DUSP13

General Information

Gene Name       : DUSP13
Gene ID             : ENSG00000079393.20
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DUSP13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DUSP13ENSG00000079393.200.000.040.02ENCSR000AEF
HepG2DUSP13ENSG00000079393.202.140.981.56ENCSR985KAT
K562DUSP13ENSG00000079393.2010.986.288.63ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DUSP13 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DUSP13 RNA is bound by 4 proteins.  







eCLIP assay for DUSP13 is not avaliable on ENCORE database.





4 proteins are bound to DUSP13 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr107685425676854341-3'-UTR,intron-Distal,intron-Proximal4.016163.20319K562UPF1
chr107685534576855477-3'-UTR,CDS,intron-Distal,intron-Proximal3.452104.49055K562YBX3
chr107685757276857688-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.006213.01994K562BUD13
chr107685763676857696-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.8809624.25629K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DUSP13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DUSP13 is not available on ENCORE database.

  • 96 RBPs can affect the levels of DUSP13.  








The Knockdown/knockout RNA-Seq assay for DUSP13 is not available on ENCORE database.





96 RBPs can affect the gene expression of DUSP13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DUSP13ENSG00000079393.1669.7183012.521802.477009.162008.18640HepG2ACO1
DUSP13ENSG00000079393.16116.6522025.120602.215208.829307.93960HepG2AKAP1
DUSP13ENSG00000079393.1659.5350012.395602.263805.987704.48770HepG2AKAP8
DUSP13ENSG00000079393.1653.2239012.579202.080905.672104.60960HepG2AKAP8L
DUSP13ENSG00000079393.1690.7774020.781102.127008.008706.70980HepG2ASCC1
DUSP13ENSG00000079393.1674.7507027.357801.450004.435403.60220HepG2AUH
DUSP13ENSG00000079393.1667.5556018.910901.836804.675503.53220HepG2BCLAF1
DUSP13ENSG00000079393.16115.4771020.994002.4595011.191609.25700HepG2CCAR1
DUSP13ENSG00000079393.1669.3412019.744801.812105.061504.03420HepG2CIRBP
DUSP13ENSG00000079393.1673.6247013.391102.458802.647801.90000HepG2CNOT7
DUSP13ENSG00000079393.1646.9994012.252701.939403.698702.91570HepG2CPSF6
DUSP13ENSG00000079393.16119.8755020.965602.5153015.8807014.59010HepG2CELF1
DUSP13ENSG00000079393.16118.6586021.401602.470909.876208.52160HepG2DDX55
DUSP13ENSG00000079393.16231.2514020.684103.4828017.7652016.38080HepG2DDX6
DUSP13ENSG00000079393.1663.2377014.000802.175207.045105.96380HepG2DNAJC21
DUSP13ENSG00000079393.1650.4108019.863801.343502.582402.00930HepG2EIF2S1
DUSP13ENSG00000079393.1642.293907.013502.592103.836502.78320HepG2EIF3D
DUSP13ENSG00000079393.16155.3249031.416302.3056015.2533014.02430HepG2ETF1
DUSP13ENSG00000079393.1666.712309.913702.750406.286605.17260HepG2FIP1L1
DUSP13ENSG00000079393.1649.256004.649703.405008.578406.72650HepG2FUS
DUSP13ENSG00000079393.16180.0273020.548703.131009.349208.16190HepG2G3BP1
DUSP13ENSG00000079393.1645.3830011.874801.934103.827102.62610HepG2GNB2L1
DUSP13ENSG00000079393.1647.2534012.402201.929704.137002.77950HepG2GRSF1
DUSP13ENSG00000079393.1653.0809020.715701.357403.235402.23590HepG2HNRNPA2B1
DUSP13ENSG00000079393.1674.9359020.529201.867907.067806.03530HepG2HNRNPL
DUSP13ENSG00000079393.1646.5850015.616701.576703.607402.92370HepG2HNRNPU
DUSP13ENSG00000079393.1647.0312013.482201.802503.465402.08540HepG2HSPD1
DUSP13ENSG00000079393.1648.1996020.881801.206702.203101.59210HepG2IGF2BP2
DUSP13ENSG00000079393.1640.2109012.791601.652303.126701.84200HepG2KHDRBS1
