TAF2

General Information

Gene Name       : TAF2
Gene ID             : ENSG00000064313.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TAF2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TAF2ENSG00000064313.1128.3221.0924.70ENCSR000AEF
HepG2TAF2ENSG00000064313.1113.3016.2414.77ENCSR985KAT
K562TAF2ENSG00000064313.1128.6436.4232.53ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TAF2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TAF2 RNA is bound by 12 proteins.  







eCLIP assay for TAF2 is not avaliable on ENCORE database.





12 proteins are bound to TAF2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr8120844743120844920-5'-UTR,CDS,intron-Distal3.133367.04888K562UCHL5
chr8120844743120844903-5'-UTR,CDS,intron-Distal3.122503.23249K562SRSF1
chr8120844744120844897-5'-UTR,CDS,intron-Distal3.890297.58497HepG2GRWD1
chr8120844939120845059-5'-UTR,intron-Distal3.715045.28199HepG2GRWD1
chr8120756526120756574-CDS,intron-Distal,intron-Proximal4.159624.48692K562YBX3
chr8120801920120801976-CDS,intron-Distal4.754075.70640HepG2BCLAF1
chr8120795754120795874-CDS,intron-Distal,intron-Proximal3.848818.66838HepG2BCLAF1
chr8120803568120803620-CDS,intron-Distal3.687844.51739HepG2BCLAF1
chr8120814046120814101-CDS,intron-Distal4.602544.34038HepG2BCLAF1
chr8120807766120807795-CDS,intron-Distal,intron-Proximal4.673844.37348HepG2BCLAF1
chr8120805497120805604-intron-Distal,intron-Proximal3.906573.89294K562KHSRP
chr8120844606120844716-intron-Distal3.7703912.37936K562AQR
chr8120757969120758030-intron-Distal4.217763.45317HepG2HNRNPL
chr8120767035120767101-intron-Distal4.021324.14103K562KHSRP
chr8120807081120807141-intron-Distal3.944054.77518HepG2U2AF2
chr8120802051120802204-intron-Distal,intron-Proximal3.189043.93901K562KHSRP
chr8120844668120844702-intron-Distal3.184843.80983K562TIA1
chr8120782443120782574-intron-Distal3.346053.72952K562EXOSC5
chr8120782488120782569-intron-Distal4.835843.53404K562HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TAF2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TAF2 is not available on ENCORE database.

  • 81 RBPs can affect the levels of TAF2.  








The Knockdown/knockout RNA-Seq assay for TAF2 is not available on ENCORE database.





