STAM

General Information

Gene Name       : STAM
Gene ID             : ENSG00000136738.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STAM)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STAMENSG00000136738.1410.0810.5410.31ENCSR000AEF
HepG2STAMENSG00000136738.1415.7325.6920.71ENCSR985KAT
K562STAMENSG00000136738.1420.7022.5021.60ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STAM is not avaliable on ENCORE database.



Proteins bound to RNA
  • STAM RNA is bound by 29 proteins.  







eCLIP assay for STAM is not avaliable on ENCORE database.





29 proteins are bound to STAM RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr101775684517756898+3'-UTR3.8072110.82616K562YBX3
chr101775705617757160+3'-UTR5.268204.95154K562ZC3H11A
chr101775708717757173+3'-UTR5.4062717.26615K562PUM2
chr101775777117757845+3'-UTR3.1001010.54019K562PUM2
chr101775676217756829+3'-UTR,CDS3.054983.90516K562IGF2BP1
chr101770251117702549+5'-UTR,CDS,intron-Distal,intron-Proximal3.198834.02291HepG2GRWD1
chr101768634517686422+5'-UTR,CDS,intron-Proximal3.559558.72457K562RBM15
chr101768624817686317+5'-UTR3.615796.19583K562RBM15
chr101770246417702499+5'-UTR,CDS,intron-Distal3.306924.74886HepG2BCLAF1
chr101770247717702511+5'-UTR,CDS,intron-Distal3.149363.60157HepG2GRWD1
chr101768617017686241+5'-UTR4.339677.13477K562DDX3X
chr101770246117702550+5'-UTR,CDS,intron-Distal,intron-Proximal3.676898.74774HepG2PPIG
chr101768631917686381+5'-UTR,CDS,intron-Proximal3.446174.69091K562DDX3X
chr101768634917686378+5'-UTR,CDS3.788643.38114HepG2GRWD1
chr101773719617737238+CDS4.991346.71715HepG2BCLAF1
chr101775085717750950+CDS5.013726.40308HepG2IGF2BP1
chr101774758717747597+CDS3.199873.26275K562BUD13
chr101773722917737239+CDS3.713114.49887K562ZNF622
chr101775087417750932+CDS3.835343.14999HepG2GRWD1
chr101773702117737103+CDS,intron-Proximal3.285578.13694K562AQR
chr101773876017738805+CDS,intron-Proximal3.790326.66119K562GPKOW
chr101775086417750951+CDS,intron-Proximal3.085695.39469K562IGF2BP1
chr101773530917735360+CDS,intron-Proximal5.3713313.75908K562AQR
chr101774697517747012+CDS3.428104.22563K562UCHL5
chr101773874917738802+CDS,intron-Proximal3.245733.95292K562AQR
chr101775668217756762+CDS3.338823.90516K562IGF2BP1
chr101773720917737236+CDS3.135623.59602K562UCHL5
chr101775666017756769+CDS3.543647.97300K562IGF2BP2
chr101773723517737315+CDS,intron-Proximal4.823599.04436K562AQR
chr101773562517735699+intron-Distal3.050044.88652K562KHSRP
chr101775512417755230+intron-Distal3.465504.72029K562MATR3
chr101770039917700449+intron-Distal5.233818.69609K562EXOSC5
chr101775532917755408+intron-Distal3.746255.56133HepG2SUGP2
chr101775637717756468+intron-Distal,intron-Proximal3.707305.95946K562KHSRP
chr101769065417690834+intron-Distal4.794515.51760K562MATR3
chr101770001517700037+intron-Distal3.507024.31711K562EXOSC5
chr101771290417712967+intron-Distal4.595835.62258K562KHSRP
chr101769905317699095+intron-Distal3.040305.41777K562EXOSC5
chr101771282817712904+intron-Distal5.500699.81815K562KHSRP
chr101772471417724765+intron-Distal3.846053.01445K562EXOSC5
chr101771341217713469+intron-Distal4.455774.51735HepG2QKI
chr101771274417712825+intron-Distal3.427105.96041K562KHSRP
chr101772694117726968+intron-Distal,intron-Proximal5.066316.75320K562AQR