DUSP13ENSG00000079393.1637.4083011.638401.684402.766201.63120HepG2LARP7
DUSP13ENSG00000079393.1635.269808.005002.139403.123902.26690HepG2MSI2
DUSP13ENSG00000079393.1652.9594019.657701.429702.443701.42220HepG2NONO
DUSP13ENSG00000079393.16116.2428012.249403.2463011.250309.43890HepG2PABPC1
DUSP13ENSG00000079393.1647.2573020.301701.218802.244601.58910HepG2PABPC4
DUSP13ENSG00000079393.1636.4361013.912901.388802.415701.83930HepG2PCBP1
DUSP13ENSG00000079393.16105.4712014.159202.8969015.7116014.61180HepG2PTBP1
DUSP13ENSG00000079393.1673.8258021.335601.790805.997105.16320HepG2PUF60
DUSP13ENSG00000079393.1694.7510022.650302.0645010.403409.40810HepG2PUM1
DUSP13ENSG00000079393.16106.1807022.632702.2299011.066209.77340HepG2PUM2
DUSP13ENSG00000079393.1671.9486012.754102.495909.471708.44590HepG2PUS1
DUSP13ENSG00000079393.1656.7176015.329801.887404.733303.94850HepG2QKI
DUSP13ENSG00000079393.1632.279904.245002.926704.148803.29350HepG2RAVER1
DUSP13ENSG00000079393.16109.5813026.257002.061109.311108.48820HepG2RBM22
DUSP13ENSG00000079393.1631.668106.850202.208703.245102.22320HepG2SERBP1
DUSP13ENSG00000079393.1650.6214016.221601.641702.467001.85470HepG2SMN1
DUSP13ENSG00000079393.16105.906504.339204.6091024.3454021.42490HepG2SMNDC1
DUSP13ENSG00000079393.16107.5701029.654101.858908.419007.67510HepG2SRFBP1
DUSP13ENSG00000079393.1642.3528015.384301.460902.571602.11130HepG2SRSF1
DUSP13ENSG00000079393.1662.8743021.067701.577304.723003.94220HepG2SRSF5
DUSP13ENSG00000079393.16181.8779012.517403.8609039.0005037.39580HepG2SRSF9
DUSP13ENSG00000079393.167.9762025.74310-1.690402.290501.81420HepG2SSB
DUSP13ENSG00000079393.1621.891803.967602.463902.432501.30900HepG2SUB1
DUSP13ENSG00000079393.1677.0930023.958201.686006.029205.17520HepG2SUCLG1
DUSP13ENSG00000079393.16144.9933021.303302.7667013.1403011.84770HepG2SUPV3L1
DUSP13ENSG00000079393.1650.8042013.832701.876804.680903.98220HepG2TAF15
DUSP13ENSG00000079393.1631.8206012.705401.324402.124501.39040HepG2TIA1
DUSP13ENSG00000079393.1646.5322015.181901.615803.520202.96980HepG2TIAL1
DUSP13ENSG00000079393.1645.3730015.309701.567303.611902.98590HepG2TRIM56
DUSP13ENSG00000079393.1624.424703.635302.748102.394901.48560HepG2U2AF2
DUSP13ENSG00000079393.1655.5830022.067501.332602.334101.57020HepG2UBE2L3
DUSP13ENSG00000079393.1673.405009.803702.9044011.8605010.59730HepG2UPF1
DUSP13ENSG00000079393.1646.6435010.075402.210702.375501.39420HepG2UTP18
DUSP13ENSG00000079393.1637.860404.670403.019005.124003.70880HepG2XRCC6
DUSP13ENSG00000079393.16243.3482010.781904.4962056.8603055.21100HepG2ZNF622
DUSP13ENSG00000079393.1661.55050120.89340-0.973903.130801.86650K562AARS
DUSP13ENSG00000079393.16400.37630290.268400.463902.337401.73570K562AKAP8L
DUSP13ENSG00000079393.1692.0585037.749001.286003.870202.83740K562BOP1
DUSP13ENSG00000079393.16270.63620139.519900.955806.589204.66700K562CIRBP
DUSP13ENSG00000079393.16201.5357084.913701.246905.750004.15760K562CNOT7
DUSP13ENSG00000079393.16126.9282040.128301.661204.371303.38670K562CPSF6
DUSP13ENSG00000079393.16241.47830129.721700.896405.669503.89480K562DDX21
DUSP13ENSG00000079393.16316.52350184.191700.781005.797304.23070K562DDX3X
DUSP13ENSG00000079393.1681.71670146.51630-0.842403.749703.00710K562DDX47
DUSP13ENSG00000079393.16179.8876078.967801.187704.382003.21660K562EFTUD2
DUSP13ENSG00000079393.1640.0868092.54470-1.207003.115302.04100K562EIF3A
DUSP13ENSG00000079393.16193.6127084.487901.196304.170602.86900K562EIF3D
DUSP13ENSG00000079393.16202.54690134.717700.588202.743201.48280K562EXOSC5
