BCAP29

General Information

Gene Name       : BCAP29
Gene ID             : ENSG00000075790.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BCAP29)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BCAP29ENSG00000075790.1045.4739.7842.62ENCSR000AEF
HepG2BCAP29ENSG00000075790.1012.6626.5919.62ENCSR985KAT
K562BCAP29ENSG00000075790.1088.3192.3990.35ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BCAP29 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BCAP29 RNA is bound by 13 proteins.  







eCLIP assay for BCAP29 is not avaliable on ENCORE database.





13 proteins are bound to BCAP29 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7107260475107260527+3'-UTR,intron-Distal5.291188.14577HepG2LIN28B
chr7107253831107253885+3'-UTR,CDS,intron-Proximal4.292397.27704K562ZNF622
chr7107224404107224470+3'-UTR,5'-UTR,CDS,intron-Proximal4.347433.85435K562PRPF8
chr7107260557107260597+3'-UTR,intron-Distal3.556914.23488K562FAM120A
chr7107260649107260744+3'-UTR,intron-Distal3.719705.32141K562UPF1
chr7107253776107253895+3'-UTR,CDS,intron-Proximal3.636093.68471HepG2BCLAF1
chr7107260840107260871+3'-UTR,intron-Distal3.600463.95400K562UPF1
chr7107260454107260541+3'-UTR,intron-Distal5.6485245.89385K562LIN28B
chr7107260661107260716+3'-UTR,intron-Distal3.365095.27637K562FAM120A
chr7107253841107253878+3'-UTR,CDS,intron-Proximal3.201326.35478K562YBX3
chr7107240871107240962+3'-UTR,5'-UTR,CDS,intron-Proximal3.317304.34695HepG2BCLAF1
chr7107260556107260597+3'-UTR,intron-Distal4.567924.46422K562UPF1
chr7107253772107253833+3'-UTR,CDS,intron-Proximal3.611165.91739K562UCHL5
chr7107259228107259310+3'-UTR,intron-Distal6.0579557.41177K562PUM2
chr7107259399107259433+3'-UTR,intron-Distal4.100163.21228K562TIA1
chr7107240849107240990+3'-UTR,5'-UTR,CDS,intron-Proximal3.354149.41308K562UCHL5
chr7107221201107221217+5'-UTR,intron-Distal,intron-Proximal5.1138912.67847K562DDX3X
chr7107234412107234490+5'-UTR,CDS,intron-Distal3.062317.09333K562YBX3
chr7107236321107236383+5'-UTR,CDS3.2828410.15545K562YBX3
chr7107220689107220747+5'-UTR,intron-Proximal4.9100813.46932K562DDX3X
chr7107220687107220748+5'-UTR,intron-Proximal6.008958.23278HepG2DDX3X
chr7107221217107221279+CDS,intron-Distal3.232978.60695K562DDX3X
chr7107253912107253989+intron-Distal,intron-Proximal3.023433.51696K562KHSRP
chr7107245999107246059+intron-Distal4.441784.39969K562TARDBP
chr7107246122107246146+intron-Distal5.058778.06678K562TARDBP
chr7107224489107224678+intron-Distal,intron-Proximal3.483205.35459K562KHSRP
chr7107246059107246091+intron-Distal3.612424.90204K562TARDBP
chr7107234644107234694+intron-Distal,intron-Proximal3.676914.95247K562PRPF8
chr7107246092107246122+intron-Distal4.5958411.06924K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BCAP29 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BCAP29 is not available on ENCORE database.

  • 82 RBPs can affect the levels of BCAP29.  








The Knockdown/knockout RNA-Seq assay for BCAP29 is not available on ENCORE database.





