UBQLN4

General Information

Gene Name       : UBQLN4
Gene ID             : ENSG00000160803.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: UBQLN4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878UBQLN4ENSG00000160803.715.7418.5917.16ENCSR000AEF
HepG2UBQLN4ENSG00000160803.733.1228.7730.95ENCSR985KAT
K562UBQLN4ENSG00000160803.743.8140.4442.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for UBQLN4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • UBQLN4 RNA is bound by 22 proteins.  







eCLIP assay for UBQLN4 is not avaliable on ENCORE database.





22 proteins are bound to UBQLN4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1156006032156006074-3'-UTR,intron-Distal5.121705.65617K562DDX55
chr1156006736156006800-3'-UTR,CDS,intron-Distal3.945025.16954K562PCBP1
chr1156006167156006221-3'-UTR,intron-Distal4.016007.44326K562DDX55
chr1156006605156006647-3'-UTR,intron-Distal3.298315.16029K562DDX55
chr1156006026156006162-3'-UTR,intron-Distal3.421704.33455K562LIN28B
chr1156006623156006711-3'-UTR,intron-Distal3.305596.53985K562PCBP1
chr1156006132156006206-3'-UTR,intron-Distal3.967424.49052K562DDX6
chr1156021647156021702-CDS,intron-Distal,intron-Proximal4.166684.23351K562BUD13
chr1156021640156021700-CDS,intron-Distal,intron-Proximal4.381634.57682HepG2SF3B4
chr1156012024156012045-CDS,intron-Distal,intron-Proximal4.135683.12843K562PRPF8
chr1156012008156012051-CDS,intron-Distal,intron-Proximal4.183426.32052K562AQR
chr1156011424156011514-CDS,intron-Distal,intron-Proximal3.3841515.78281K562AQR
chr1156012683156012724-CDS,intron-Distal,intron-Proximal3.233433.26275K562BUD13
chr1156011315156011415-CDS,intron-Distal3.416094.78882K562IGF2BP2
chr1156012685156012757-CDS,intron-Distal,intron-Proximal3.924717.81467HepG2U2AF2
chr1156023058156023165-intron-Distal4.158364.95463K562GTF2F1
chr1156022989156023094-intron-Distal5.0757415.82229HepG2CSTF2T
chr1156023035156023183-intron-Distal4.522204.42197K562EWSR1
chr1156020022156020082-intron-Distal,intron-Proximal3.930806.32052K562AQR
chr1156022600156022670-intron-Distal3.269543.20331K562CSTF2T
chr1156022761156022833-intron-Distal4.920338.38423HepG2CSTF2
chr1156023007156023205-intron-Distal3.9029412.93223K562CSTF2T
chr1156023265156023352-intron-Distal4.074533.71567HepG2RBFOX2
chr1156023271156023361-intron-Distal4.228387.76905K562GTF2F1
chr1156022769156022833-intron-Distal3.945626.36668HepG2CSTF2T
chr1156023116156023188-intron-Distal3.194373.63246HepG2CSTF2T
chr1156022735156022837-intron-Distal3.8042112.72909K562CSTF2T
chr1156020614156020660-intron-Distal3.831783.01428K562UCHL5
chr1156022992156023105-intron-Distal4.980684.92816HepG2XRN2
chr1156011581156011600-intron-Distal,intron-Proximal3.942344.15711K562AQR
chr1156011613156011662-intron-Distal,intron-Proximal3.8594410.78170K562AQR
chr1156023013156023125-intron-Distal4.659466.58205HepG2PRPF4
chr1156022987156023255-intron-Distal3.7144112.01511HepG2FAM120A
chr1156023053156023106-intron-Distal4.932633.53505HepG2EFTUD2
chr1156013417156013485-intron-Distal3.533164.77019K562BUD13
chr1156022720156022769-intron-Distal3.575233.48399HepG2CSTF2T
chr1156022769156022837-intron-Distal7.1076426.50364K562FMR1
chr1156023260156023345-intron-Distal4.142873.29554HepG2GTF2F1
chr1156012469156012516-intron-Distal,intron-Proximal4.030826.35873K562PRPF8
chr1156012460156012511-intron-Distal,intron-Proximal5.585049.63974K562AQR
chr1156023296156023362-intron-Distal3.455354.07062HepG2CSTF2T
chr1156012511156012565-intron-Distal,intron-Proximal4.8605916.50383K562AQR
chr1156023298156023359-intron-Distal4.365874.94603K562CSTF2T
chr1156023125156023238-intron-Distal4.515865.59467HepG2PRPF4
chr1156023001156023071-intron-Distal3.652424.83542K562DROSHA
chr1156023033156023091-intron-Distal3.962483.44423K562BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for UBQLN4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for UBQLN4 is not available on ENCORE database.

