SMARCA5

General Information

Gene Name       : SMARCA5
Gene ID             : ENSG00000153147.5
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SMARCA5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SMARCA5ENSG00000153147.533.2329.0531.14ENCSR000AEF
HepG2SMARCA5ENSG00000153147.515.8928.2122.05ENCSR985KAT
K562SMARCA5ENSG00000153147.525.3626.6926.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SMARCA5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SMARCA5 RNA is bound by 27 proteins.  







eCLIP assay for SMARCA5 is not avaliable on ENCORE database.





27 proteins are bound to SMARCA5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4144475361144475416+3'-UTR3.056734.14964K562UPF1
chr4144475141144475186+3'-UTR3.784194.01928K562FAM120A
chr4144475255144475351+3'-UTR4.3011115.98460K562FAM120A
chr4144474300144474341+3'-UTR,CDS3.149575.26696K562UCHL5
chr4144474729144474784+3'-UTR5.3208116.57890K562PUM2
chr4144475355144475410+3'-UTR4.4950912.97106K562FAM120A
chr4144474928144475014+3'-UTR3.7516714.84500K562PUM2
chr4144475144144475177+3'-UTR4.239893.69433K562UPF1
chr4144475439144475481+3'-UTR3.237803.04446K562FAM120A
chr4144434895144434957+5'-UTR3.589126.12687HepG2RPS3
chr4144434898144434950+5'-UTR3.296136.32494K562UCHL5
chr4144434975144435057+5'-UTR4.790147.64336HepG2GRWD1
chr4144434996144435045+5'-UTR3.859794.71162K562LIN28B
chr4144434951144434996+5'-UTR3.851993.77649K562LIN28B
chr4144434883144434959+5'-UTR3.125493.98124K562GEMIN5
chr4144434883144434975+5'-UTR4.989958.32768HepG2GRWD1
chr4144434912144434971+5'-UTR5.013238.17272HepG2DDX3X
chr4144434737144434788+5'-UTR4.078225.47443HepG2PCBP2
chr4144434727144434798+5'-UTR4.145155.47892K562DDX3X
chr4144464752144464809+CDS4.617228.85766HepG2BCLAF1
chr4144442582144442593+CDS4.741326.23323K562UCHL5
chr4144459811144459865+CDS,intron-Proximal3.547515.42118K562GRWD1
chr4144461629144461643+CDS3.507034.49347K562UCHL5
chr4144459804144459864+CDS3.247033.41732HepG2G3BP1
chr4144446607144446647+CDS3.719567.35414K562ZNF622
chr4144456010144456057+CDS3.691536.97808HepG2BCLAF1
chr4144471181144471252+CDS3.041997.21256K562PUM1
chr4144465058144465124+CDS6.1176016.28863HepG2BCLAF1
chr4144459937144459957+CDS,intron-Proximal4.336276.81811K562UCHL5
chr4144468586144468656+CDS6.0337815.35511HepG2BCLAF1
chr4144469154144469295+CDS,intron-Proximal3.2270423.60760K562UCHL5
chr4144446603144446645+CDS,intron-Proximal5.6225510.71076HepG2BCLAF1
chr4144449778144449828+CDS3.061414.57383K562YBX3
chr4144449836144449867+CDS3.424374.34695HepG2BCLAF1
chr4144466621144466660+CDS,intron-Proximal3.266208.83000K562UCHL5
chr4144465962144465995+CDS3.713803.22245K562GRWD1
chr4144465902144465937+CDS5.550768.40988HepG2BCLAF1
chr4144465004144465049+CDS,intron-Proximal3.3080411.37435K562UCHL5
chr4144471182144471258+CDS,intron-Proximal3.101209.64022K562ZNF800
