ARIH1

General Information

Gene Name       : ARIH1
Gene ID             : ENSG00000166233.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ARIH1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARIH1ENSG00000166233.1423.8623.2323.55ENCSR000AEF
HepG2ARIH1ENSG00000166233.1431.2131.3031.26ENCSR985KAT
K562ARIH1ENSG00000166233.1428.5125.2626.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ARIH1Ribo-STAMP-293TshRNABGRSLV03-7,BGRSLV03-8BGRSLV03-1,BGRSLV03-2NotSatisfiedENCORE2
ARIH1Ribo-STAMP-293TshRNAARIH1-BGRSLV07-5,ARIH1-BGRSLV07-6NT-BGRSLV07-1,NT-BGRSLV07-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARIH1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARIH1 RNA is bound by 36 proteins.  







eCLIP assay for ARIH1 is not avaliable on ENCORE database.





36 proteins are bound to ARIH1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr157287689972876976+3'-UTR3.005496.81759K562UPF1
chr157287726372877309+3'-UTR3.134114.96117K562YBX3
chr157287882172878857+3'-UTR3.584374.14074K562UPF1
chr157287637372876433+3'-UTR4.060389.67707K562FAM120A
chr157284819072848288+3'-UTR,CDS,intron-Distal,intron-Proximal3.977366.35873K562PRPF8
chr157287815972878217+3'-UTR3.029165.00311K562UPF1
chr157287817672878219+3'-UTR4.138084.55095K562YBX3
chr157287647772876511+3'-UTR3.213143.80983K562TIA1
chr157287318672873276+3'-UTR,CDS,intron-Proximal3.218326.28688K562UCHL5
chr157287602572876106+3'-UTR4.175154.54113K562IGF2BP2
chr157287726572877378+3'-UTR4.138023.72865HepG2LIN28B
chr157287867572878821+3'-UTR5.2570524.97285K562UPF1
chr157287331872873382+3'-UTR,CDS,intron-Distal,intron-Proximal5.355588.04585HepG2PRPF8
chr157287808972878133+3'-UTR4.140384.77486K562YBX3
chr157284769772847799+3'-UTR,CDS,intron-Distal,intron-Proximal5.527318.88118K562AQR
chr157287769472877739+3'-UTR3.868943.54770K562IGF2BP1
chr157287813372878176+3'-UTR3.960243.65750K562YBX3
chr157287640672876434+3'-UTR3.175153.88579K562IGF2BP2
chr157287594572876001+3'-UTR3.986883.45860K562TIA1
chr157287874872878817+3'-UTR3.615907.70943K562FAM120A
chr157287764172877697+3'-UTR3.130964.20369HepG2PCBP2
chr157287678572876805+3'-UTR3.938573.54514K562TIA1
chr157287726572877315+3'-UTR5.6620714.82377K562LIN28B
chr157287442372874518+3'-UTR,CDS4.904325.23259HepG2BCLAF1
chr157287624372876300+3'-UTR3.9412625.52798K562PUM2
chr157285386472853890+3'-UTR,CDS3.581884.94406K562YBX3
chr157284762072847702+3'-UTR,CDS,intron-Distal3.393147.33138HepG2BCLAF1
chr157287756572877641+3'-UTR3.572275.54538HepG2PCBP2
chr157287621072876243+3'-UTR3.300103.65035K562PUM2
chr157287730972877420+3'-UTR3.6495011.46502K562YBX3
chr157287881772878860+3'-UTR4.948546.04270K562FAM120A
chr157287305672873119+3'-UTR,CDS,intron-Proximal3.102786.51847HepG2U2AF2
chr157276667872766760+5'-UTR3.078905.66280HepG2GRWD1
chr157276668272766807+5'-UTR4.464234.78731HepG2NCBP2
chr157276675472766909+5'-UTR3.282216.57476HepG2ZNF800
chr157276668672766848+5'-UTR3.4368119.83821K562PUM1
chr157285574272855788+CDS,intron-Distal5.7783356.15204K562YBX3
chr157285578872855825+CDS,intron-Distal3.152518.45630K562YBX3
chr157276704472767081+CDS4.070803.59941K562UCHL5
chr157283706772837196+CDS,intron-Distal,intron-Proximal4.060149.48825HepG2U2AF2
chr157276703872767127+CDS3.951295.14253HepG2GRWD1