81 RBPs can affect the gene expression of TAF2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TAF2ENSG00000064313.71330.73600725.096800.875909.267508.35720HepG2AKAP1
TAF2ENSG00000064313.7467.30780653.71560-0.484302.528401.63480HepG2BCCIP
TAF2ENSG00000064313.7659.814501030.43200-0.643106.861805.96700HepG2BOP1
TAF2ENSG00000064313.7744.31560946.00290-0.345902.182901.56270HepG2CPSF6
TAF2ENSG00000064313.7639.03930856.38920-0.422405.022804.06710HepG2DAZAP1
TAF2ENSG00000064313.7435.53500572.27400-0.393902.477701.54850HepG2DHX30
TAF2ENSG00000064313.7454.59700593.33330-0.384302.961702.23900HepG2DNAJC21
TAF2ENSG00000064313.7419.20870588.11330-0.488405.357904.49470HepG2DNAJC2
TAF2ENSG00000064313.7312.82360573.58180-0.874707.623906.67620HepG2EIF2S1
TAF2ENSG00000064313.7628.47450470.121000.418702.525201.65740HepG2EIF3D
TAF2ENSG00000064313.7912.48380633.866500.525503.633402.90310HepG2EIF4A3
TAF2ENSG00000064313.71127.33110854.109700.400302.251101.55310HepG2FIP1L1
TAF2ENSG00000064313.7556.76600418.583100.411502.264701.46160HepG2GEMIN5
TAF2ENSG00000064313.7599.676201072.39590-0.838608.791307.69330HepG2GPKOW
TAF2ENSG00000064313.7467.05450599.01780-0.359002.068001.50000HepG2HNRNPA1
TAF2ENSG00000064313.7449.33870666.30290-0.568404.501503.63110HepG2HNRNPC
TAF2ENSG00000064313.7700.37030906.50130-0.372203.621302.80960HepG2HNRNPF
TAF2ENSG00000064313.7713.688201023.40460-0.520004.249903.48460HepG2HNRNPLL
TAF2ENSG00000064313.7831.99670603.053400.464203.248202.52270HepG2IGF2BP2
TAF2ENSG00000064313.7922.89580639.794900.528504.010703.22210HepG2MAGOH
TAF2ENSG00000064313.7938.12140643.371400.544003.836703.10370HepG2MATR3
TAF2ENSG00000064313.7700.13040907.42370-0.374202.521201.80580HepG2NSUN2
TAF2ENSG00000064313.7445.18990590.35840-0.407203.267902.47260HepG2PPIL4
TAF2ENSG00000064313.7580.33300810.65400-0.482203.957203.25830HepG2PUF60
TAF2ENSG00000064313.7690.44960859.92550-0.316702.216201.61330HepG2PUM2
TAF2ENSG00000064313.7889.44540664.036300.421503.869903.14780HepG2QKI
TAF2ENSG00000064313.7976.71190645.472800.597502.971602.24230HepG2RAVER1
TAF2ENSG00000064313.7790.63860602.659900.391602.962102.26800HepG2RBM25
TAF2ENSG00000064313.7937.60960682.363500.458305.150404.44960HepG2NELFE
TAF2ENSG00000064313.7771.49860635.536900.279602.117401.56920HepG2RECQL
TAF2ENSG00000064313.7325.74920490.51820-0.590503.227602.38760HepG2RRP9
TAF2ENSG00000064313.7419.99500589.44500-0.489004.895104.07900HepG2SAFB2
TAF2ENSG00000064313.71442.57380942.036800.614704.227803.38520HepG2SF3A3
TAF2ENSG00000064313.71296.261201012.984500.355602.668101.97550HepG2SF3B1
TAF2ENSG00000064313.7738.726101127.11710-0.609503.674702.76940HepG2SNRNP70
TAF2ENSG00000064313.71371.399901127.937300.281903.254102.72490HepG2SRFBP1
TAF2ENSG00000064313.71251.83830666.303300.9097021.1320020.08220HepG2SRSF1
TAF2ENSG00000064313.7596.82760800.43150-0.423504.272203.52390HepG2SRSF5
TAF2ENSG00000064313.7470.72110639.84160-0.442802.221701.60670HepG2SUPV3L1
TAF2ENSG00000064313.7600.47900997.42870-0.732108.152406.99570HepG2TARDBP
TAF2ENSG00000064313.7492.14510643.13280-0.386002.812202.30850HepG2TIAL1
TAF2ENSG00000064313.7459.48220648.90780-0.498005.315204.58490HepG2TRIM56
TAF2ENSG00000064313.7610.05410792.01380-0.376602.654701.80020HepG2TUFM
TAF2ENSG00000064313.71007.35930730.618500.463303.352502.66650HepG2U2AF1
TAF2ENSG00000064313.71089.45430806.586700.433605.649004.84250HepG2UTP3
TAF2ENSG00000064313.7372.04280629.85350-0.759505.953704.90100HepG2XRN2
TAF2ENSG00000064313.71128.28160918.826800.296202.613602.07830HepG2ZNF622
TAF2ENSG00000064313.71630.500501285.716800.342603.027801.78590K562AARS
