DGCR6L

General Information

Gene Name : DGCR6L
Gene ID : ENSG00000128185.9
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DGCR6L)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DGCR6L	ENSG00000128185.9	0.95	5.51	3.23	ENCSR000AEF
HepG2	DGCR6L	ENSG00000128185.9	21.54	6.39	13.96	ENCSR985KAT
K562	DGCR6L	ENSG00000128185.9	48.05	27.14	37.59	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DGCR6L is not avaliable on ENCORE database.

Proteins bound to RNA

DGCR6L RNA is bound by 10 proteins.

CanvasJS.com

eCLIP assay for DGCR6L is not avaliable on ENCORE database.

10 proteins are bound to DGCR6L RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	20302261	20302315	-	3'-UTR,CDS,intron-Distal	4.10761	15.29480	K562	YBX3
chr22	20307161	20307182	-	CDS,intron-Distal,intron-Proximal	5.47553	13.55038	K562	YBX3
chr22	20303721	20303742	-	CDS,intron-Distal	5.29559	11.99287	K562	YBX3
chr22	20302233	20302324	-	3'-UTR,CDS,intron-Distal	4.17349	10.84373	K562	METAP2
chr22	20302928	20302950	-	3'-UTR,CDS,intron-Distal	4.43267	10.66391	K562	YBX3
chr22	20302920	20302928	-	3'-UTR,CDS,intron-Distal	5.20558	10.22679	K562	YBX3
chr22	20302222	20302263	-	3'-UTR,CDS,intron-Distal	3.35083	9.25119	K562	LIN28B
chr22	20307272	20307304	-	CDS,intron-Distal	3.03565	7.04063	K562	YBX3
chr22	20307450	20307553	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.09272	6.02664	K562	DDX3X
chr22	20301899	20301951	-	3'-UTR,intron-Distal,intron-Proximal	5.07473	5.94584	K562	PABPC4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 24 entries

eCLIP assay for DGCR6L is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DGCR6L is not available on ENCORE database.
98 RBPs can affect the levels of DGCR6L.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DGCR6L is not available on ENCORE database.

98 RBPs can affect the gene expression of DGCR6L :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DGCR6L	ENSG00000128185.5	469.96080	145.45750	1.69180	24.04800	22.52730	HepG2	PUF60
DGCR6L	ENSG00000128185.5	1330.59110	369.78490	1.84720	22.44130	20.14340	K562	RPS19
DGCR6L	ENSG00000128185.5	1481.20760	695.52620	1.09050	20.19730	18.59400	K562	DDX47
DGCR6L	ENSG00000128185.5	680.64650	327.55840	1.05510	15.14630	13.11380	K562	TIA1
DGCR6L	ENSG00000128185.5	758.95150	358.35760	1.08250	15.19360	13.04740	K562	FIP1L1
DGCR6L	ENSG00000128185.5	99.84630	272.37930	-1.44780	13.35930	12.26460	HepG2	TAF15
DGCR6L	ENSG00000128185.5	955.12910	485.83460	0.97510	13.28530	11.58720	K562	HSPD1
DGCR6L	ENSG00000128185.5	820.61710	406.82970	1.01220	13.71600	11.46250	K562	PPIG
DGCR6L	ENSG00000128185.5	2109.74060	1343.11880	0.65140	12.63470	10.69630	K562	EIF4G2
DGCR6L	ENSG00000128185.5	625.54750	255.76030	1.29020	10.66960	9.79060	HepG2	SSB
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 106 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DGCR6L is not available on ENCORE database.

11 RBPs can affect the splicing of DGCR6L :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	DGCR6L	ENSG00000128185.5	chr22	-	20303641	20303742	20302858	20302999	20307161	20307322	-0.17700	0.00000	0.00008	excluded	K562	HNRNPA1
SE	DGCR6L	ENSG00000128185.5	chr22	-	20303641	20303742	20302858	20302999	20307161	20307322	-0.24200	0.00000	0.00000	excluded	K562	HNRNPL
SE	DGCR6L	ENSG00000128185.5	chr22	-	20303641	20303742	20302858	20302999	20307161	20307322	0.11000	0.00000	0.00014	included	K562	EIF4G2
SE	DGCR6L	ENSG00000128185.5	chr22	-	20303641	20303742	20302858	20302999	20307161	20307237	-0.49500	0.00000	0.00000	excluded	K562	HNRNPC
SE	DGCR6L	ENSG00000128185.5	chr22	-	20303641	20303742	20302858	20302999	20307161	20307322	-0.10000	0.00007	0.00184	excluded	K562	PUS1
SE	DGCR6L	ENSG00000128185.5	chr22	-	20303641	20303742	20302858	20302999	20307161	20307322	-0.15100	0.00008	0.00500	excluded	K562	FXR1
SE	DGCR6L	ENSG00000128185.5	chr22	-	20303641	20303742	20302858	20302999	20307161	20307322	0.08400	0.00014	0.08210	included	K562	PUM2
SE	DGCR6L	ENSG00000128185.5	chr22	-	20303641	20303742	20302858	20302999	20307161	20307322	-0.07600	0.00227	0.05189	excluded	K562	AGGF1
SE	DGCR6L	ENSG00000128185.5	chr22	-	20303641	20303742	20302858	20302999	20307161	20307322	-0.10500	0.00359	0.03541	excluded	K562	AQR
SE	DGCR6L	ENSG00000128185.5	chr22	-	20303641	20303742	20302858	20302999	20307161	20307322	-0.06800	0.00373	0.08970	excluded	K562	UTP18

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DGCR6L

General Information

Functions

Localization

Domains (AlphaFold: DGCR6L)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DGCR6L is not avaliable on ENCORE database.

10 proteins are bound to DGCR6L RNA:

eCLIP assay for DGCR6L is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DGCR6L is not available on ENCORE database.

98 RBPs can affect the gene expression of DGCR6L :

The Knockdown/knockout RNA-Seq assay for DGCR6L is not available on ENCORE database.

11 RBPs can affect the splicing of DGCR6L :

The Knockdown/knockout RNA-Seq assay for DGCR6L is not avaliable on ENCORE database.