chr157285573472855742+CDS,intron-Distal,intron-Proximal3.936867.28749K562YBX3
chr157286444572864516+CDS,intron-Distal,intron-Proximal3.974137.28307HepG2BCLAF1
chr157283717172837305+CDS,intron-Distal3.319346.88650HepG2GRWD1
chr157276712672767179+CDS3.094594.14618K562ZNF622
chr157281040672810466+CDS,intron-Proximal3.107183.79741HepG2GRWD1
chr157276723472767294+CDS3.941836.04229K562RBM15
chr157276728072767353+CDS3.5989210.46928K562PUM1
chr157286259472862651+CDS,intron-Distal,intron-Proximal3.452036.74947HepG2BCLAF1
chr157285940372859460+CDS,intron-Distal,intron-Proximal4.249155.63851K562SF3B4
chr157285581072855868+CDS,intron-Distal,intron-Proximal4.588364.68690HepG2PRPF8
chr157285944672859519+CDS,intron-Distal,intron-Proximal3.089064.30396K562UCHL5
chr157276729372767422+CDS,intron-Proximal3.173816.07405HepG2GRWD1
chr157276709372767163+CDS3.597285.42118K562GRWD1
chr157283724972837305+CDS,intron-Distal4.056568.51000K562YBX3
chr157286252572862594+CDS,intron-Distal3.597848.19964HepG2BCLAF1
chr157281040772810446+CDS,intron-Proximal3.050825.54400K562YBX3
chr157283719872837246+CDS,intron-Distal4.129115.89529K562PUM2
chr157286259872862651+CDS,intron-Distal,intron-Proximal3.758644.68902HepG2PPIG
chr157286258672862651+CDS,intron-Distal,intron-Proximal3.372623.02345K562ZNF622
chr157276733772767355+CDS3.237854.31744K562YBX3
chr157281040572810487+CDS,intron-Proximal3.438624.92880K562ZNF622
chr157285095372851015+intron-Distal4.338503.89085K562EXOSC5
chr157283660772836669+intron-Distal3.374794.56724K562KHSRP
chr157280618072806260+intron-Distal4.692715.86170K562ILF3
chr157285402172854080+intron-Distal4.0485714.50663HepG2AQR
chr157279076572790836+intron-Distal3.830577.05443K562KHSRP
chr157280615772806249+intron-Distal6.2631213.60442HepG2DDX59
chr157280410872804186+intron-Distal3.856886.29995HepG2HNRNPM
chr157278556272785651+intron-Distal4.418777.30204HepG2QKI
chr157278003972780134+intron-Distal4.302777.41529HepG2QKI
chr157279205972792114+intron-Distal4.370685.20806K562TIA1
chr157277905172779097+intron-Distal4.164234.04854HepG2HNRNPC
chr157285706472857136+intron-Distal4.123654.10336HepG2SUGP2
chr157285065572850704+intron-Distal4.431025.12361K562EXOSC5
chr157283621472836275+intron-Distal3.110344.81700HepG2U2AF2
chr157279175372791835+intron-Distal3.758289.53244K562KHSRP
chr157286767372867728+intron-Distal5.4174411.82991HepG2XPO5
chr157283644472836560+intron-Distal3.023436.60316K562KHSRP
chr157286638272866430+intron-Distal3.271574.56724K562KHSRP
chr157280525472805324+intron-Distal3.173693.35050HepG2SUGP2
chr157276769772767808+intron-Distal3.613425.03432K562GRWD1
chr157281291872812949+intron-Distal3.272078.44408K562KHSRP
chr157279076772790867+intron-Distal5.4789718.72681HepG2U2AF2
chr157280494472804972+intron-Distal4.375503.89080K562EXOSC5
chr157279083672790922+intron-Distal5.5519513.38264K562KHSRP
chr157277175672771776+intron-Distal4.342674.65900HepG2HNRNPC
chr157281928272819328+intron-Distal4.178166.78885HepG2QKI
chr157280413872804191+intron-Distal4.579685.84413K562HNRNPM
chr157279176372791836+intron-Distal3.659799.19790HepG2U2AF2
chr157280994472810016+intron-Distal3.024573.63132HepG2HNRNPC
chr157285694972857026+intron-Distal4.327755.11328HepG2SUGP2