  • 86 RBPs can affect the levels of UBQLN4.  








The Knockdown/knockout RNA-Seq assay for UBQLN4 is not available on ENCORE database.





86 RBPs can affect the gene expression of UBQLN4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
UBQLN4ENSG00000160803.7946.100601629.85200-0.784708.114307.25480HepG2AKAP1
UBQLN4ENSG00000160803.71728.088001407.222600.296203.663402.79290HepG2AKAP8L
UBQLN4ENSG00000160803.71613.293201281.241200.332402.358201.63980HepG2CIRBP
UBQLN4ENSG00000160803.71014.632801239.52910-0.288802.657101.66210HepG2YBX3
UBQLN4ENSG00000160803.7507.15000825.41260-0.702707.351705.72040HepG2CSTF2
UBQLN4ENSG00000160803.71387.823901804.32650-0.378603.291602.49470HepG2DAZAP1
UBQLN4ENSG00000160803.7772.435901314.07940-0.766608.111906.86720HepG2DDX55
UBQLN4ENSG00000160803.71234.487301804.71240-0.547905.906304.48400HepG2DDX5
UBQLN4ENSG00000160803.7689.481501341.11110-0.9598011.3148010.16510HepG2DDX6
UBQLN4ENSG00000160803.7739.457401173.92370-0.666808.209206.61470HepG2DHX30
UBQLN4ENSG00000160803.71120.640101340.08970-0.258002.545001.89220HepG2DKC1
UBQLN4ENSG00000160803.7950.131701217.13720-0.357303.828703.01180HepG2DNAJC21
UBQLN4ENSG00000160803.71212.26090955.081700.343902.108701.31120HepG2EIF3D
UBQLN4ENSG00000160803.71788.699701387.263300.366601.952101.36750HepG2EIF4B
UBQLN4ENSG00000160803.71111.779601705.47550-0.617306.578205.34810HepG2EIF4G2
UBQLN4ENSG00000160803.71718.360301368.669400.328202.997202.13080HepG2EWSR1
UBQLN4ENSG00000160803.7658.59030853.73560-0.374403.233601.95670HepG2FAM120A
UBQLN4ENSG00000160803.72881.803502209.380300.383202.645901.89220HepG2FIP1L1
UBQLN4ENSG00000160803.7777.100201093.72170-0.493103.947802.45060HepG2FKBP4
UBQLN4ENSG00000160803.72005.066201437.540200.479904.330803.47950HepG2FXR1
UBQLN4ENSG00000160803.7889.282901333.59700-0.584605.114204.22150HepG2G3BP1
UBQLN4ENSG00000160803.71140.67850850.357400.423703.257102.27470HepG2GEMIN5
UBQLN4ENSG00000160803.71778.038502541.78330-0.515604.659403.84200HepG2GPKOW
UBQLN4ENSG00000160803.71710.895901228.797500.477405.164904.32010HepG2HNRNPA1
UBQLN4ENSG00000160803.7898.642701658.42480-0.8840011.534109.86510HepG2HNRNPA2B1
UBQLN4ENSG00000160803.71117.089001366.80400-0.291102.051201.44390HepG2HNRNPC
UBQLN4ENSG00000160803.71669.663202005.23910-0.264203.262702.48890HepG2HNRNPF
UBQLN4ENSG00000160803.71784.184901350.229700.402003.538802.75480HepG2HNRNPK
UBQLN4ENSG00000160803.71205.867401643.47950-0.446703.343502.60870HepG2HNRNPL
UBQLN4ENSG00000160803.71783.696502425.65550-0.443503.777903.05250HepG2HNRNPLL
UBQLN4ENSG00000160803.7994.772401357.76800-0.448806.956606.03190HepG2HNRNPU
UBQLN4ENSG00000160803.71518.845401974.58500-0.378604.453003.55300HepG2IGF2BP1
UBQLN4ENSG00000160803.71118.821901386.91610-0.309904.335603.43850HepG2ILF2
UBQLN4ENSG00000160803.7716.090901050.85390-0.553303.338301.87180HepG2ILF3
UBQLN4ENSG00000160803.71323.224301791.67280-0.437202.629401.41930HepG2KRR1
UBQLN4ENSG00000160803.7998.901201446.11090-0.533804.211603.44980HepG2MATR3
UBQLN4ENSG00000160803.71496.210201787.79700-0.256902.165901.44580HepG2MSI2
UBQLN4ENSG00000160803.71766.373702473.48820-0.485802.819201.84290HepG2MTPAP
UBQLN4ENSG00000160803.7660.17130948.71140-0.523104.670902.81880HepG2NIP7
UBQLN4ENSG00000160803.71328.186301789.18830-0.429803.531102.66970HepG2NOL12
UBQLN4ENSG00000160803.71494.191302150.68620-0.525404.790503.81610HepG2NSUN2
UBQLN4ENSG00000160803.7966.893501318.28570-0.447203.369002.57800HepG2PABPC4
UBQLN4ENSG00000160803.71750.189501351.274100.373105.525904.71520HepG2PCBP1
UBQLN4ENSG00000160803.7781.080201211.02160-0.6327010.292308.91670HepG2PPIL4
UBQLN4ENSG00000160803.71875.817801606.526300.223502.255601.54990HepG2PRPF4
UBQLN4ENSG00000160803.71645.735501374.977600.259202.978302.41440HepG2PTBP1
UBQLN4ENSG00000160803.71990.800801426.716400.4806010.170409.11600HepG2PUS1