chr4144471184144471253+CDS3.876274.88141HepG2GRWD1
chr4144438510144438558+CDS3.359318.02704K562BUD13
chr4144465069144465126+CDS,intron-Proximal3.7596710.14758K562ZNF622
chr4144471229144471257+CDS3.025496.07513K562ZNF622
chr4144449007144449083+CDS,intron-Proximal4.299633.74557K562U2AF2
chr4144469080144469094+CDS,intron-Proximal3.185106.93682K562UCHL5
chr4144449007144449055+CDS,intron-Proximal4.100683.60286K562U2AF1
chr4144459937144459959+CDS,intron-Proximal3.130114.61799HepG2BCLAF1
chr4144459854144459864+CDS4.7057810.38007K562UCHL5
chr4144464603144464689+CDS,intron-Proximal3.935877.62845K562SF3B4
chr4144468537144468581+CDS,intron-Proximal4.026863.79347HepG2GRWD1
chr4144474271144474320+CDS,intron-Proximal4.562844.36390K562PUM1
chr4144435231144435312+CDS,intron-Proximal3.848785.64484HepG2PRPF8
chr4144464667144464742+CDS3.694758.50755HepG2BCLAF1
chr4144474270144474325+CDS,intron-Proximal3.158939.00124K562ZNF622
chr4144459816144459865+CDS,intron-Proximal4.856906.78045K562FXR2
chr4144467077144467109+CDS,intron-Proximal3.252664.56058HepG2BCLAF1
chr4144468537144468576+CDS,intron-Proximal4.9530214.37310K562ZNF622
chr4144459813144459866+CDS,intron-Proximal4.033789.50935HepG2BCLAF1
chr4144438523144438582+CDS4.1049210.54329K562UCHL5
chr4144471183144471254+CDS3.5240411.20660HepG2BCLAF1
chr4144474271144474325+CDS,intron-Proximal3.300013.17744HepG2GRWD1
chr4144468011144468059+CDS4.7819316.89898HepG2BCLAF1
chr4144467961144468056+CDS4.353484.96722HepG2G3BP1
chr4144457612144457646+CDS3.318786.02234K562UCHL5
chr4144469222144469261+CDS4.157637.65975HepG2BCLAF1
chr4144456057144456115+CDS3.964128.49795HepG2BCLAF1
chr4144469167144469282+CDS3.8832115.57313K562ZNF622
chr4144468576144468647+CDS3.7555618.77301K562ZNF622
chr4144459798144459862+CDS3.663124.92987K562MTPAP
chr4144469131144469170+CDS5.230927.39496HepG2BCLAF1
chr4144465049144465077+CDS4.0544313.82685K562UCHL5
chr4144465888144465902+CDS,intron-Proximal4.512879.30195HepG2BCLAF1
chr4144445519144445549+CDS,intron-Proximal3.630114.09885HepG2BCLAF1
chr4144467959144468062+CDS,intron-Proximal3.9482016.47696K562ZNF622
chr4144468560144468646+CDS3.563633.14100HepG2FXR2
chr4144469125144469220+CDS3.201337.08636K562GRWD1
chr4144445580144445620+CDS5.457788.86847HepG2BCLAF1
chr4144469149144469290+CDS4.201564.30147K562FXR1
chr4144474269144474330+CDS,intron-Proximal4.211484.00952K562ZNF800
chr4144468540144468586+CDS4.506569.37631HepG2BCLAF1
chr4144467077144467100+CDS,intron-Proximal3.644364.49887K562ZNF622
chr4144467160144467202+CDS,intron-Proximal4.408933.66349K562LIN28B
chr4144469082144469131+CDS4.677369.74753HepG2BCLAF1
chr4144467144144467201+CDS,intron-Proximal3.961373.15232HepG2LIN28B
chr4144467962144468011+CDS4.5931114.65888HepG2BCLAF1
chr4144467939144468053+CDS3.2370416.80791K562UCHL5
chr4144469079144469106+CDS,intron-Proximal3.361303.06626K562GRWD1
