STAM

General Information

Gene Name : STAM
Gene ID : ENSG00000136738.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: STAM)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	STAM	ENSG00000136738.14	10.08	10.54	10.31	ENCSR000AEF
HepG2	STAM	ENSG00000136738.14	15.73	25.69	20.71	ENCSR985KAT
K562	STAM	ENSG00000136738.14	20.70	22.50	21.60	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for STAM is not avaliable on ENCORE database.

Proteins bound to RNA

STAM RNA is bound by 29 proteins.

CanvasJS.com

eCLIP assay for STAM is not avaliable on ENCORE database.

29 proteins are bound to STAM RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	17757087	17757173	+	3'-UTR	5.40627	17.26615	K562	PUM2
chr10	17735309	17735360	+	CDS,intron-Proximal	5.37133	13.75908	K562	AQR
chr10	17751214	17751319	+	intron-Distal	3.97859	11.01904	K562	KHSRP
chr10	17756845	17756898	+	3'-UTR	3.80721	10.82616	K562	YBX3
chr10	17757771	17757845	+	3'-UTR	3.10010	10.54019	K562	PUM2
chr10	17746521	17746587	+	intron-Proximal	5.71192	10.48996	K562	AQR
chr10	17699859	17699905	+	intron-Distal	3.70318	10.01558	K562	EXOSC5
chr10	17712828	17712904	+	intron-Distal	5.50069	9.81815	K562	KHSRP
chr10	17737235	17737315	+	CDS,intron-Proximal	4.82359	9.04436	K562	AQR
chr10	17702461	17702550	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.67689	8.74774	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 94 entries

eCLIP assay for STAM is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for STAM is not available on ENCORE database.
73 RBPs can affect the levels of STAM.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for STAM is not available on ENCORE database.

73 RBPs can affect the gene expression of STAM :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
STAM	ENSG00000136738.10	1432.38940	727.30470	0.97770	29.59880	28.11190	HepG2	ACO1
STAM	ENSG00000136738.10	1880.48150	1098.84180	0.77500	26.39980	25.14700	HepG2	ZNF622
STAM	ENSG00000136738.10	3326.48650	1798.34630	0.88720	26.96260	25.02280	K562	RBM15
STAM	ENSG00000136738.10	1941.91300	1108.07620	0.80930	19.48010	18.46590	HepG2	SRFBP1
STAM	ENSG00000136738.10	3457.90600	1845.62100	0.90570	17.42320	16.10160	K562	PUS1
STAM	ENSG00000136738.10	2314.06540	773.90620	1.58010	17.18650	15.57570	HepG2	RAVER1
STAM	ENSG00000136738.10	1739.04600	940.47010	0.88670	15.44110	14.16490	HepG2	CELF1
STAM	ENSG00000136738.10	1177.29360	740.80030	0.66820	13.40650	12.22600	HepG2	PUS1
STAM	ENSG00000136738.10	1868.22470	1229.78590	0.60320	13.04480	12.18240	HepG2	SRSF1
STAM	ENSG00000136738.10	2094.93230	1093.71590	0.93760	12.25840	10.80650	HepG2	FIP1L1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 86 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for STAM is not available on ENCORE database.

12 RBPs can affect the splicing of STAM :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	STAM	ENSG00000136738.10	chr10	+	17742189	17742278			17738773	17738868	17746429	17746517	-0.05300	0.00037	excluded	K562	AKAP8L
SE	STAM	ENSG00000136738.10	chr10	+	17742189	17742278			17738773	17738868	17746429	17746517	-0.12400	0.00000	excluded	K562	PUS1
SE	STAM	ENSG00000136738.10	chr10	+	17746968	17747023			17746429	17746517	17747586	17747740	-0.10700	0.00000	excluded	K562	PUS1
SE	STAM	ENSG00000136738.10	chr10	+	17742189	17742278			17738773	17738868	17746429	17746517	-0.07200	0.00001	excluded	K562	UTP18
SE	STAM	ENSG00000136738.10	chr10	+	17742189	17742278			17738773	17738868	17746429	17746517	-0.06000	0.00002	excluded	K562	RBM15
SE	STAM	ENSG00000136738.10	chr10	+	17742189	17742278			17738773	17738868	17746429	17746517	-0.06900	0.00001	excluded	K562	AGGF1
A3SS	STAM	ENSG00000136738.10	chr10	+	17738751	17738868			17738773	17738868	17737047	17737240	0.12900	0.00000	longer	K562	AQR
A3SS	STAM	ENSG00000136738.10	chr10	+	17750742	17750950			17750774	17750950	17747586	17747740	0.08100	0.00001	longer	K562	AQR
MXE	STAM	ENSG00000136738.10	chr10	+	17738751	17738868	17742189	17742278	17737047	17737240	17746429	17746517	0.11500	0.00000	1included	K562	AQR
MXE	STAM	ENSG00000136738.10	chr10	+	17738751	17738868	17742167	17742278	17737047	17737240	17746429	17746517	0.12200	0.00000	1included	K562	AQR

Showing 1 to 10 of 25 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

STAM

General Information

Functions

Localization

Domains (AlphaFold: STAM)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for STAM is not avaliable on ENCORE database.

29 proteins are bound to STAM RNA:

eCLIP assay for STAM is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for STAM is not available on ENCORE database.

73 RBPs can affect the gene expression of STAM :

The Knockdown/knockout RNA-Seq assay for STAM is not available on ENCORE database.

12 RBPs can affect the splicing of STAM :

The Knockdown/knockout RNA-Seq assay for STAM is not avaliable on ENCORE database.