chr101770964217709735+intron-Distal3.902563.16986HepG2QKI
chr101772934917729438+intron-Distal3.036636.30233HepG2ILF3
chr101773505117735108+intron-Distal3.357973.40427K562U2AF1
chr101775515217755227+intron-Distal3.376873.69083K562PTBP1
chr101769915517699194+intron-Distal3.743984.91037K562EXOSC5
chr101772423317724285+intron-Distal4.109104.31512K562KHSRP
chr101771297017712995+intron-Distal4.530805.62258K562KHSRP
chr101772396317724026+intron-Distal4.546344.54401K562KHSRP
chr101775151917751579+intron-Distal3.573485.35459K562KHSRP
chr101769985917699905+intron-Distal3.7031810.01558K562EXOSC5
chr101772345817723555+intron-Distal3.387534.14287K562KHSRP
chr101773728117737378+intron-Distal,intron-Proximal4.808436.08021K562PRPF8
chr101770750517707593+intron-Distal3.797834.93120K562KHSRP
chr101773607517736109+intron-Distal4.007395.78005K562KHSRP
chr101772480517724891+intron-Distal3.468005.34873K562KHSRP
chr101775283317752887+intron-Distal3.965753.29248HepG2SUGP2
chr101769891117698976+intron-Distal3.036475.13755K562EXOSC5
chr101770564517705716+intron-Distal3.720303.02234K562KHSRP
chr101770553417705623+intron-Distal3.992115.36899HepG2PTBP1
chr101768888517688932+intron-Distal4.419356.09580K562HNRNPL
chr101773557917735625+intron-Distal3.030805.42680K562KHSRP
chr101775228517752388+intron-Distal3.917957.03506HepG2SUGP2
chr101773687417736968+intron-Distal,intron-Proximal3.724107.84449K562KHSRP
chr101772357317723637+intron-Distal4.093915.95946K562KHSRP
chr101770478117704827+intron-Distal3.922023.63454HepG2SUGP2
chr101775512517755231+intron-Distal3.827756.73852HepG2SUGP2
chr101772447217724521+intron-Distal4.131913.89294K562KHSRP
chr101770456817704620+intron-Distal3.920213.79098HepG2SUGP2
chr101770021817700252+intron-Distal3.696274.31711K562EXOSC5
chr101772414317724195+intron-Distal3.193514.10408K562KHSRP
chr101775608117756157+intron-Distal4.746257.14375HepG2SUGP2
chr101770429617704394+intron-Distal3.475835.96782K562MATR3
chr101773610917736141+intron-Distal3.554496.18396K562KHSRP
chr101775576217755879+intron-Distal4.633816.10726HepG2SUGP2
chr101773614117736163+intron-Distal3.465805.57010K562KHSRP
chr101769061417690694+intron-Distal3.543094.70733K562HNRNPL
chr101775121417751319+intron-Distal3.9785911.01904K562KHSRP
chr101773623317736276+intron-Distal3.153424.10408K562KHSRP
chr101769870117698724+intron-Distal4.164773.59909K562EXOSC5
chr101770033517700348+intron-Distal5.334714.53244K562HNRNPM
chr101770233417702445+intron-Distal,intron-Proximal3.074323.76473K562KHSRP
chr101768664717686764+intron-Distal3.467904.37001K562EFTUD2
chr101770034817700414+intron-Distal5.694956.10662K562HNRNPM
chr101773505317735121+intron-Distal3.699446.86521K562U2AF2
chr101774198417742124+intron-Distal,intron-Proximal3.216954.56635K562KHSRP
chr101773616317736215+intron-Distal3.334586.17398K562KHSRP
chr101769864417698696+intron-Distal3.190086.26462K562EXOSC5
chr101774702517747089+intron-Proximal3.467665.75231K562AQR
chr101773698517737032+intron-Proximal5.239727.41223K562SF3B4
chr101775097017751030+intron-Proximal3.910713.25538K562KHSRP
chr101774652117746587+intron-Proximal5.7119210.48996K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STAM is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STAM is not available on ENCORE database.

