WBSCR16

General Information

Gene Name       : WBSCR16
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: WBSCR16)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WBSCR16 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WBSCR16 RNA is bound by 10 proteins.  







eCLIP assay for WBSCR16 is not avaliable on ENCORE database.





10 proteins are bound to WBSCR16 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77448946074489592-5'-UTR,CDS,intron-Distal3.439793.39884HepG2GRSF1
chr77448946774489580-5'-UTR,CDS,intron-Distal3.104285.10436K562FXR2
chr77448935774489588-5'-UTR,CDS,intron-Distal3.902518.12352HepG2RPS3
chr77448955374489653-5'-UTR,CDS,intron-Distal,intron-Proximal3.054805.85428K562DDX3X
chr77448644274486583-CDS,intron-Distal,intron-Proximal3.533764.41784HepG2GRWD1
chr77448946774489569-CDS,intron-Distal4.6417110.82882K562GEMIN5
chr77448247474482587-CDS,intron-Distal,intron-Proximal4.052063.01428K562UCHL5
chr77448945374489513-CDS,intron-Distal4.436754.82666HepG2DDX3X
chr77448652874486590-CDS,intron-Distal,intron-Proximal3.825643.18234K562BUD13
chr77448253574482606-CDS,intron-Distal,intron-Proximal4.899207.65820K562LIN28B
chr77448951374489573-CDS,intron-Distal4.171837.12467HepG2DDX3X
chr77448950274489559-CDS,intron-Distal4.384933.78162K562HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WBSCR16 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WBSCR16 is not available on ENCORE database.

  • 91 RBPs can affect the levels of WBSCR16.  








The Knockdown/knockout RNA-Seq assay for WBSCR16 is not available on ENCORE database.