TAF2ENSG00000064313.72479.033303090.57470-0.318102.780901.55530K562ABCF1
TAF2ENSG00000064313.71254.099401598.06270-0.349704.835204.11950K562AGGF1
TAF2ENSG00000064313.71141.947101339.53740-0.230202.176201.32310K562BCLAF1
TAF2ENSG00000064313.71269.350501881.29950-0.567606.238204.91570K562BOP1
TAF2ENSG00000064313.72118.554502587.71620-0.288602.813801.69750K562CPEB4
TAF2ENSG00000064313.71268.037402000.34880-0.6577011.021609.44090K562CPSF6
TAF2ENSG00000064313.71451.709301757.39810-0.275703.265801.94420K562DDX21
TAF2ENSG00000064313.7880.476901080.40770-0.295202.241001.31170K562DDX3X
TAF2ENSG00000064313.7892.602801095.36690-0.295302.721001.42980K562DDX6
TAF2ENSG00000064313.7937.352801186.63350-0.340203.996702.52430K562EIF2S1
TAF2ENSG00000064313.71365.535401827.03910-0.420006.054405.05250K562EIF2S2
TAF2ENSG00000064313.71382.268601128.721600.292202.066301.35360K562EIF4A3
TAF2ENSG00000064313.7830.293401016.43900-0.291802.540701.45090K562EIF4B
TAF2ENSG00000064313.71577.836902221.47430-0.493605.659604.42030K562FIP1L1
TAF2ENSG00000064313.71491.358802035.33130-0.448604.598203.49260K562FMR1
TAF2ENSG00000064313.71381.941501725.13720-0.320002.171501.36650K562FTO
TAF2ENSG00000064313.71637.804701173.816500.480507.317406.39690K562FXR1
TAF2ENSG00000064313.71323.896301909.83090-0.528706.478305.26710K562GPKOW
TAF2ENSG00000064313.71657.511602434.86850-0.554807.694506.42110K562GRSF1
TAF2ENSG00000064313.7720.958501407.49040-0.965107.165906.24910K562HNRNPC
TAF2ENSG00000064313.71620.079802420.09820-0.579008.674806.72890K562HNRNPL
TAF2ENSG00000064313.71301.126201827.11970-0.489804.190103.02770K562HNRNPM
TAF2ENSG00000064313.72008.485103011.95210-0.584607.914506.58510K562HSPD1
TAF2ENSG00000064313.71386.971101689.24200-0.284402.467201.47110K562MAK16
TAF2ENSG00000064313.71317.717201864.21230-0.500505.928904.61740K562METAP2
TAF2ENSG00000064313.71693.634201971.38440-0.219102.559501.78020K562MTPAP
TAF2ENSG00000064313.71646.952502190.52060-0.411507.326706.19360K562NSUN2
TAF2ENSG00000064313.71333.326201836.38290-0.461803.927502.03370K562PKM
TAF2ENSG00000064313.71782.115501420.317900.327303.351402.46380K562POLR2G
TAF2ENSG00000064313.71707.908602521.70510-0.562207.035005.61360K562PPIG
TAF2ENSG00000064313.71525.528401174.739900.376903.053902.26500K562PRPF8
TAF2ENSG00000064313.7854.913001261.88190-0.561702.737401.83910K562PSIP1
TAF2ENSG00000064313.72654.157303593.71610-0.437203.087002.07540K562PUM2
TAF2ENSG00000064313.7880.282901114.64770-0.340502.720701.40080K562RBM25
TAF2ENSG00000064313.7708.732801201.22400-0.761206.285904.31320K562RRP9
TAF2ENSG00000064313.71753.797001308.395800.422603.872002.14500K562SDAD1
TAF2ENSG00000064313.71733.292702161.28330-0.318402.787501.96990K562SF3A3
TAF2ENSG00000064313.71097.610601410.88210-0.362202.944101.85540K562SRSF5
TAF2ENSG00000064313.71256.756501568.44070-0.319603.065601.82820K562SRSF7
TAF2ENSG00000064313.71922.258401424.598500.432105.547504.37830K562SYNCRIP
TAF2ENSG00000064313.71167.493001512.18480-0.373202.553401.87190K562TARDBP
TAF2ENSG00000064313.71032.215601458.64310-0.498905.961604.69000K562TIA1
TAF2ENSG00000064313.7867.241801176.44000-0.439904.768903.71770K562U2AF2
TAF2ENSG00000064313.71816.894702322.64470-0.354303.012302.26270K562UPF1
TAF2ENSG00000064313.71644.651601987.43120-0.273102.375901.56310K562WDR3
TAF2ENSG00000064313.72118.329402742.83080-0.372704.112102.53330K562WRN
TAF2ENSG00000064313.71771.213702608.10850-0.558307.656906.10120K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TAF2 is not available on ENCORE database.