  • 73 RBPs can affect the levels of STAM.  








The Knockdown/knockout RNA-Seq assay for STAM is not available on ENCORE database.





73 RBPs can affect the gene expression of STAM :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STAMENSG00000136738.101432.38940727.304700.9777029.5988028.11190HepG2ACO1
STAMENSG00000136738.101089.355401366.71690-0.327201.780001.34350HepG2AKAP1
STAMENSG00000136738.101501.633501022.371800.554508.092107.01800HepG2AUH
STAMENSG00000136738.101713.176801299.447300.398702.868402.25920HepG2BOP1
STAMENSG00000136738.101536.37940976.838900.6532010.054908.72250HepG2CALR
STAMENSG00000136738.101739.04600940.470100.8867015.4411014.16490HepG2CELF1
STAMENSG00000136738.101018.70160627.530700.698908.125307.02650HepG2DDX21
STAMENSG00000136738.101351.91500877.180600.624007.276505.28040HepG2DDX47
STAMENSG00000136738.101074.74200752.823300.513504.019503.10580HepG2DDX55
STAMENSG00000136738.10762.74220595.318300.357402.171001.36080HepG2EIF3D
STAMENSG00000136738.102094.932301093.715900.9376012.2584010.80650HepG2FIP1L1
STAMENSG00000136738.10871.458301205.46490-0.468103.640202.85410HepG2FXR1
STAMENSG00000136738.10804.403601118.28590-0.475303.446702.70800HepG2G3BP1
STAMENSG00000136738.10801.034001107.02970-0.466806.244405.22590HepG2HNRNPF
STAMENSG00000136738.10738.001701132.27130-0.617506.247205.22630HepG2HNRNPK
STAMENSG00000136738.10732.68710921.18910-0.330302.762902.08990HepG2HNRNPL
STAMENSG00000136738.10728.653401090.11010-0.581207.281306.15830HepG2IGF2BP1
STAMENSG00000136738.101322.58800885.129600.579306.886605.66720HepG2MSI2
STAMENSG00000136738.10957.84900743.259200.365802.779901.56120HepG2NAA15
STAMENSG00000136738.101244.85870625.638100.992507.579906.05710HepG2PABPC1
STAMENSG00000136738.101177.29360740.800300.6682013.4065012.22600HepG2PUS1
STAMENSG00000136738.102314.06540773.906201.5801017.1865015.57570HepG2RAVER1
STAMENSG00000136738.101825.76150981.030200.8960011.1906010.29980HepG2RBM22
STAMENSG00000136738.10945.749801259.41590-0.413205.237604.53150HepG2NELFE
STAMENSG00000136738.10786.910401172.93500-0.575909.300708.27030HepG2RECQL
STAMENSG00000136738.10749.40310579.318700.371302.558101.96490HepG2RPS19
STAMENSG00000136738.10873.57940574.690000.604104.970303.95080HepG2RRP9
STAMENSG00000136738.101528.384401126.598800.439902.380701.75630HepG2SF3A3
STAMENSG00000136738.101120.24850873.364700.359104.770503.96400HepG2SMN1
STAMENSG00000136738.101941.913001108.076200.8093019.4801018.46590HepG2SRFBP1
STAMENSG00000136738.101868.224701229.785900.6032013.0448012.18240HepG2SRSF1
STAMENSG00000136738.10869.206301087.61360-0.323403.387302.62770HepG2SRSF7
STAMENSG00000136738.101207.233801000.479800.270902.750502.20030HepG2SRSF9
STAMENSG00000136738.101301.08700962.139900.435305.786105.09650HepG2SSB
STAMENSG00000136738.101473.756601074.851800.455307.853306.89310HepG2SUCLG1
STAMENSG00000136738.101067.52770738.484400.531505.818604.47750HepG2SUPT6H
STAMENSG00000136738.10598.96560824.42940-0.460905.600104.85000HepG2TRIM56
STAMENSG00000136738.10731.02170935.14830-0.355302.731901.86410HepG2TUFM
STAMENSG00000136738.101442.12330935.573000.624204.062403.30670HepG2U2AF1
STAMENSG00000136738.101322.54920964.612100.455206.963806.08760HepG2UTP3
STAMENSG00000136738.10511.04040737.78060-0.529803.122302.35320HepG2XRN2
STAMENSG00000136738.101880.481501098.841800.7750026.3998025.14700HepG2ZNF622