91 RBPs can affect the gene expression of WBSCR16 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WBSCR16ENSG00000174374.9491.60990638.17530-0.376402.339201.34960HepG2AATF
WBSCR16ENSG00000174374.9800.331801029.84790-0.363804.009603.09850HepG2AKAP8L
WBSCR16ENSG00000174374.9781.098601331.43760-0.769408.886107.53290HepG2ASCC1
WBSCR16ENSG00000174374.91736.193301480.502800.229702.405701.75690HepG2AUH
WBSCR16ENSG00000174374.9571.92890754.40050-0.399502.940201.67240HepG2BUD13
WBSCR16ENSG00000174374.9451.163501016.09870-1.1713013.2745011.23120HepG2CCAR1
WBSCR16ENSG00000174374.9974.876701264.97810-0.375802.669001.90920HepG2CIRBP
WBSCR16ENSG00000174374.9611.989801024.79800-0.7438015.7329014.41880HepG2CKAP4
WBSCR16ENSG00000174374.9564.66970704.14900-0.318501.935601.35540HepG2DDX21
WBSCR16ENSG00000174374.9998.735701541.38200-0.626006.310305.40360HepG2DDX3X
WBSCR16ENSG00000174374.9829.345701272.85920-0.618005.811604.96980HepG2EIF2S1
WBSCR16ENSG00000174374.9815.203301369.72510-0.748706.075305.08520HepG2EIF4B
WBSCR16ENSG00000174374.9669.17460872.24210-0.382302.560501.50940HepG2ESF1
WBSCR16ENSG00000174374.91273.595401699.88820-0.416507.020106.13660HepG2ETF1
WBSCR16ENSG00000174374.9737.260201016.74550-0.463702.863302.08040HepG2FIP1L1
WBSCR16ENSG00000174374.9729.912601032.83430-0.500804.735103.72230HepG2FUBP3
WBSCR16ENSG00000174374.91140.545501419.57310-0.315702.005901.41300HepG2FXR1
WBSCR16ENSG00000174374.9820.945301316.61520-0.681506.761705.74170HepG2G3BP1
WBSCR16ENSG00000174374.91093.242401398.07860-0.354802.480401.63880HepG2G3BP2
WBSCR16ENSG00000174374.9264.88630629.72270-1.249306.709705.74040HepG2GPKOW
WBSCR16ENSG00000174374.91194.772701009.882400.242402.700802.03470HepG2HNRNPL
WBSCR16ENSG00000174374.9332.00400600.96390-0.856103.985503.24480HepG2HNRNPLL
WBSCR16ENSG00000174374.9549.87060735.30120-0.419204.271603.53150HepG2HNRNPU
WBSCR16ENSG00000174374.9997.879801338.22270-0.423403.158002.44260HepG2IGF2BP2
WBSCR16ENSG00000174374.9512.41940751.08290-0.551608.230007.03160HepG2ILF2
WBSCR16ENSG00000174374.9857.697601346.18770-0.650305.125603.72070HepG2KHSRP
WBSCR16ENSG00000174374.91128.189801420.07080-0.332002.124701.54710HepG2MAGOH
WBSCR16ENSG00000174374.91065.502801427.94240-0.422402.885902.24260HepG2MATR3
WBSCR16ENSG00000174374.9810.631901461.51630-0.8503010.281009.09990HepG2NCBP2
WBSCR16ENSG00000174374.9796.179901301.29030-0.708807.542506.36380HepG2PABPC4
WBSCR16ENSG00000174374.91034.012901306.45200-0.337403.932403.23580HepG2PCBP1
WBSCR16ENSG00000174374.9386.33490618.41990-0.678702.637301.84770HepG2PRPF8
WBSCR16ENSG00000174374.9966.448501329.42020-0.460006.706905.92900HepG2PTBP1
WBSCR16ENSG00000174374.9920.570801113.22870-0.274101.998001.42180HepG2PUM2
WBSCR16ENSG00000174374.9974.254801439.67450-0.563407.987707.01010HepG2QKI
WBSCR16ENSG00000174374.9930.262001306.64270-0.490205.247704.34640HepG2RBM25
WBSCR16ENSG00000174374.91270.524901479.47010-0.219701.901701.43410HepG2NELFE
WBSCR16ENSG00000174374.91018.512901378.01050-0.436106.053305.19070HepG2RECQL
WBSCR16ENSG00000174374.91216.18000964.941300.333702.386801.74480HepG2RPLP0
WBSCR16ENSG00000174374.9429.22340611.69890-0.511102.099101.40610HepG2RRP9
WBSCR16ENSG00000174374.9930.19440654.808100.506407.235806.26540HepG2SAFB2
WBSCR16ENSG00000174374.9786.18650594.785000.402402.155901.52810HepG2SF3B1
WBSCR16ENSG00000174374.9968.459101383.99670-0.515108.081107.15300HepG2SF3B4
WBSCR16ENSG00000174374.9915.09860763.599800.261002.472201.85960HepG2SMN1
WBSCR16ENSG00000174374.9427.78890661.82080-0.629502.230001.53220HepG2SNRNP70
WBSCR16ENSG00000174374.9966.023901444.63430-0.5806010.322409.53810HepG2SRSF1
WBSCR16ENSG00000174374.9959.814401175.32260-0.292203.124802.54550HepG2SRSF9
WBSCR16ENSG00000174374.91695.293101393.202400.283003.417802.86150HepG2SSB
WBSCR16ENSG00000174374.9435.59780679.11000-0.640604.138202.65010HepG2STAU1
WBSCR16ENSG00000174374.9693.618601298.60840-0.9048018.8607017.58610HepG2TAF15
WBSCR16ENSG00000174374.9350.38540585.98570-0.741902.853202.11900HepG2TARDBP
WBSCR16ENSG00000174374.9716.723801193.12250-0.7353010.951209.32300HepG2TIA1
WBSCR16ENSG00000174374.9869.16300720.873700.269802.381801.85070HepG2TRIM56
WBSCR16ENSG00000174374.9974.51440809.347100.267802.305101.74720HepG2UTP3
WBSCR16ENSG00000174374.9447.24890739.00930-0.7245011.3457010.14280HepG2ZC3H8
WBSCR16ENSG00000174374.91593.725201090.329200.5475010.121109.12490K562AGGF1
WBSCR16ENSG00000174374.91472.145301134.534200.375703.281302.56780K562AKAP8L
WBSCR16ENSG00000174374.92710.558902179.239800.314702.936601.65730K562APOBEC3C