11 RBPs can affect the splicing of TAF2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETAF2ENSG00000064313.7chr8-120757120120757276120756527120756633120758944120759174-0.219000.002040.03707excludedK562SRSF1
SETAF2ENSG00000064313.7chr8-1208070191208071841208056051208056911208077711208078710.091000.001310.04568includedK562PRPF8
SETAF2ENSG00000064313.7chr8-120809229120809343120807771120807871120809901120810086-0.295000.005060.07681excludedHepG2U2AF1
SETAF2ENSG00000064313.7chr8-120809229120809343120807771120807871120809901120810086-0.342000.000680.01010excludedHepG2U2AF2
SETAF2ENSG00000064313.7chr8-1207571201207572761207565271207566331207589441207591740.164000.003410.03400includedK562AQR
SETAF2ENSG00000064313.7chr8-120768245120768355120758944120759174120770312120770382-0.142000.000000.00000excludedK562AQR
SETAF2ENSG00000064313.7chr8-120809229120809343120807771120807871120809901120810149-0.081000.000740.00944excludedK562AQR
SETAF2ENSG00000064313.7chr8-120790258120790369120774654120774848120793292120793433-0.105000.001220.01447excludedK562AQR
SETAF2ENSG00000064313.7chr8-120805605120805691120803563120803699120807771120807871-0.141000.000500.01277excludedK562U2AF1
SETAF2ENSG00000064313.7chr8-1208070191208071841208056051208056911208077711208078710.187000.000000.00000includedK562HNRNPL
SETAF2ENSG00000064313.7chr8-120757120120757276120756527120756633120758944120759174-0.185000.000150.03349excludedK562EIF4G2
SETAF2ENSG00000064313.7chr8-120805605120805691120803563120803699120807771120807871-0.075000.001530.04699excludedK562UTP18
SETAF2ENSG00000064313.7chr8-120805605120805691120803563120803699120807771120807871-0.143000.000090.00269excludedK562U2AF2
SETAF2ENSG00000064313.7chr8-1207571201207572761207565271207566331207589441207591740.395000.000000.00004includedK562HNRNPU
SETAF2ENSG00000064313.7chr8-120805605120805691120803563120803699120807771120807871-0.095000.000390.01308excludedK562AGGF1
SETAF2ENSG00000064313.7chr8-1207571201207572761207565271207566331207589441207591740.309000.000490.02482includedHepG2HNRNPU
SETAF2ENSG00000064313.7chr8-1207738471207740121207726941207729781207746541207747740.169000.000210.01130includedHepG2HNRNPC
SETAF2ENSG00000064313.7chr8-1207738471207740121207726941207729781207746541207747740.275000.000000.00000includedK562HNRNPC
SETAF2ENSG00000064313.7chr8-120805605120805691120803563120803699120807771120807871-0.121000.006550.08562excludedK562HNRNPC
A3SSTAF2ENSG00000064313.7chr8-1208099011208101491208099011208100861208140331208142650.128000.000000.00000longerK562AQR
A3SSTAF2ENSG00000064313.7chr8-1207443011207444961207443011207444261207547731207549340.072000.000160.00134longerK562AQR
A3SSTAF2ENSG00000064313.7chr8-1208005771208007061208005771208006871208010291208011730.110000.000000.00000longerK562AQR
A3SSTAF2ENSG00000064313.7chr8-1207902581207904361207902581207903691207932921207934330.074000.000130.00107longerK562AQR
A3SSTAF2ENSG00000064313.7chr8-1208315851208317681208315851208317461208439161208439710.143000.000040.00036longerK562AQR
A3SSTAF2ENSG00000064313.7chr8-1208035631208037401208035631208036991208056051208056910.118000.000000.00000longerK562AQR
A5SSTAF2ENSG00000064313.7chr8-1208017861208019861208018311208019861208010291208011440.074000.000020.00067longerK562AQR
MXETAF2ENSG00000064313.7chr8-1208056051208056911208070191208071841208035631208036991208077711208078710.060000.000210.027071includedK562HNRNPL
MXETAF2ENSG00000064313.7chr8-1208185221208186411208315851208317681208161171208162591208439161208439710.119000.000110.001281includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TAF2 is not avaliable on ENCORE database.