ANKS6

General Information

Gene Name       : ANKS6
Gene ID             : ENSG00000165138.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ANKS6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ANKS6ENSG00000165138.174.184.794.48ENCSR000AEF
HepG2ANKS6ENSG00000165138.1711.104.457.78ENCSR985KAT
K562ANKS6ENSG00000165138.1730.1724.8327.50ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ANKS6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ANKS6 RNA is bound by 14 proteins.  







eCLIP assay for ANKS6 is not avaliable on ENCORE database.





14 proteins are bound to ANKS6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9101547125101547211-5'-UTR,CDS,intron-Distal,intron-Proximal3.391134.94119K562SF3B4
chr9101558572101558803-5'-UTR,CDS,intron-Distal,intron-Proximal3.566643.01533HepG2SRSF1
chr9101558716101558814-5'-UTR,CDS,intron-Distal,intron-Proximal5.3730614.88157K562GEMIN5
chr9101558754101558811-5'-UTR,CDS,intron-Distal,intron-Proximal5.7702817.43395K562DROSHA
chr9101552621101552695-5'-UTR,CDS,intron-Distal4.062335.38772K562RBM15
chr9101558721101558814-5'-UTR,CDS,intron-Distal,intron-Proximal4.366497.99102K562NCBP2
chr9101558750101558812-5'-UTR,CDS,intron-Distal,intron-Proximal4.817067.08501HepG2DGCR8
chr9101558751101558810-5'-UTR,CDS,intron-Distal,intron-Proximal5.7835132.65002K562DGCR8
chr9101558733101558749-CDS,intron-Distal6.2217130.08159K562DGCR8
chr9101558379101558423-CDS,intron-Distal5.0508711.81473K562DGCR8
chr9101558692101558700-CDS,intron-Distal8.1548965.18858K562DGCR8
chr9101558585101558695-CDS,intron-Distal3.786943.41858K562FUS
chr9101558497101558588-CDS,intron-Distal6.4004548.39656K562DGCR8
chr9101552374101552454-CDS,intron-Distal,intron-Proximal4.587265.29868K562UCHL5
chr9101558588101558640-CDS,intron-Distal5.5580524.66791K562DGCR8
chr9101558719101558733-CDS,intron-Distal8.2625565.58136K562DGCR8
chr9101558459101558493-CDS,intron-Distal6.3391514.19934K562DROSHA
chr9101546323101546331-CDS,intron-Distal5.226847.23707K562RBM15
chr9101558430101558487-CDS,intron-Distal6.9793822.53896K562DGCR8
chr9101558530101558593-CDS,intron-Distal4.597804.92660HepG2DGCR8
chr9101558493101558626-CDS,intron-Distal6.2717274.89534K562DROSHA
chr9101558672101558750-CDS,intron-Distal3.897989.92531HepG2DGCR8
chr9101533177101533215-CDS,intron-Distal,intron-Proximal3.945373.83925K562YBX3
chr9101558677101558692-CDS,intron-Distal8.1416266.36696K562DGCR8
chr9101540677101540741-CDS,intron-Distal,intron-Proximal4.027315.63763K562AQR
chr9101558700101558719-CDS,intron-Distal8.6838793.49854K562DGCR8
chr9101546292101546323-CDS,intron-Distal5.392308.28112K562RBM15
chr9101558330101558385-intron-Distal6.2316419.15695K562DROSHA
chr9101554183101554261-intron-Distal3.012683.78503K562FUS
chr9101554191101554233-intron-Distal3.257474.06735K562DGCR8
chr9101554358101554441-intron-Distal3.039215.22931K562CSTF2T
chr9101554349101554453-intron-Distal4.190535.82800K562GTF2F1
chr9101554185101554211-intron-Distal3.800155.14244K562DROSHA
chr9101558336101558379-intron-Distal5.9304610.96323K562DGCR8
chr9101553965101554029-intron-Distal3.226555.41648K562DROSHA
chr9101553844101553882-intron-Distal3.148113.77771K562DGCR8
chr9101554524101554550-intron-Distal4.416966.34856K562DROSHA
chr9101542331101542471-intron-Distal,intron-Proximal4.188276.48405K562AQR
chr9101554376101554413-intron-Distal3.337704.58697K562DGCR8
chr9101553955101554037-intron-Distal3.358848.31252K562DGCR8
chr9101554483101554590-intron-Distal4.202034.98058K562HNRNPU
chr9101557393101557421-intron-Distal3.007016.08679K562DROSHA
chr9101554255101554331-intron-Distal4.5032014.54305K562DROSHA
chr9101553663101553703-intron-Distal3.073295.72619K562DROSHA
chr9101554803101554850-intron-Distal4.782846.04484K562DGCR8
chr9101554357101554444-intron-Distal4.1194831.56868K562DROSHA
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ANKS6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ANKS6 is not available on ENCORE database.