WBSCR16ENSG00000174374.91178.580602186.06840-0.8913014.4412013.24700K562AQR
WBSCR16ENSG00000174374.91518.760801190.394400.351404.026202.90550K562ATP5C1
WBSCR16ENSG00000174374.9512.95410688.66400-0.425002.644901.79230K562BOP1
WBSCR16ENSG00000174374.9858.227701175.89290-0.454303.314101.72840K562BUD13
WBSCR16ENSG00000174374.9493.70250768.08650-0.637605.866704.18240K562CCAR1
WBSCR16ENSG00000174374.91070.067901612.93040-0.592003.267202.09650K562CNOT7
WBSCR16ENSG00000174374.92593.821603037.11820-0.227602.173301.31050K562CELF1
WBSCR16ENSG00000174374.9615.06550959.45260-0.641504.037801.43110K562DDX55
WBSCR16ENSG00000174374.91504.438701220.857100.301203.269602.30780K562DKC1
WBSCR16ENSG00000174374.9709.054601004.49170-0.502504.325803.16630K562EFTUD2
WBSCR16ENSG00000174374.9921.36680689.774500.417603.682402.77360K562EIF3G
WBSCR16ENSG00000174374.9806.681601290.41060-0.677805.483203.13250K562ESF1
WBSCR16ENSG00000174374.9514.13290986.14570-0.9397011.279408.83070K562FKBP4
WBSCR16ENSG00000174374.9512.46940745.02500-0.539804.343703.27220K562FMR1
WBSCR16ENSG00000174374.9428.86040631.45810-0.558203.898902.79800K562FTO
WBSCR16ENSG00000174374.91504.253401151.945400.384904.919804.14550K562FXR1
WBSCR16ENSG00000174374.9279.76020615.74580-1.1381010.784709.20680K562G3BP2
WBSCR16ENSG00000174374.91034.289901425.24300-0.462606.187004.52030K562GLRX3
WBSCR16ENSG00000174374.9459.99160699.15330-0.604005.292404.20150K562GPKOW
WBSCR16ENSG00000174374.9741.800501135.96270-0.614807.228806.30800K562HNRNPC
WBSCR16ENSG00000174374.91294.15210998.208200.374502.475901.59790K562HNRNPM
WBSCR16ENSG00000174374.91349.135201808.17300-0.422502.951802.02940K562HNRNPU
WBSCR16ENSG00000174374.91558.628701204.033900.372303.168602.28090K562KIF1C
WBSCR16ENSG00000174374.9378.81830596.94530-0.656103.092402.09880K562KRR1
WBSCR16ENSG00000174374.9860.784701099.96900-0.353702.753201.36840K562LARP7
WBSCR16ENSG00000174374.91627.099301348.820700.270502.352101.52380K562MBNL1
WBSCR16ENSG00000174374.91189.930301498.45300-0.332604.327803.33530K562MTPAP
WBSCR16ENSG00000174374.9837.276801106.09480-0.401703.846102.37750K562NCBP2
WBSCR16ENSG00000174374.91211.998501664.93900-0.4581010.037208.73640K562NSUN2
WBSCR16ENSG00000174374.91108.264101549.54920-0.483502.515201.35160K562PABPC1
WBSCR16ENSG00000174374.92088.826302537.79630-0.280903.164601.62930K562PNPT1
WBSCR16ENSG00000174374.91677.458601377.685800.283902.025401.32710K562PPIG
WBSCR16ENSG00000174374.91279.984301008.862500.343302.472101.83860K562PTBP1
WBSCR16ENSG00000174374.92437.607002866.52240-0.233802.313301.34540K562PUM1
WBSCR16ENSG00000174374.91520.754801125.166100.434503.793803.17190K562PUS1
WBSCR16ENSG00000174374.91497.634601096.288700.450005.844005.00920K562RBM15
WBSCR16ENSG00000174374.91313.853701642.83560-0.322403.824002.87400K562SF3A3
WBSCR16ENSG00000174374.9449.73310664.85790-0.564003.702202.56870K562SF3B1
WBSCR16ENSG00000174374.9983.265201456.20680-0.566605.317703.49520K562STAU1
WBSCR16ENSG00000174374.9686.16450946.22280-0.463603.258302.15140K562SUPV3L1
WBSCR16ENSG00000174374.91369.902701092.169000.326802.971002.11690K562SYNCRIP
WBSCR16ENSG00000174374.9391.72290616.22650-0.653606.796105.54370K562U2AF2
WBSCR16ENSG00000174374.91484.437001765.36820-0.250103.001602.25310K562UPF1
WBSCR16ENSG00000174374.91113.366701510.57280-0.440204.829003.65530K562WDR3
WBSCR16ENSG00000174374.91148.386201570.80000-0.451908.261806.87330K562WDR43
WBSCR16ENSG00000174374.91939.003902462.77040-0.345003.309202.35480K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WBSCR16 is not available on ENCORE database.





5 RBPs can affect the splicing of WBSCR16 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEWBSCR16ENSG00000174374.9chr7-744824767448260574474399744745817448645374486583-0.142000.002760.04695excludedK562SF3B4
SEWBSCR16ENSG00000174374.9chr7-744770197447710474474399744745817448645374486583-0.491000.000700.01277excludedK562PUS1
A3SSWBSCR16ENSG00000174374.9chr7-7448247674482684744824767448260574486453744865830.167000.000000.00000longerK562AQR
A3SSWBSCR16ENSG00000174374.9chr7-7448645374486611744864537448658374489249744896990.152000.000000.00000longerK562AQR
A3SSWBSCR16ENSG00000174374.9chr7-7448247674482684744824767448260574486453744865830.098000.000000.00031longerK562U2AF1
MXEWBSCR16ENSG00000174374.9chr7-7446681774466903744700077447018174457081744572177447163574471723-0.256000.004110.056372includedK562SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for WBSCR16 is not avaliable on ENCORE database.