chr4144468581144468655+CDS3.711705.97027HepG2GRWD1
chr4144456007144456060+CDS,intron-Proximal3.734403.11149HepG2G3BP1
chr4144469193144469271+CDS4.680875.23563HepG2FXR2
chr4144474275144474325+CDS4.073879.69111HepG2BCLAF1
chr4144468592144468656+CDS4.3728418.53442K562UCHL5
chr4144457604144457692+CDS,intron-Proximal3.7486811.53232HepG2BCLAF1
chr4144469170144469222+CDS4.7203912.88094HepG2BCLAF1
chr4144465005144465034+CDS,intron-Proximal3.658835.91405HepG2BCLAF1
chr4144468537144468592+CDS,intron-Proximal3.6924320.15939K562UCHL5
chr4144465005144465061+CDS,intron-Proximal3.573844.88141HepG2GRWD1
chr4144459846144459971+CDS,intron-Proximal4.483348.09130K562EFTUD2
chr4144465016144465069+CDS3.6119114.18904K562ZNF622
chr4144465940144466001+CDS,intron-Proximal3.867416.39499HepG2GRWD1
chr4144465889144465954+CDS,intron-Proximal3.9370612.71749K562UCHL5
chr4144459800144459854+CDS3.7434311.84285K562UCHL5
chr4144471182144471229+CDS3.5621510.60171K562ZNF622
chr4144442706144442749+CDS,intron-Proximal3.478645.29881K562ZNF800
chr4144445774144445880+intron-Distal5.094239.15655K562KHSRP
chr4144447075144447166+intron-Distal3.499788.24998K562KHSRP
chr4144447299144447402+intron-Distal,intron-Proximal4.210576.59336K562KHSRP
chr4144460202144460277+intron-Distal3.203144.21588K562PRPF8
chr4144448859144448989+intron-Distal,intron-Proximal3.414823.46531K562KHSRP
chr4144447166144447205+intron-Distal4.964318.72817K562KHSRP
chr4144447076144447159+intron-Distal4.387514.00239HepG2KHSRP
chr4144445640144445732+intron-Distal,intron-Proximal3.829426.83037K562KHSRP
chr4144462489144462591+intron-Distal3.458817.68025K562KHSRP
chr4144465278144465368+intron-Distal4.110984.72162K562KHSRP
chr4144462453144462489+intron-Distal4.6344810.28391K562KHSRP
chr4144464530144464590+intron-Distal,intron-Proximal3.868263.24603K562KHSRP
chr4144473915144474059+intron-Distal4.048217.26586K562KHSRP
chr4144447205144447299+intron-Distal3.685107.21887K562KHSRP
chr4144465146144465252+intron-Distal,intron-Proximal4.263024.07352K562KHSRP
chr4144462424144462453+intron-Distal4.439008.75493K562KHSRP
chr4144474078144474131+intron-Distal3.896563.49011K562KHSRP
chr4144471262144471311+intron-Proximal3.823594.00320K562AQR
chr4144460093144460159+intron-Proximal3.808095.29694K562EFTUD2
chr4144474181144474264+intron-Proximal3.818965.78005K562KHSRP
chr4144435287144435295+intron-Proximal5.416115.69951K562AQR
chr4144435254144435267+intron-Proximal5.284594.65563K562AQR
chr4144435272144435287+intron-Proximal5.353345.17615K562AQR
chr4144466755144466779+intron-Proximal4.585048.69247K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SMARCA5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SMARCA5 is not available on ENCORE database.

  • 102 RBPs can affect the levels of SMARCA5.  








The Knockdown/knockout RNA-Seq assay for SMARCA5 is not available on ENCORE database.