UBQLN4ENSG00000160803.71528.798102160.17930-0.498805.935204.99060HepG2RPLP0
UBQLN4ENSG00000160803.7793.834001148.22000-0.532503.017502.03210HepG2RPS10
UBQLN4ENSG00000160803.71216.62770929.404300.388403.440902.76430HepG2RPS19
UBQLN4ENSG00000160803.7743.121401209.15600-0.7023015.0930013.77090HepG2SAFB2
UBQLN4ENSG00000160803.72513.436101948.219200.367402.038901.45890HepG2SF3A3
UBQLN4ENSG00000160803.71852.337302401.01610-0.374302.805502.09390HepG2SF3B1
UBQLN4ENSG00000160803.71227.466701638.02580-0.416303.297002.54180HepG2SLBP
UBQLN4ENSG00000160803.71595.463501410.086100.178101.949801.39420HepG2SMN1
UBQLN4ENSG00000160803.71219.392702671.51690-1.1315011.090309.54080HepG2SNRNP70
UBQLN4ENSG00000160803.71076.855701494.20000-0.472507.612106.91910HepG2SRSF1
UBQLN4ENSG00000160803.71899.307702583.22750-0.443703.184802.10180HepG2SRSF3
UBQLN4ENSG00000160803.71584.465701970.09170-0.314304.394903.54930HepG2SRSF7
UBQLN4ENSG00000160803.7890.511501215.61490-0.449006.695705.90460HepG2SRSF9
UBQLN4ENSG00000160803.71071.257601887.81810-0.8174024.3050023.12060HepG2SSB
UBQLN4ENSG00000160803.7590.711101308.07790-1.1469016.6214015.20840HepG2SUPV3L1
UBQLN4ENSG00000160803.71876.313802363.82020-0.333202.154801.50280HepG2TARDBP
UBQLN4ENSG00000160803.71047.914801319.34770-0.332303.046602.52600HepG2TIAL1
UBQLN4ENSG00000160803.71100.179101331.11770-0.274902.975502.39570HepG2TRIM56
UBQLN4ENSG00000160803.72401.709501889.792800.345702.673902.05530HepG2U2AF1
UBQLN4ENSG00000160803.71471.686701727.77450-0.231402.623101.93970HepG2UPF1
UBQLN4ENSG00000160803.72534.787801668.095400.6036016.1669014.89630HepG2UTP3
UBQLN4ENSG00000160803.71019.513301585.47110-0.6370015.7037014.31810HepG2ZC3H8
UBQLN4ENSG00000160803.71620.261201900.21850-0.229903.169802.59700HepG2ZNF622
UBQLN4ENSG00000160803.73976.792102446.833700.7006024.9565023.36380K562AGGF1
UBQLN4ENSG00000160803.73217.091402688.826000.258702.272001.39360K562AKAP8
UBQLN4ENSG00000160803.73619.095902546.072300.507304.596503.74720K562AKAP8L
UBQLN4ENSG00000160803.72098.945701614.912700.378103.313902.13920K562CCAR1
UBQLN4ENSG00000160803.74426.865203596.109700.299705.031404.18870K562DDX47
UBQLN4ENSG00000160803.72292.332002739.56250-0.257102.726801.86010K562DKC1
UBQLN4ENSG00000160803.72144.402902508.50080-0.226202.445801.76240K562EIF2S2
UBQLN4ENSG00000160803.72338.851201642.625600.509702.895001.86300K562EIF3A
UBQLN4ENSG00000160803.71562.647001157.164500.433305.782004.64610K562EIF3G
UBQLN4ENSG00000160803.72171.417601675.708000.373805.644104.82360K562FXR1
UBQLN4ENSG00000160803.71730.164102158.59100-0.319202.976402.36070K562HNRNPC
UBQLN4ENSG00000160803.73294.371202701.910800.285902.850102.01100K562KIF1C
UBQLN4ENSG00000160803.71234.123101655.09780-0.423404.626403.40400K562MATR3
UBQLN4ENSG00000160803.73570.677803026.837700.238302.276401.46460K562MBNL1
UBQLN4ENSG00000160803.72703.098202121.603500.349402.159601.40210K562NAA15
UBQLN4ENSG00000160803.72610.749603319.75870-0.346602.696901.87680K562PCBP3
UBQLN4ENSG00000160803.71946.205602546.24550-0.387703.523202.61230K562POLR2G
UBQLN4ENSG00000160803.72222.067801611.388100.463506.091705.13850K562PTBP1
UBQLN4ENSG00000160803.73625.736304409.58370-0.282402.762501.69630K562PUM1
UBQLN4ENSG00000160803.74619.416302524.784400.871507.704706.84540K562PUS1
UBQLN4ENSG00000160803.73518.902202460.204900.516207.012806.09740K562RBM15
UBQLN4ENSG00000160803.72912.546802269.151100.360003.844902.55990K562SAFB
UBQLN4ENSG00000160803.71266.623601618.43390-0.353602.363101.42770K562SUPV3L1
UBQLN4ENSG00000160803.73036.111302554.120000.249302.029201.32580K562SYNCRIP
UBQLN4ENSG00000160803.72714.171401977.553600.456705.392203.96810K562TRIM56
UBQLN4ENSG00000160803.72444.411103310.25570-0.4375010.342309.06560K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for UBQLN4 is not available on ENCORE database.