  • 86 RBPs can affect the levels of ANKS6.  








The Knockdown/knockout RNA-Seq assay for ANKS6 is not available on ENCORE database.





86 RBPs can affect the gene expression of ANKS6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ANKS6ENSG00000165138.12448.80850575.74070-0.359302.798302.10880HepG2AUH
ANKS6ENSG00000165138.12193.24320332.91280-0.784704.785403.78210HepG2CIRBP
ANKS6ENSG00000165138.12238.80320326.22300-0.450002.409001.38000HepG2CPSF7
ANKS6ENSG00000165138.12254.92170165.176800.625902.904601.80490HepG2CSTF2
ANKS6ENSG00000165138.12158.93860262.99670-0.726603.569102.70490HepG2DDX55
ANKS6ENSG00000165138.12493.19810370.195200.413801.958001.41610HepG2EIF4A3
ANKS6ENSG00000165138.12621.70950400.104200.635803.808202.91740HepG2FIP1L1
ANKS6ENSG00000165138.12405.09590219.674900.882805.353803.80090HepG2GRSF1
ANKS6ENSG00000165138.12346.24590256.816100.431001.977801.38080HepG2HNRNPC
ANKS6ENSG00000165138.12269.66800358.67060-0.411502.568301.91750HepG2HNRNPL
ANKS6ENSG00000165138.12156.81760266.78960-0.766604.011003.26800HepG2HNRNPLL
ANKS6ENSG00000165138.12193.49620255.11750-0.398901.957801.43870HepG2HNRNPU
ANKS6ENSG00000165138.12216.29350323.72240-0.581803.415402.51850HepG2MSI2
ANKS6ENSG00000165138.12123.81620216.89690-0.808803.019302.08890HepG2PABPC1
ANKS6ENSG00000165138.12253.38290342.49950-0.434801.918501.30820HepG2PABPC4
ANKS6ENSG00000165138.12531.01420381.445300.477204.252103.52820HepG2PCBP1
ANKS6ENSG00000165138.12192.49020322.40460-0.744103.740502.53830HepG2PCBP2
ANKS6ENSG00000165138.12310.82450227.542800.449902.568001.85570HepG2PPIL4
ANKS6ENSG00000165138.12280.27630388.15850-0.469803.121902.54790HepG2PTBP1
ANKS6ENSG00000165138.12524.98370395.644800.408003.646102.98490HepG2PUM1
ANKS6ENSG00000165138.12264.02170341.57130-0.371502.165201.60380HepG2PUS1
ANKS6ENSG00000165138.12189.80750311.06870-0.712702.691701.99570HepG2RAVER1
ANKS6ENSG00000165138.12249.20370381.49990-0.614403.983003.18540HepG2RBM25
ANKS6ENSG00000165138.12360.97740226.345700.673304.489803.72710HepG2RPS19
ANKS6ENSG00000165138.12368.20480238.293000.627703.097102.25240HepG2RPS3A
ANKS6ENSG00000165138.12215.54150420.97620-0.965806.794105.70420HepG2SF3A3
ANKS6ENSG00000165138.12399.85050624.03110-0.642207.602306.88480HepG2SRFBP1
ANKS6ENSG00000165138.12254.30730421.79010-0.730006.082205.44790HepG2SRSF1
ANKS6ENSG00000165138.12253.49700343.16360-0.436902.598902.06010HepG2SRSF9
ANKS6ENSG00000165138.12324.78010541.79420-0.738308.992508.17070HepG2SSB
ANKS6ENSG00000165138.12130.75990261.78660-1.001505.666004.75110HepG2SUPV3L1
ANKS6ENSG00000165138.12341.95660250.112600.451102.978902.39870HepG2TRIM56
ANKS6ENSG00000165138.12153.03370342.20860-1.161008.900207.76670HepG2U2AF1
ANKS6ENSG00000165138.12289.88530373.33940-0.365002.183401.55080HepG2UPF1
ANKS6ENSG00000165138.12189.56030354.29570-0.902309.158608.05570HepG2ZC3H8
ANKS6ENSG00000165138.12162.44670410.60490-1.3378015.4686014.43720HepG2ZNF622
ANKS6ENSG00000165138.121322.316402381.95730-0.8491026.2684024.62960K562AGGF1
ANKS6ENSG00000165138.121731.830502617.21510-0.595708.667106.66690K562AKAP8
ANKS6ENSG00000165138.121331.979702478.48630-0.8959017.7519015.82370K562AKAP8L
ANKS6ENSG00000165138.121476.682202806.25550-0.9263017.9141016.58920K562AQR
ANKS6ENSG00000165138.121992.951302600.43770-0.383805.527204.18420K562ATP5C1
ANKS6ENSG00000165138.12883.437301285.22740-0.540805.058103.86600K562BOP1
ANKS6ENSG00000165138.121524.472101902.86630-0.319903.175101.55120K562CEBPZ
ANKS6ENSG00000165138.121848.732502187.06360-0.242502.545901.38530K562DDX21
ANKS6ENSG00000165138.122310.939602758.46780-0.255402.913202.24500K562DDX47
ANKS6ENSG00000165138.121049.829301651.45220-0.653605.640903.78240K562EEF2
ANKS6ENSG00000165138.12995.419501595.60490-0.680708.433506.76100K562EFTUD2
ANKS6ENSG00000165138.121069.887001708.37190-0.675206.532204.84850K562EIF3D
ANKS6ENSG00000165138.122645.668403332.74330-0.333104.994503.75070K562EIF4G2