102 RBPs can affect the gene expression of SMARCA5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SMARCA5ENSG00000153147.53202.538302580.728300.311305.841005.02150HepG2ACO1
SMARCA5ENSG00000153147.55951.663303236.596000.8787012.4746011.42720HepG2AKAP1
SMARCA5ENSG00000153147.53003.632502592.925800.212002.596701.85060HepG2AKAP8L
SMARCA5ENSG00000153147.51601.813902302.38100-0.523404.230303.14010HepG2BCLAF1
SMARCA5ENSG00000153147.53104.895304599.28820-0.566908.070507.11220HepG2BOP1
SMARCA5ENSG00000153147.52796.737004222.48610-0.594308.103006.97690HepG2CPSF6
SMARCA5ENSG00000153147.52726.307003341.95410-0.293704.137303.38150HepG2CELF1
SMARCA5ENSG00000153147.52698.141803593.44370-0.4134011.4386010.09520HepG2DAZAP1
SMARCA5ENSG00000153147.51463.869302037.65230-0.477105.461704.11150HepG2DHX30
SMARCA5ENSG00000153147.51483.268602112.69000-0.510309.153607.92880HepG2DNAJC21
SMARCA5ENSG00000153147.51479.709402093.88190-0.5009012.7072011.41830HepG2DNAJC2
SMARCA5ENSG00000153147.52632.007802086.941800.334702.744001.82720HepG2EEF2
SMARCA5ENSG00000153147.52758.410301694.199800.703109.423107.85230HepG2EIF3D
SMARCA5ENSG00000153147.52279.473502829.36790-0.311801.898201.36480HepG2EIF4A3
SMARCA5ENSG00000153147.54156.946302754.868000.593404.808203.91620HepG2EIF4B
SMARCA5ENSG00000153147.53099.277003545.13330-0.193902.093301.34880HepG2EIF4G1
SMARCA5ENSG00000153147.52548.995003396.01430-0.413904.308903.30750HepG2EIF4G2
SMARCA5ENSG00000153147.53266.001702648.217300.302402.024501.45200HepG2G3BP1
SMARCA5ENSG00000153147.53008.225604786.76070-0.670108.193707.13350HepG2GPKOW
SMARCA5ENSG00000153147.51711.579002372.43800-0.471005.463004.51560HepG2HNRNPC
SMARCA5ENSG00000153147.52174.958803124.51780-0.5226011.8060010.46550HepG2HNRNPF
SMARCA5ENSG00000153147.52411.932903273.35900-0.4406012.5330011.19350HepG2HNRNPL
SMARCA5ENSG00000153147.53541.670504568.07180-0.367202.741702.11480HepG2HNRNPLL
SMARCA5ENSG00000153147.51549.932802356.75660-0.6046015.3691014.03620HepG2HNRNPU
SMARCA5ENSG00000153147.52018.901203076.78300-0.6079010.827709.48940HepG2IGF2BP1
SMARCA5ENSG00000153147.52079.619002407.35750-0.211102.855902.11330HepG2ILF2
SMARCA5ENSG00000153147.51951.506302359.16350-0.273704.612103.30400HepG2KIF1C
SMARCA5ENSG00000153147.52130.655402855.83980-0.422603.665502.91090HepG2MAGOH
SMARCA5ENSG00000153147.54715.251602871.802600.715306.399705.47270HepG2MATR3
SMARCA5ENSG00000153147.53351.491704658.30690-0.475002.998701.98540HepG2MTPAP
SMARCA5ENSG00000153147.52519.557603563.25010-0.500009.130007.77290HepG2NOL12
SMARCA5ENSG00000153147.53105.448804050.29240-0.383203.706802.84360HepG2NSUN2
SMARCA5ENSG00000153147.51640.512002102.04740-0.357604.802603.85750HepG2PPIL4
SMARCA5ENSG00000153147.52444.270002010.031000.282102.260401.52760HepG2PRPF8
