2HNRNPF
FAM171A2ENSG00000161682.10187.2222068.143201.458008.424907.30760HepG2HNRNPL
FAM171A2ENSG00000161682.10192.2711064.362901.578703.269902.61470HepG2HNRNPU
FAM171A2ENSG00000161682.10114.0249065.743700.794303.117002.34250HepG2ILF2
FAM171A2ENSG00000161682.10227.50060155.752900.546502.975801.92290HepG2KIF1C
FAM171A2ENSG00000161682.10525.51310279.038400.913204.987403.85920HepG2LARP4
FAM171A2ENSG00000161682.10140.5817068.102201.045502.991501.81180HepG2LARP7
FAM171A2ENSG00000161682.10158.9730074.180701.099605.934404.82030HepG2NOL12
FAM171A2ENSG00000161682.1096.4457041.882801.203303.409801.80590HepG2NOLC1
FAM171A2ENSG00000161682.10178.7522057.832201.627903.929402.61020HepG2NONO
FAM171A2ENSG00000161682.10140.1202040.766201.781104.648202.19450HepG2NUFIP2
FAM171A2ENSG00000161682.10170.0822057.405701.5669011.311509.87750HepG2PPIL4
FAM171A2ENSG00000161682.10169.3107070.813801.257507.137106.23500HepG2PUF60
FAM171A2ENSG00000161682.10131.7771075.174100.809703.550402.89600HepG2PUM1
FAM171A2ENSG00000161682.10300.9104075.117902.0020023.3105021.47850HepG2PUM2
FAM171A2ENSG00000161682.10125.94700173.54830-0.462501.828301.30530HepG2PUS1
FAM171A2ENSG00000161682.10454.93990260.650300.803506.947605.67310HepG2RBM15
FAM171A2ENSG00000161682.10342.38380201.774500.762805.699405.02350HepG2RBM22
FAM171A2ENSG00000161682.10306.06660213.574300.519002.244401.74720HepG2NELFE
FAM171A2ENSG00000161682.10112.5501057.315200.973503.885003.14360HepG2SAFB2
FAM171A2ENSG00000161682.10172.4766067.903801.344709.279708.11470HepG2SLBP
FAM171A2ENSG00000161682.10165.5116066.834701.308206.118505.22110HepG2SMN1
FAM171A2ENSG00000161682.1039.1757098.66060-1.332502.760601.98060HepG2SNRNP70
FAM171A2ENSG00000161682.1034.76860208.54820-2.5845023.5038022.41990HepG2SRSF1
FAM171A2ENSG00000161682.10160.0992069.920901.195105.220804.40310HepG2SRSF5
FAM171A2ENSG00000161682.1076.92500197.86860-1.3630010.116609.25440HepG2SSB
FAM171A2ENSG00000161682.10265.9319079.517101.7416019.2064017.80390HepG2SUCLG1
FAM171A2ENSG00000161682.1049.45670187.45080-1.9223014.5647013.42740HepG2TAF15
FAM171A2ENSG00000161682.10126.29740283.62850-1.167205.336203.89440HepG2TBRG4
FAM171A2ENSG00000161682.10144.2962062.523101.206503.822503.25550HepG2TIAL1
FAM171A2ENSG00000161682.10182.0500063.100701.5285011.8008010.75360HepG2TRIM56
FAM171A2ENSG00000161682.10181.4755069.185601.391106.834805.36420HepG2TUFM
FAM171A2ENSG00000161682.1080.76800256.18660-1.665305.299804.44590HepG2U2AF1
FAM171A2ENSG00000161682.10253.1166073.234201.789109.503007.90980HepG2UBE2L3
FAM171A2ENSG00000161682.10320.14200200.232600.676905.228404.31680HepG2UPF1
FAM171A2ENSG00000161682.10315.59070205.805500.616704.185102.93010HepG2UTP18
FAM171A2ENSG00000161682.10114.47300193.31550-0.756003.588702.92150HepG2UTP3
FAM171A2ENSG00000161682.10148.80450220.21650-0.565503.040602.47460HepG2ZNF622
FAM171A2ENSG00000161682.10292.59820196.984300.570703.163102.56300K562AGGF1
FAM171A2ENSG00000161682.1083.2567034.759501.260103.750002.62400K562BCLAF1