ANKS6ENSG00000165138.12807.506201178.53880-0.545504.882103.63220K562FTO
ANKS6ENSG00000165138.12701.30830955.95380-0.446904.542902.77670K562FUS
ANKS6ENSG00000165138.121890.319501287.093100.554404.570503.81970K562FXR1
ANKS6ENSG00000165138.12958.855501285.06790-0.422504.073102.30330K562G3BP1
ANKS6ENSG00000165138.121697.594602148.71220-0.340004.288802.87530K562GLRX3
ANKS6ENSG00000165138.12808.441501304.72420-0.690508.875807.44560K562GPKOW
ANKS6ENSG00000165138.121763.422502124.97580-0.269102.354901.36840K562HNRNPA1
ANKS6ENSG00000165138.12957.082501746.70030-0.867904.847403.08800K562HNRNPA2B1
ANKS6ENSG00000165138.12777.819301342.24520-0.787107.754805.60510K562HNRNPK
ANKS6ENSG00000165138.121758.671402492.73850-0.503205.495103.94660K562HNRNPL
ANKS6ENSG00000165138.121303.750002353.29400-0.8520022.2792019.89730K562HNRNPU
ANKS6ENSG00000165138.121013.559301344.73060-0.407902.693601.68450K562IGF2BP2
ANKS6ENSG00000165138.12916.011701250.78700-0.449403.593601.87930K562ILF3
ANKS6ENSG00000165138.121521.743302630.46240-0.7896010.677808.75410K562KIF1C
ANKS6ENSG00000165138.121708.247401412.594500.274102.262201.49850K562MAGOH
ANKS6ENSG00000165138.121703.899302517.86280-0.563406.789304.82030K562MAK16
ANKS6ENSG00000165138.122754.169803552.39930-0.367203.514902.24240K562MSI2
ANKS6ENSG00000165138.121976.904002259.08070-0.192502.138701.42230K562MTPAP
ANKS6ENSG00000165138.121193.509002065.44960-0.791206.823905.20810K562NAA15
ANKS6ENSG00000165138.121941.504202510.09760-0.370609.062107.81690K562NSUN2
ANKS6ENSG00000165138.12944.111201528.12810-0.694703.266602.16510K562PABPN1
ANKS6ENSG00000165138.121819.742101381.120500.397804.471302.72020K562PCBP1
ANKS6ENSG00000165138.12764.163101256.73800-0.717709.062507.26000K562PCBP2
ANKS6ENSG00000165138.121627.264202312.88260-0.507204.801403.70810K562PCBP3
ANKS6ENSG00000165138.121325.542201774.03060-0.420405.098904.00870K562POLR2G
ANKS6ENSG00000165138.12780.840101552.70820-0.9917015.8851014.06570K562PRPF8
ANKS6ENSG00000165138.12994.543702458.32340-1.3056031.6386029.78220K562PUS1
ANKS6ENSG00000165138.121310.156502394.97990-0.8703018.4368016.87130K562RBM15
ANKS6ENSG00000165138.12452.61290785.83830-0.796007.999705.58580K562RBM25
ANKS6ENSG00000165138.12977.282101880.04580-0.943905.042202.80180K562RBM39
ANKS6ENSG00000165138.12947.638201221.63390-0.366403.315502.22920K562RCC2
ANKS6ENSG00000165138.12983.101201581.58080-0.686006.901405.59830K562RPS19
ANKS6ENSG00000165138.121221.96660823.707700.568902.214601.32780K562RPS3
ANKS6ENSG00000165138.12861.537701328.65210-0.625004.132302.19940K562SERBP1
ANKS6ENSG00000165138.121716.635602476.74230-0.5289010.808309.27000K562SF3A3
ANKS6ENSG00000165138.12913.644201240.85480-0.441603.068502.04330K562SF3B1
ANKS6ENSG00000165138.12607.10230861.40530-0.504804.868403.71920K562SF3B4
ANKS6ENSG00000165138.121020.696501318.65200-0.369502.833801.55600K562SLBP
ANKS6ENSG00000165138.12919.488601604.89640-0.803603.844902.30430K562SNRNP200
ANKS6ENSG00000165138.121433.157201158.074700.307402.281401.37040K562SRFBP1
ANKS6ENSG00000165138.12880.949401115.37320-0.340403.310801.88960K562SSB
ANKS6ENSG00000165138.121064.285201503.30830-0.498304.071502.82030K562SUPV3L1
ANKS6ENSG00000165138.121723.359001361.630100.339802.625001.93410K562TARDBP
ANKS6ENSG00000165138.122413.993002897.11560-0.263203.750502.26210K562TROVE2
ANKS6ENSG00000165138.12405.30720803.11390-0.9866010.580208.23230K562U2AF1
ANKS6ENSG00000165138.12364.81120829.22940-1.1846016.9451014.91490K562U2AF2
ANKS6ENSG00000165138.121206.923901591.09120-0.398703.171902.07860K562UCHL5
ANKS6ENSG00000165138.121389.807902492.13470-0.842502.988801.62680K562UTP18
ANKS6ENSG00000165138.121445.550502203.80410-0.608406.267304.48700K562UTP3
ANKS6ENSG00000165138.121656.513802277.37320-0.459205.827804.53370K562WDR3
ANKS6ENSG00000165138.122292.705703161.53910-0.463605.769204.44950K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ANKS6 is not available on ENCORE database.