SMARCA5ENSG00000153147.52143.060102628.65190-0.294704.958704.17770HepG2PUS1
SMARCA5ENSG00000153147.54408.444102519.213800.807205.977304.96770HepG2RAVER1
SMARCA5ENSG00000153147.52893.880403472.12410-0.262802.685801.83930HepG2RBM15
SMARCA5ENSG00000153147.55377.640303590.104500.5828015.1435014.13060HepG2RBM22
SMARCA5ENSG00000153147.53303.688902879.266500.198302.479701.96280HepG2NELFE
SMARCA5ENSG00000153147.52319.971703365.49850-0.536706.186405.22140HepG2RPLP0
SMARCA5ENSG00000153147.51562.040002098.82570-0.426207.257006.28370HepG2SAFB2
SMARCA5ENSG00000153147.54460.309003223.607400.468403.218602.49040HepG2SF3A3
SMARCA5ENSG00000153147.53248.796204521.62940-0.476904.010403.17580HepG2SF3B1
SMARCA5ENSG00000153147.52559.102103261.42350-0.349907.923506.82880HepG2SLBP
SMARCA5ENSG00000153147.52825.199802447.635700.206903.225202.53920HepG2SMN1
SMARCA5ENSG00000153147.56696.120105031.055100.412402.027901.36380HepG2SNRNP70
SMARCA5ENSG00000153147.53570.559304054.91400-0.183502.523902.03770HepG2SRFBP1
SMARCA5ENSG00000153147.55031.231202811.484200.8395039.7729038.43790HepG2SRSF1
SMARCA5ENSG00000153147.52004.235403069.64940-0.6150016.2508014.80680HepG2SRSF7
SMARCA5ENSG00000153147.53255.199102527.212700.365105.654804.90300HepG2TAF15
SMARCA5ENSG00000153147.52437.432204451.80950-0.8690017.1710015.62730HepG2TARDBP
SMARCA5ENSG00000153147.51520.853702290.21900-0.5906010.447909.58440HepG2TIAL1
SMARCA5ENSG00000153147.51694.465602310.48830-0.447409.159808.22540HepG2TRIM56
SMARCA5ENSG00000153147.53694.486802667.457600.469803.301902.62080HepG2U2AF1
SMARCA5ENSG00000153147.51609.884702375.09310-0.561003.322302.21840HepG2UPF2
SMARCA5ENSG00000153147.52266.010702760.10730-0.284604.561303.82330HepG2UTP3
SMARCA5ENSG00000153147.51656.468802552.78270-0.624006.512105.41580HepG2XRN2
SMARCA5ENSG00000153147.52669.406802142.504100.317105.999905.07100HepG2ZC3H8
SMARCA5ENSG00000153147.52634.309103144.18600-0.255304.840904.16890HepG2ZNF622
SMARCA5ENSG00000153147.53686.331903010.095300.292302.721701.55040K562AARS
SMARCA5ENSG00000153147.52952.811105476.70270-0.8912041.5989039.44160K562AGGF1
SMARCA5ENSG00000153147.56060.419507255.35000-0.259602.310401.76690K562AQR
SMARCA5ENSG00000153147.53206.636703798.83290-0.244503.300302.24940K562BCLAF1
SMARCA5ENSG00000153147.56073.154307554.68030-0.314905.430503.84060K562CPEB4
SMARCA5ENSG00000153147.54690.865105458.99270-0.218802.028101.34850K562CPSF6
SMARCA5ENSG00000153147.53063.645303727.03980-0.282803.943401.78400K562DDX24
SMARCA5ENSG00000153147.52852.855103517.47700-0.302103.114802.00350K562DDX3X
SMARCA5ENSG00000153147.59407.918707817.110000.267104.946104.11060K562DDX47
SMARCA5ENSG00000153147.52856.282503566.23980-0.320304.468302.67770K562DDX6
SMARCA5ENSG00000153147.54595.775406132.37660-0.416108.438406.75510K562DKC1
SMARCA5ENSG00000153147.53274.978903863.57370-0.238503.305201.97160K562EIF2S1