STAMENSG00000136738.102360.554601788.571500.400207.351506.49150K562AGGF1
STAMENSG00000136738.102493.894401861.101000.422103.000402.31950K562AKAP8L
STAMENSG00000136738.102411.066201527.249100.658608.700007.75500K562AQR
STAMENSG00000136738.102440.102901952.764200.321302.791501.87370K562ATP5C1
STAMENSG00000136738.101497.289401132.444200.402804.452602.52780K562CEBPZ
STAMENSG00000136738.102631.404001731.986200.603303.574402.33880K562CNOT7
STAMENSG00000136738.101517.378901808.56400-0.253302.753601.65170K562CPEB4
STAMENSG00000136738.103486.471402617.487600.413506.140404.69570K562CELF1
STAMENSG00000136738.101552.408001301.600100.254102.499401.35250K562DDX21
STAMENSG00000136738.101001.08850797.020100.328802.230501.41120K562EFTUD2
STAMENSG00000136738.10971.057101158.41790-0.254502.150701.50300K562EIF2S2
STAMENSG00000136738.10945.986701113.61010-0.235401.844801.33070K562FXR1
STAMENSG00000136738.10555.60440799.06220-0.524203.791102.08310K562GEMIN5
STAMENSG00000136738.101519.351701253.109300.277802.666601.54490K562GLRX3
STAMENSG00000136738.101240.306801543.75540-0.315702.602701.86790K562GRSF1
STAMENSG00000136738.101414.930001120.481600.336503.017201.89310K562HNRNPA1
STAMENSG00000136738.10729.32940973.69720-0.416903.477402.18660K562HNRNPF
STAMENSG00000136738.101543.184601905.48530-0.304202.350601.61300K562HSPD1
STAMENSG00000136738.103027.020801975.053700.615904.212403.16430K562KIF1C
STAMENSG00000136738.102825.440902269.214700.316202.813301.67310K562MSI2
STAMENSG00000136738.102658.817801550.851000.777605.610204.19900K562NAA15
STAMENSG00000136738.101888.429301463.852900.367307.229906.10480K562NSUN2
STAMENSG00000136738.102497.072701686.585200.566005.804104.59540K562PCBP3
STAMENSG00000136738.101796.184401293.639400.473406.061304.87930K562POLR2G
STAMENSG00000136738.101288.69520775.591400.732408.682607.34910K562PRPF8
STAMENSG00000136738.103457.906001845.621000.9057017.4232016.10160K562PUS1
STAMENSG00000136738.103326.486501798.346300.8872026.9626025.02280K562RBM15
STAMENSG00000136738.101147.827901544.08960-0.427903.389902.27250K562RPS3
STAMENSG00000136738.101205.80950793.039600.604404.380702.69640K562RRP9
STAMENSG00000136738.101592.072501191.774300.417703.644501.97670K562SDAD1
STAMENSG00000136738.102183.438101244.719800.810702.637601.47650K562SF1
STAMENSG00000136738.101808.472001444.424800.324202.853102.02790K562SF3A3
STAMENSG00000136738.101498.888801137.396900.398104.331503.25470K562SF3B4
STAMENSG00000136738.102642.022801430.186000.885303.218701.85930K562SNRNP200
STAMENSG00000136738.101857.790901479.842200.328003.031002.05710K562SRPK2
STAMENSG00000136738.101410.690501131.603800.317902.800002.09020K562SRSF1
STAMENSG00000136738.101628.986401161.544000.487807.688905.74530K562SRSF7
STAMENSG00000136738.101849.230101472.440300.328603.364101.68240K562SRSF9
STAMENSG00000136738.101069.94910798.109500.422804.462102.78130K562SSB
STAMENSG00000136738.101076.09090750.988800.518804.088302.83310K562SUPV3L1
STAMENSG00000136738.101056.56240794.804800.410603.031501.95930K562UCHL5
STAMENSG00000136738.101816.420601328.130400.451605.343604.10570K562WDR3
STAMENSG00000136738.102346.927101809.864600.374804.071202.49810K562WRN
STAMENSG00000136738.102110.983101720.321700.295102.484001.67440K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STAM is not available on ENCORE database.