82 RBPs can affect the gene expression of BCAP29 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BCAP29ENSG00000075790.6553.47270355.725900.637605.011703.61010HepG2AATF
BCAP29ENSG00000075790.6854.68670422.431101.0166022.2065020.85730HepG2ACO1
BCAP29ENSG00000075790.61549.05210601.566301.3645021.1683019.84220HepG2AKAP1
BCAP29ENSG00000075790.6522.24930342.959300.606604.046902.79310HepG2AKAP8
BCAP29ENSG00000075790.6537.96360424.407800.342002.466201.73690HepG2AKAP8L
BCAP29ENSG00000075790.6443.88120639.48800-0.526703.944603.24260HepG2BOP1
BCAP29ENSG00000075790.6825.21120536.292100.621604.052303.14220HepG2CALR
BCAP29ENSG00000075790.6670.02720472.899400.502603.427002.57210HepG2CIRBP
BCAP29ENSG00000075790.61086.85410669.681000.6985011.6189010.47790HepG2CELF1
BCAP29ENSG00000075790.6493.23800720.14820-0.546007.368706.24330HepG2DAZAP1
BCAP29ENSG00000075790.6517.01710392.636500.396902.253801.63360HepG2DDX21
BCAP29ENSG00000075790.61305.36440576.278401.1795017.9282016.48130HepG2DDX3X
BCAP29ENSG00000075790.6475.02540710.40430-0.580607.071605.84490HepG2EIF4G1
BCAP29ENSG00000075790.61056.39040790.442200.418305.150404.37630HepG2ETF1
BCAP29ENSG00000075790.6548.61960402.189700.447802.584601.35290HepG2FKBP4
BCAP29ENSG00000075790.6803.90400492.226600.707606.174705.19900HepG2G3BP1
BCAP29ENSG00000075790.6465.21820665.50420-0.516503.233702.54630HepG2GPKOW
BCAP29ENSG00000075790.6827.00720661.799800.321402.607301.69740HepG2HNRNPA2B1
BCAP29ENSG00000075790.6808.92520635.103000.348902.057501.50610HepG2HNRNPLL
BCAP29ENSG00000075790.6346.42740447.00740-0.367702.831502.09170HepG2ILF2
BCAP29ENSG00000075790.6660.51950405.353300.704306.683005.47900HepG2MSI2
BCAP29ENSG00000075790.6730.07110546.325000.418202.491101.88860HepG2NCBP2
BCAP29ENSG00000075790.6642.49890521.245200.301602.279701.77330HepG2PTBP1
BCAP29ENSG00000075790.6550.68210430.272100.355902.833502.21260HepG2PUS1
BCAP29ENSG00000075790.6688.74740564.485900.286901.852601.32620HepG2QKI
BCAP29ENSG00000075790.61302.88630466.453001.4818014.9473013.43420HepG2RAVER1
BCAP29ENSG00000075790.6739.44980571.805200.370802.750601.89600HepG2RBM15
BCAP29ENSG00000075790.61091.86860660.665700.7247011.7726010.85760HepG2RBM22
BCAP29ENSG00000075790.6722.60000580.082100.316802.453101.93850HepG2NELFE
BCAP29ENSG00000075790.6598.46450368.756600.698505.019503.99430HepG2RRP9
BCAP29ENSG00000075790.6707.38520520.072700.443702.439001.80750HepG2SF3A3
BCAP29ENSG00000075790.6452.60410628.62560-0.474003.210902.45370HepG2SF3B1
BCAP29ENSG00000075790.6510.08470653.53840-0.357503.336402.57740HepG2SLBP
BCAP29ENSG00000075790.61320.73590699.456600.916903.410602.53800HepG2SNRNP70
BCAP29ENSG00000075790.6941.49420746.201800.335303.548703.00320HepG2SRFBP1
BCAP29ENSG00000075790.6807.93160566.425200.512205.822805.20000HepG2SRSF1
BCAP29ENSG00000075790.6852.54430672.993600.341101.992501.45030HepG2SRSF5
BCAP29ENSG00000075790.6577.78960460.827600.326202.498801.96810HepG2SRSF9
BCAP29ENSG00000075790.6720.44210435.873600.724904.429402.89950HepG2SUB1
BCAP29ENSG00000075790.6946.69300765.404700.306602.893302.26040HepG2SUCLG1
BCAP29ENSG00000075790.6659.93570481.016500.456102.576401.92110HepG2SUPV3L1
BCAP29ENSG00000075790.6746.01200509.158900.551006.011405.23770HepG2TAF15
BCAP29ENSG00000075790.6359.58470619.03300-0.783707.317506.21420HepG2TARDBP
BCAP29ENSG00000075790.6649.86810428.466200.600904.231003.46280HepG2U2AF1
BCAP29ENSG00000075790.6619.60690445.296000.476504.041403.33710HepG2UTP3