FAM171A2ENSG00000161682.10193.17480126.603500.609502.530701.47430K562CPEB4
FAM171A2ENSG00000161682.1067.1734030.550501.136602.794802.00870K562CPSF6
FAM171A2ENSG00000161682.1077.0246026.370301.546304.521503.12330K562CSTF2
FAM171A2ENSG00000161682.10129.24900213.22360-0.722203.606402.49170K562CELF1
FAM171A2ENSG00000161682.10161.4414082.073500.975904.900103.46020K562DDX3X
FAM171A2ENSG00000161682.10101.4135054.549500.894502.864501.99960K562FIP1L1
FAM171A2ENSG00000161682.1045.6694089.16590-0.965302.994402.36830K562FXR1
FAM171A2ENSG00000161682.101.1235011.41920-3.345402.178101.56120K562G3BP2
FAM171A2ENSG00000161682.1070.5856030.862601.193402.766901.34860K562GEMIN5
FAM171A2ENSG00000161682.1062.0592029.163101.089402.347801.61510K562GPKOW
FAM171A2ENSG00000161682.10175.6088087.181601.010202.080201.41810K562GRSF1
FAM171A2ENSG00000161682.10134.4957073.945300.862903.076402.23950K562HSPD1
FAM171A2ENSG00000161682.1098.2426031.068201.660806.046104.28050K562IGF2BP2
FAM171A2ENSG00000161682.10133.1310064.416601.047203.096201.45550K562LSM11
FAM171A2ENSG00000161682.10341.70060243.672700.487703.031102.07050K562MBNL1
FAM171A2ENSG00000161682.1076.2279030.377901.327203.514202.01700K562NONO
FAM171A2ENSG00000161682.10167.0917077.622901.106003.507002.35410K562PABPN1
FAM171A2ENSG00000161682.10199.3288092.285901.110903.698101.93170K562PPP1R8
FAM171A2ENSG00000161682.10114.5882064.696800.824602.339701.51400K562PSIP1
FAM171A2ENSG00000161682.10123.27380201.24650-0.707103.371302.18830K562PUM1
FAM171A2ENSG00000161682.10269.96820198.060600.446702.254601.71000K562RBM15
FAM171A2ENSG00000161682.1086.3869030.499401.501905.738504.47400K562RBM22
FAM171A2ENSG00000161682.10174.3317086.543901.010203.153001.72760K562SFPQ
FAM171A2ENSG00000161682.10122.8797055.998301.133704.225302.88010K562SRFBP1
FAM171A2ENSG00000161682.1072.1317029.930401.268903.233601.44880K562SRP68
FAM171A2ENSG00000161682.1066.1115031.143101.085902.622701.93210K562SRSF1
FAM171A2ENSG00000161682.1074.6894029.396401.345203.652102.41280K562SRSF5
FAM171A2ENSG00000161682.1064.8565028.976901.162202.484601.52670K562SUPV3L1
FAM171A2ENSG00000161682.1046.0720089.82700-0.963303.017302.15550K562SYNCRIP
FAM171A2ENSG00000161682.1074.6097031.532801.242403.702002.87890K562TARDBP
FAM171A2ENSG00000161682.1092.2953030.413301.601504.723903.61010K562TIA1
FAM171A2ENSG00000161682.1091.6232029.811501.619705.970804.22480K562TRA2A
FAM171A2ENSG00000161682.10132.4324066.157601.001203.748802.61770K562TRIM56
FAM171A2ENSG00000161682.10223.09530145.339400.618103.262901.87900K562TROVE2
FAM171A2ENSG00000161682.1085.8659030.681301.484604.516903.18430K562UCHL5
FAM171A2ENSG00000161682.10196.29730128.095900.615702.739401.45820K562WRN
FAM171A2ENSG00000161682.1085.8879031.262201.457903.925802.38480K562XRN2
FAM171A2ENSG00000161682.10183.00820121.699900.588502.517601.70210K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM171A2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of FAM171A2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for FAM171A2 is not avaliable on ENCORE database.