10 RBPs can affect the splicing of ANKS6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEANKS6ENSG00000165138.12chr9-1015523851015528881015471131015471581015584141015587940.434000.000000.00000includedK562WDR43
SEANKS6ENSG00000165138.12chr9-101552385101552888101547113101547158101558414101558821-0.418000.000000.00010excludedK562PUS1
SEANKS6ENSG00000165138.12chr9-1015537641015538791015523851015528881015584141015587940.266000.000160.01860includedK562HNRNPUL1
SEANKS6ENSG00000165138.12chr9-1015537641015538791015527181015528881015584141015587940.191000.002590.06896includedK562UTP18
SEANKS6ENSG00000165138.12chr9-101552385101552888101547113101547158101558414101558794-0.283000.001380.03492excludedK562RBM15
SEANKS6ENSG00000165138.12chr9-1015466611015467821015458511015464391015471131015471580.384000.000000.00000includedK562PTBP1
SEANKS6ENSG00000165138.12chr9-101530362101530532101518701101518885101533177101533328-0.214000.000090.00251excludedK562HNRNPC
A3SSANKS6ENSG00000165138.12chr9-1015462341015464761015462341015464391015471131015471580.120000.000000.00000longerK562AQR
A3SSANKS6ENSG00000165138.12chr9-101518701101518888101518701101518885101533177101533328-0.224000.012090.06214shorterK562AQR
A3SSANKS6ENSG00000165138.12chr9-1015187011015188881015187011015188851015303621015305320.208000.000980.09722longerK562HNRNPC
A3SSANKS6ENSG00000165138.12chr9-1015187011015188881015187011015188851015303621015305320.302000.000030.04769longerK562DDX55
MXEANKS6ENSG00000165138.12chr9-101547113101547158101552385101552888101546234101546439101558414101558821-0.106000.003580.054322includedK562PUS1
MXEANKS6ENSG00000165138.12chr9-101542470101542619101544748101544855101540507101540706101546234101546439-0.175000.002750.087132includedK562HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ANKS6 is not avaliable on ENCORE database.