BCAP29ENSG00000075790.6740.32730458.445900.691302.744501.48680HepG2XRCC5
BCAP29ENSG00000075790.6768.74220512.839900.583903.428802.24980HepG2XRCC6
BCAP29ENSG00000075790.6315.35510473.50770-0.586403.308002.52010HepG2XRN2
BCAP29ENSG00000075790.6424.09110326.561100.376902.540701.89230HepG2ZC3H8
BCAP29ENSG00000075790.6860.97110507.260000.7631014.8086013.79250HepG2ZNF622
BCAP29ENSG00000075790.61794.689301284.446500.482505.413803.70110K562AARS
BCAP29ENSG00000075790.61917.096002419.85060-0.336003.024902.34120K562AKAP8L
BCAP29ENSG00000075790.62301.300402825.14570-0.295902.424901.86960K562AQR
BCAP29ENSG00000075790.61201.340301935.93060-0.688408.889707.27170K562BOP1
BCAP29ENSG00000075790.61993.155102901.98310-0.542003.035701.91560K562CNOT7
BCAP29ENSG00000075790.62223.720202648.66910-0.252302.830601.71030K562CPEB4
BCAP29ENSG00000075790.61408.073302058.41770-0.547807.842606.51130K562CPSF6
BCAP29ENSG00000075790.6909.593801186.07990-0.382903.961602.66650K562CSTF2
BCAP29ENSG00000075790.65030.736603955.192300.346905.517904.13650K562CELF1
BCAP29ENSG00000075790.61096.458401370.10020-0.321402.722001.68810K562DDX3X
BCAP29ENSG00000075790.63558.496102740.644700.376707.309506.31930K562DDX47
BCAP29ENSG00000075790.63150.532602603.981700.274802.812101.93020K562DKC1
BCAP29ENSG00000075790.61010.220501353.35220-0.421903.301202.29860K562EFTUD2
BCAP29ENSG00000075790.61125.65970742.281800.600603.348902.23400K562EIF3A
BCAP29ENSG00000075790.61090.877701431.41900-0.392003.499402.58030K562EIF4A3
BCAP29ENSG00000075790.6988.268401289.07280-0.383404.219402.73940K562EIF4B
BCAP29ENSG00000075790.63735.013803217.292300.215202.938901.97150K562EIF4G2
BCAP29ENSG00000075790.6988.375001249.48440-0.338203.080701.69850K562EWSR1
BCAP29ENSG00000075790.61577.509002179.34990-0.466203.001902.11630K562FIP1L1
BCAP29ENSG00000075790.62566.034201654.353000.633204.658503.68840K562G3BP2
BCAP29ENSG00000075790.61400.091901965.25680-0.489205.705204.56910K562GPKOW
BCAP29ENSG00000075790.61568.993401840.24580-0.230102.082701.30850K562HNRNPU
BCAP29ENSG00000075790.61267.078801678.15120-0.405402.343501.49340K562KRR1
BCAP29ENSG00000075790.6995.136301918.32080-0.9469018.7818016.43080K562METAP2
BCAP29ENSG00000075790.64364.591403518.906600.310603.163301.55750K562NOL12
BCAP29ENSG00000075790.61675.612602066.05240-0.302205.724904.70610K562NSUN2
BCAP29ENSG00000075790.61154.306902045.98090-0.825804.416903.08920K562PABPN1
BCAP29ENSG00000075790.61892.045702473.80050-0.386802.778201.95600K562PPIG
BCAP29ENSG00000075790.6997.755001260.28290-0.337002.189801.39330K562PSIP1
BCAP29ENSG00000075790.64351.844103510.401700.309903.005102.15380K562PUF60
BCAP29ENSG00000075790.64809.016203733.204000.365203.967402.66890K562PUM1
BCAP29ENSG00000075790.62027.729302338.27880-0.205601.827501.32770K562RBM15
BCAP29ENSG00000075790.61847.412201346.656000.456003.032601.63740K562RRP9
BCAP29ENSG00000075790.61128.473101871.65600-0.729902.828401.60730K562SF1
BCAP29ENSG00000075790.61747.368402038.54620-0.222402.299001.55000K562SF3A3
BCAP29ENSG00000075790.61441.139601720.90620-0.256002.148001.39550K562SF3B4
BCAP29ENSG00000075790.61645.054801222.368600.428405.157204.02850K562SYNCRIP
BCAP29ENSG00000075790.6978.680801287.66810-0.395903.397802.33050K562TRIM56
BCAP29ENSG00000075790.61927.584302190.67280-0.184602.103901.47060K562UPF1
BCAP29ENSG00000075790.62478.330001949.190700.346402.850501.99130K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BCAP29 is not available on ENCORE database.