chr157282108072821161+intron-Distal4.021793.82619K562ILF3
chr157280617472806275+intron-Distal6.6241818.94637HepG2PCBP2
chr157285905872859140+intron-Distal3.674113.16095HepG2U2AF2
chr157279193172792018+intron-Distal4.0967513.13856K562KHSRP
chr157286612672866260+intron-Distal4.2943220.31333K562KHSRP
chr157276771372767780+intron-Distal4.438225.59467HepG2PRPF4
chr157279579272795859+intron-Distal3.330573.39857HepG2HNRNPM
chr157281289172812918+intron-Distal3.593067.82071K562KHSRP
chr157276753172767600+intron-Distal3.138173.40641HepG2GTF2F1
chr157280615972806268+intron-Distal3.604624.92762HepG2CSTF2T
chr157281586272815947+intron-Distal3.838133.55732K562SAFB
chr157284928172849324+intron-Distal3.846053.01445K562EXOSC5
chr157279163972791714+intron-Distal3.121827.42856K562KHSRP
chr157279183572791931+intron-Distal5.4090323.30668K562KHSRP
chr157280447472804549+intron-Distal4.910487.51037HepG2HNRNPM
chr157286621872866302+intron-Distal3.774136.98930HepG2U2AF2
chr157286636372866443+intron-Distal4.4234010.33445HepG2U2AF2
chr157276735572767465+intron-Distal,intron-Proximal4.356935.44815HepG2PRPF4
chr157282006372820156+intron-Distal3.472103.89405HepG2PTBP1
chr157280409772804160+intron-Distal4.607845.12432K562EXOSC5
chr157287238272872474+intron-Distal4.6801915.55465HepG2PCBP2
chr157279174572791840+intron-Distal3.317594.65228HepG2KHSRP
chr157279184072791898+intron-Distal4.088793.22073HepG2KHSRP
chr157286626072866310+intron-Distal3.874363.49011K562KHSRP
chr157280449972804544+intron-Distal4.832454.78128K562HNRNPM
chr157280134672801410+intron-Distal4.485935.67326HepG2HNRNPC
chr157286762972867673+intron-Distal5.280316.79597HepG2XPO5
chr157276752672767592+intron-Distal3.100833.28147K562GRWD1
chr157280456572804616+intron-Distal3.646844.61282K562EXOSC5
chr157285827172858346+intron-Distal3.751803.45805K562KHSRP
chr157286632272866376+intron-Distal3.930838.11138K562KHSRP
chr157281389872813961+intron-Distal4.145108.38907HepG2HNRNPC
chr157279562872795700+intron-Distal3.219383.42785HepG2HNRNPM
chr157280616372806287+intron-Distal3.987876.96999HepG2ILF3
chr157276753272767599+intron-Distal4.393934.35952HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARIH1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARIH1 is not available on ENCORE database.

  • 67 RBPs can affect the levels of ARIH1.  








The Knockdown/knockout RNA-Seq assay for ARIH1 is not available on ENCORE database.





67 RBPs can affect the gene expression of ARIH1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARIH1ENSG00000166233.81580.776002116.50330-0.421002.955502.40800HepG2AKAP1
ARIH1ENSG00000166233.81402.452901751.22440-0.320402.151201.45510HepG2ASCC1
ARIH1ENSG00000166233.81350.133701663.78510-0.301401.991401.32850HepG2CIRBP
ARIH1ENSG00000166233.81000.758501682.79810-0.749805.399604.32820HepG2CNOT7
ARIH1ENSG00000166233.8901.492501415.94200-0.651407.267106.19560HepG2CPSF6
ARIH1ENSG00000166233.81405.858101697.50150-0.272004.092403.22000HepG2DAZAP1
ARIH1ENSG00000166233.8829.266401152.44560-0.474802.345901.71410HepG2DDX21
ARIH1ENSG00000166233.81410.078802027.44070-0.523904.885804.07310HepG2DDX3X
ARIH1ENSG00000166233.81127.580601333.78880-0.242302.263801.64110HepG2DKC1
ARIH1ENSG00000166233.8818.227801174.14940-0.521009.684708.55340HepG2DNAJC2