DUSP13ENSG00000079393.16126.0432049.638801.344306.394405.06820K562FIP1L1
DUSP13ENSG00000079393.1655.70600114.94640-1.045103.011501.82470K562FKBP4
DUSP13ENSG00000079393.1669.99620200.12760-1.5156011.3588010.22020K562FXR1
DUSP13ENSG00000079393.1610.5610056.95840-2.431206.675005.47300K562G3BP2
DUSP13ENSG00000079393.16131.2590038.304901.776708.784307.36260K562GPKOW
DUSP13ENSG00000079393.16598.00610147.600402.0184032.8752030.16120K562GRSF1
DUSP13ENSG00000079393.16320.29520132.131401.2773010.863209.74470K562HNRNPC
DUSP13ENSG00000079393.1654.42200130.01460-1.256405.190903.45690K562HNRNPK
DUSP13ENSG00000079393.16137.7649067.279401.033903.621602.71580K562HSPD1
DUSP13ENSG00000079393.16249.78250129.779500.944503.549801.42680K562IGF2BP1
DUSP13ENSG00000079393.16218.97930130.184300.750103.284902.13340K562IGF2BP2
DUSP13ENSG00000079393.1671.5207037.393100.935502.120301.35260K562METAP2
DUSP13ENSG00000079393.16273.17450112.716801.2770012.0800010.52580K562MTPAP
DUSP13ENSG00000079393.16166.5351077.962201.094904.738002.91120K562NONO
DUSP13ENSG00000079393.16256.03860125.210801.031907.032605.92170K562NSUN2
DUSP13ENSG00000079393.16147.9303081.577300.858602.728901.50430K562PABPC1
DUSP13ENSG00000079393.16211.26700115.281400.873802.607901.65390K562PABPN1
DUSP13ENSG00000079393.16176.0448074.855101.233706.014303.27530K562PES1
DUSP13ENSG00000079393.16138.2916056.370701.294606.604205.24090K562PPIG
DUSP13ENSG00000079393.16275.71960137.017601.008703.551801.82860K562PPP1R8
DUSP13ENSG00000079393.16202.92560132.922000.610302.962302.27740K562PTBP1
DUSP13ENSG00000079393.16215.07730123.592300.799204.815303.76540K562SF3A3
DUSP13ENSG00000079393.16167.0945076.796301.121505.185302.87820K562SRP68
DUSP13ENSG00000079393.16200.13990123.068500.701403.394602.21050K562SRSF5
DUSP13ENSG00000079393.16223.32260115.766500.947806.360904.57700K562SRSF7
DUSP13ENSG00000079393.16211.3201074.322601.507509.095507.20060K562SUPV3L1
DUSP13ENSG00000079393.1663.25770131.83850-1.059504.570803.50740K562SYNCRIP
DUSP13ENSG00000079393.16231.38270131.879200.811002.544301.86420K562TARDBP
DUSP13ENSG00000079393.16148.1588067.799201.127703.618601.69240K562TFIP11
DUSP13ENSG00000079393.16211.23430127.212800.731503.684102.72140K562TIA1
DUSP13ENSG00000079393.1629.9727056.98090-0.926802.040901.35240K562U2AF2
DUSP13ENSG00000079393.16268.2045078.702001.7688014.4818012.10150K562UCHL5
DUSP13ENSG00000079393.16360.34880132.765901.4404018.3452016.67270K562UPF1
DUSP13ENSG00000079393.16297.94650113.600001.3910013.9469011.93200K562WDR3
DUSP13ENSG00000079393.16221.5777080.204801.466007.890805.55820K562XRN2
DUSP13ENSG00000079393.16445.31180243.317800.871904.692003.52480K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DUSP13 is not available on ENCORE database.





5 RBPs can affect the splicing of DUSP13 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDUSP13ENSG00000079393.16chr10-7686162476861719768574697685764376868766768689430.506000.000090.00298includedK562SRSF1
SEDUSP13ENSG00000079393.16chr10-7686541876865626768636517686385576868766768689640.523000.000200.08298includedK562TIA1
SEDUSP13ENSG00000079393.16chr10-7686162476861719768574697685764376868766768689430.304000.012230.09528includedK562AQR
SEDUSP13ENSG00000079393.16chr10-7686162476861719768574697685764376868766768689430.349000.000940.09824includedK562LARP4
SEDUSP13ENSG00000079393.16chr10-7686365176863855768616247686171976868766768689480.315000.001000.04025includedK562PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DUSP13 is not avaliable on ENCORE database.