19 RBPs can affect the splicing of BCAP29 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.291000.000010.00332includedK562FTO
SEBCAP29ENSG00000075790.6chr7+107254098107254177107253776107253877107258772107259109-0.058000.005120.07545excludedK562SF3B4
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.113000.000450.03233includedHepG2RBM22
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.091000.001180.08666includedK562XRCC6
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.069000.000110.03726includedK562PUM1
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.122000.000370.08314includedK562WDR43
SEBCAP29ENSG00000075790.6chr7+1072567051072568341072537761072538771072587721072590800.313000.000030.00065includedHepG2U2AF2
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.305000.000210.05380includedK562METAP2
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.077000.003070.09040includedK562FXR1
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.161000.000000.00103includedK562SUPV3L1
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.120000.000240.07562includedK562UCHL5
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.404000.000020.00321includedHepG2FTO
SEBCAP29ENSG00000075790.6chr7+1072556901072557261072537761072538771072587721072598910.064000.000450.01184includedK562U2AF1
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.108000.000000.00069includedK562PUM2
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.161000.000480.07346includedK562SRSF7
SEBCAP29ENSG00000075790.6chr7+1072567051072568341072537761072538771072587721072590800.089000.000040.00136includedK562U2AF2
SEBCAP29ENSG00000075790.6chr7+1072212031072213091072207051072207461072243261072244270.056000.003380.05327includedK562U2AF2
SEBCAP29ENSG00000075790.6chr7+107221090107221309107220716107220746107224326107224427-0.064000.001530.03765excludedK562RBM15
SEBCAP29ENSG00000075790.6chr7+1072540981072541771072537761072538771072587721072591090.429000.000000.00000includedK562CPSF6
MXEBCAP29ENSG00000075790.6chr7+107234399107234550107236311107236447107224326107224427107240841107240950-0.121000.000180.024802includedK562PUM1
MXEBCAP29ENSG00000075790.6chr7+107234399107234550107236311107236447107224326107224427107240841107240950-0.147000.000540.047222includedK562RBFOX2
MXEBCAP29ENSG00000075790.6chr7+107234399107234550107236311107236447107224326107224427107240841107240950-0.165000.000030.002082includedK562DHX30
MXEBCAP29ENSG00000075790.6chr7+1072343991072345501072363111072364471072243261072244271072408411072409500.119000.001040.028811includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BCAP29 is not avaliable on ENCORE database.