ARIH1ENSG00000166233.8922.387801195.00100-0.373602.561001.67150HepG2EEF2
ARIH1ENSG00000166233.81238.749301674.25460-0.434603.465202.80550HepG2EIF2S1
ARIH1ENSG00000166233.81227.08270970.057900.339002.162201.35390HepG2EIF3D
ARIH1ENSG00000166233.81282.711501850.23750-0.528504.326003.53070HepG2EIF4A3
ARIH1ENSG00000166233.81315.194701801.48610-0.453902.757302.06920HepG2EIF4B
ARIH1ENSG00000166233.81520.184502197.71580-0.5318011.001809.93260HepG2ETF1
ARIH1ENSG00000166233.81433.419701866.84420-0.381102.937402.22290HepG2FXR1
ARIH1ENSG00000166233.81264.083701731.75490-0.454103.552502.80270HepG2G3BP1
ARIH1ENSG00000166233.81212.581601605.12910-0.404602.849002.19960HepG2GPKOW
ARIH1ENSG00000166233.8861.877901330.35920-0.626307.372906.28410HepG2HNRNPC
ARIH1ENSG00000166233.81357.005201753.59800-0.369903.039202.30870HepG2HNRNPK
ARIH1ENSG00000166233.81260.681301546.37830-0.294702.745602.07440HepG2HNRNPL
ARIH1ENSG00000166233.8953.922401531.79990-0.683307.841206.84300HepG2HNRNPLL
ARIH1ENSG00000166233.8825.663201169.70380-0.502505.201503.94230HepG2HNRNPM
ARIH1ENSG00000166233.8948.416401321.56600-0.478707.813206.83290HepG2HNRNPU
ARIH1ENSG00000166233.81458.311101867.49600-0.356802.480901.85930HepG2MAGOH
ARIH1ENSG00000166233.81482.632901877.94300-0.341002.153601.59280HepG2MATR3
ARIH1ENSG00000166233.81359.397101683.22410-0.308303.462402.61040HepG2NOL12
ARIH1ENSG00000166233.81170.384101757.45200-0.5865012.4113011.27450HepG2PCBP1
ARIH1ENSG00000166233.8969.247201178.73690-0.282302.063501.41890HepG2PPIL4
ARIH1ENSG00000166233.81155.694401788.25920-0.6298013.1590012.14290HepG2PTBP1
ARIH1ENSG00000166233.81025.065001606.70760-0.648408.284207.32600HepG2PUF60
ARIH1ENSG00000166233.8751.304001419.99710-0.9184026.6260025.07700HepG2PUS1
ARIH1ENSG00000166233.82185.632301836.893900.250702.719802.20470HepG2RBM22
ARIH1ENSG00000166233.81605.855401990.17240-0.309604.071903.43840HepG2NELFE
ARIH1ENSG00000166233.81242.670001690.15140-0.443702.717601.92570HepG2RPS3A
ARIH1ENSG00000166233.8975.682701176.93180-0.270502.935002.27620HepG2SAFB2
ARIH1ENSG00000166233.81522.721001861.83370-0.290103.658402.99180HepG2SF3B4
ARIH1ENSG00000166233.8828.927901372.53320-0.7275015.3090013.98210HepG2SMN1
ARIH1ENSG00000166233.81243.893201687.03640-0.439602.272301.56770HepG2SNRNP70
ARIH1ENSG00000166233.82607.941902074.722200.329905.878405.22390HepG2SRFBP1
ARIH1ENSG00000166233.82346.194501943.341100.271703.730103.20180HepG2SRSF1
ARIH1ENSG00000166233.81449.279901746.72240-0.269302.760502.20060HepG2TAF15
ARIH1ENSG00000166233.8869.441401295.61990-0.5755010.538109.54300HepG2TRIM56
ARIH1ENSG00000166233.82047.641601450.207300.497605.114204.27480HepG2U2AF1
ARIH1ENSG00000166233.8790.100701075.13640-0.444403.496702.68740HepG2XRN2
ARIH1ENSG00000166233.81614.935501268.819400.347905.377704.49110HepG2ZC3H8
ARIH1ENSG00000166233.81366.701901641.94890-0.264703.702403.09470HepG2ZNF622
ARIH1ENSG00000166233.84197.069803282.705600.354407.164006.31430K562AGGF1
ARIH1ENSG00000166233.82733.360703472.08970-0.345103.853702.35700K562APOBEC3C
ARIH1ENSG00000166233.84251.560703583.957400.246302.909001.97390K562ATP5C1
ARIH1ENSG00000166233.81570.975302184.57330-0.475706.333205.14710K562CPSF6
ARIH1ENSG00000166233.84616.238603675.726100.328605.244803.98580K562DKC1