7 RBPs can affect the splicing of UBQLN4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUBQLN4ENSG00000160803.7chr1-156011943156012027156011662156011778156012564156012704-0.177000.000000.00000excludedHepG2U2AF1
SEUBQLN4ENSG00000160803.7chr1-156011943156012027156011662156011778156012564156012704-0.280000.000000.00000excludedHepG2U2AF2
SEUBQLN4ENSG00000160803.7chr1-156011943156012027156011662156011778156012564156012704-0.051000.000320.00463excludedK562AQR
SEUBQLN4ENSG00000160803.7chr1-156011943156012027156011662156011778156012564156012704-0.083000.000330.00754excludedK562HNRNPC
A3SSUBQLN4ENSG00000160803.7chr1-1560119431560121681560119431560120271560125641560127040.078000.000390.03768longerHepG2HNRNPK
A3SSUBQLN4ENSG00000160803.7chr1-1560119431560121681560119431560120271560125641560127040.148000.000010.00171longerK562EFTUD2
A3SSUBQLN4ENSG00000160803.7chr1-1560182921560185181560182921560184501560200811560201500.055000.000010.00007longerK562AQR
A3SSUBQLN4ENSG00000160803.7chr1-1560214961560216841560214961560216481560233841560234410.115000.000000.00000longerK562AQR
A3SSUBQLN4ENSG00000160803.7chr1-1560209001560211411560209001560211181560214961560216480.064000.000000.00000longerK562AQR
A3SSUBQLN4ENSG00000160803.7chr1-1560119431560121681560119431560120271560125641560127040.189000.000000.00001longerK562AQR
A3SSUBQLN4ENSG00000160803.7chr1-1560215841560218161560215841560216481560233841560235850.154000.000180.01115longerK562U2AF1
A3SSUBQLN4ENSG00000160803.7chr1-1560119431560121681560119431560120271560125641560127040.171000.000020.01116longerHepG2UCHL5

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for UBQLN4 is not avaliable on ENCORE database.