12 RBPs can affect the splicing of STAM :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESTAMENSG00000136738.10chr10+177024621770254717686123176863781772667317726749-0.184000.000040.00142excludedK562SF3B4
SESTAMENSG00000136738.10chr10+177024621770254717686123176863781772667317726749-0.149000.000800.06886excludedHepG2PRPF8
SESTAMENSG00000136738.10chr10+177421891774227817738773177388681774642917746517-0.053000.000000.00037excludedK562AKAP8L
SESTAMENSG00000136738.10chr10+177469681774702317746429177465171774758617747740-0.055000.000160.00731excludedK562AKAP8L
SESTAMENSG00000136738.10chr10+1771497317715077177024621770254717726673177267490.112000.000660.01905includedHepG2HNRNPK
SESTAMENSG00000136738.10chr10+177421891774227817738773177388681774642917746517-0.053000.003730.03655excludedK562AQR
SESTAMENSG00000136738.10chr10+177024621770254717686123176863781772667317726749-0.134000.000190.00425excludedK562PUS1
SESTAMENSG00000136738.10chr10+177421891774227817738773177388681774642917746517-0.124000.000000.00000excludedK562PUS1
SESTAMENSG00000136738.10chr10+177469681774702317746429177465171774758617747740-0.107000.000000.00000excludedK562PUS1
SESTAMENSG00000136738.10chr10+177421671774227817738773177388681774642917746517-0.083000.000100.08915excludedK562EXOSC5
SESTAMENSG00000136738.10chr10+177421891774227817738773177388681774642917746517-0.072000.000000.00001excludedK562UTP18
SESTAMENSG00000136738.10chr10+177469681774702317746429177465171774758617747740-0.064000.000040.00273excludedK562UTP18
SESTAMENSG00000136738.10chr10+177024621770254717686123176863781772667317726749-0.166000.001250.02407excludedK562U2AF2
SESTAMENSG00000136738.10chr10+177469681774702317746429177465171774758617747740-0.090000.004060.06149excludedK562U2AF2
SESTAMENSG00000136738.10chr10+177024621770254717686123176863781772667317726749-0.100000.003740.07340excludedK562RBM15
SESTAMENSG00000136738.10chr10+177421891774227817738773177388681774642917746517-0.060000.000000.00002excludedK562RBM15
SESTAMENSG00000136738.10chr10+177469681774702317746429177465171774758617747740-0.053000.000160.00655excludedK562RBM15
SESTAMENSG00000136738.10chr10+177024621770254717686123176863781772667317726749-0.138000.000400.01341excludedK562AGGF1
SESTAMENSG00000136738.10chr10+177421891774227817738773177388681774642917746517-0.069000.000000.00001excludedK562AGGF1
A3SSSTAMENSG00000136738.10chr10+177421891774227817742198177422781773884417738868-0.053000.000210.02170shorterHepG2SF3A3
A3SSSTAMENSG00000136738.10chr10+1773875117738868177387731773886817737047177372400.129000.000000.00000longerK562AQR
A3SSSTAMENSG00000136738.10chr10+1775074217750950177507741775095017747586177477400.081000.000000.00001longerK562AQR
MXESTAMENSG00000136738.10chr10+1770246217702547177300251773017217686206176863781773522017735311-0.161000.000170.005072includedK562PUS1
MXESTAMENSG00000136738.10chr10+17738751177388681774218917742278177370471773724017746429177465170.115000.000000.000001includedK562AQR
MXESTAMENSG00000136738.10chr10+17738751177388681774216717742278177370471773724017746429177465170.122000.000000.000001includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for STAM is not avaliable on ENCORE database.