ARIH1ENSG00000166233.81527.964901991.90940-0.382505.532004.56680K562EIF2S2
ARIH1ENSG00000166233.81956.974602368.05280-0.275102.174101.44280K562EIF4A3
ARIH1ENSG00000166233.81541.740902325.39790-0.592907.794606.29910K562FIP1L1
ARIH1ENSG00000166233.81838.954502462.67840-0.421306.975106.07520K562FXR1
ARIH1ENSG00000166233.83558.369602461.567500.531503.835302.97250K562G3BP2
ARIH1ENSG00000166233.82197.498002654.29120-0.272502.514501.79080K562GRSF1
ARIH1ENSG00000166233.81104.465001821.14960-0.7215011.7617010.60570K562HNRNPC
ARIH1ENSG00000166233.81412.640901912.71330-0.437203.447202.39810K562HNRNPM
ARIH1ENSG00000166233.82363.962702841.41530-0.265402.301001.53050K562MAGOH
ARIH1ENSG00000166233.82251.864502835.70320-0.332603.540002.48260K562MATR3
ARIH1ENSG00000166233.83806.906802846.443500.419402.901801.99510K562NAA15
ARIH1ENSG00000166233.82014.371302528.21870-0.327803.071102.04090K562PCBP2
ARIH1ENSG00000166233.81546.569201824.32410-0.238301.986801.30610K562POLR2G
ARIH1ENSG00000166233.81244.325101609.81390-0.371502.923902.15400K562PRPF8
ARIH1ENSG00000166233.81337.191501632.88060-0.288202.229901.42580K562PSIP1
ARIH1ENSG00000166233.81317.325902760.58730-1.0674029.1149027.05460K562PTBP1
ARIH1ENSG00000166233.83725.557304474.34940-0.264203.759202.63800K562PUM2
ARIH1ENSG00000166233.82819.824003387.63120-0.264702.008201.53120K562PUS1
ARIH1ENSG00000166233.83993.411203300.648800.274803.422502.77480K562RBM15
ARIH1ENSG00000166233.81916.660502647.26110-0.465905.273604.06910K562RBM22
ARIH1ENSG00000166233.81981.446402580.43100-0.381103.278801.72900K562RBM34
ARIH1ENSG00000166233.81917.582902785.77500-0.538806.194804.47700K562NELFE
ARIH1ENSG00000166233.82050.367701639.770200.322302.098001.39110K562RPS19
ARIH1ENSG00000166233.82011.555302559.22880-0.347404.157803.10430K562SF3B4
ARIH1ENSG00000166233.82137.844202591.83750-0.277802.515301.51890K562SRSF4
ARIH1ENSG00000166233.81758.095702738.99210-0.639608.489807.16290K562TARDBP
ARIH1ENSG00000166233.83194.563102385.644500.421103.385302.14900K562U2AF1
ARIH1ENSG00000166233.82888.442802463.987000.229202.072301.37810K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARIH1 is not available on ENCORE database.





6 RBPs can affect the splicing of ARIH1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARIH1ENSG00000166233.8chr15+728104077281047572766830727673557283716072837264-0.070000.000480.01145excludedK562SF3B4
SEARIH1ENSG00000166233.8chr15+728104077281047572766830727673557283716072837264-0.067000.000010.00018excludedK562AQR
SEARIH1ENSG00000166233.8chr15+7278913172789199727672767276735572810407728104750.070000.000230.03201includedHepG2LARP4
SEARIH1ENSG00000166233.8chr15+728104077281047572766830727673557283716072837305-0.133000.000010.00087excludedHepG2SF3A3
SEARIH1ENSG00000166233.8chr15+728104077281047572766830727673557283716072837264-0.073000.003440.05185excludedK562HNRNPC
A3SSARIH1ENSG00000166233.8chr15+7286250472862648728625177286264872859408728595180.062000.000040.00034longerK562AQR
MXEARIH1ENSG00000166233.8chr15+7281040772810475728371607283730572766666727673557284761172847704-0.176000.003580.056632includedHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARIH1 is not avaliable on ENCORE database.