SMARCA5ENSG00000153147.54641.059805447.71890-0.231202.917002.18210K562EIF2S2
SMARCA5ENSG00000153147.55371.452403684.668700.543705.514703.98540K562EIF3D
SMARCA5ENSG00000153147.52736.079503674.86860-0.425604.948603.84720K562EIF4A3
SMARCA5ENSG00000153147.52378.910203207.76900-0.431306.749804.53560K562EWSR1
SMARCA5ENSG00000153147.55400.909304010.830800.429203.016202.27250K562G3BP2
SMARCA5ENSG00000153147.52646.882503449.72640-0.382203.081301.57180K562GEMIN5
SMARCA5ENSG00000153147.55010.286907260.09590-0.535105.148604.11400K562GRSF1
SMARCA5ENSG00000153147.55392.979204373.446800.302203.319002.14290K562HNRNPA1
SMARCA5ENSG00000153147.52147.797403294.26650-0.6171010.505009.40230K562HNRNPC
SMARCA5ENSG00000153147.55365.095307064.57600-0.397005.266703.75690K562HNRNPL
SMARCA5ENSG00000153147.52964.384704843.12440-0.7082019.5497017.30110K562HNRNPU
SMARCA5ENSG00000153147.55716.158108239.05120-0.527402.915902.09990K562HSPD1
SMARCA5ENSG00000153147.53498.795704879.20300-0.479806.240904.34100K562IGF2BP3
SMARCA5ENSG00000153147.52361.163002936.82070-0.314803.234001.54710K562LSM11
SMARCA5ENSG00000153147.54125.891605042.00870-0.289302.881502.02280K562MAGOH
SMARCA5ENSG00000153147.53833.633705087.52790-0.408305.188303.96660K562METAP2
SMARCA5ENSG00000153147.54643.540805392.51980-0.215703.437702.54090K562MTPAP
SMARCA5ENSG00000153147.52878.240703669.61350-0.350404.486902.90580K562NCBP2
SMARCA5ENSG00000153147.55142.833405991.58090-0.220405.611904.60530K562NSUN2
SMARCA5ENSG00000153147.52384.528203243.10200-0.443703.702701.96190K562NUSAP1
SMARCA5ENSG00000153147.54058.781406437.55270-0.665503.318302.20590K562PABPN1
SMARCA5ENSG00000153147.55599.389304486.310400.319603.273702.20780K562PCBP2
SMARCA5ENSG00000153147.55929.319404393.150000.432504.030703.02600K562PCBP3
SMARCA5ENSG00000153147.52423.163703216.01760-0.408404.315602.47380K562PHF6
SMARCA5ENSG00000153147.54801.339203369.696600.510709.133007.71080K562POLR2G
SMARCA5ENSG00000153147.54722.008906897.30620-0.546603.122902.24400K562PPIG
SMARCA5ENSG00000153147.54049.453907655.77880-0.918805.047002.89410K562PPP1R8
SMARCA5ENSG00000153147.54550.853103348.420400.442605.090404.07490K562PRPF8
SMARCA5ENSG00000153147.51679.415202953.57930-0.8145015.3749012.89520K562PSIP1
SMARCA5ENSG00000153147.511579.935709713.057800.253502.090801.38110K562PUF60
SMARCA5ENSG00000153147.58301.0092010122.69950-0.286204.583103.33860K562PUM2
SMARCA5ENSG00000153147.54821.195105506.63790-0.191801.984801.46750K562RBM15
SMARCA5ENSG00000153147.52609.756403805.88080-0.544308.434405.96100K562RBM25
SMARCA5ENSG00000153147.54941.166807920.23190-0.680703.052701.41590K562RBM39
SMARCA5ENSG00000153147.52050.292702694.39360-0.394104.782903.47650K562RCC2
SMARCA5ENSG00000153147.53255.395304074.46540-0.323803.350401.47000K562RECQL
SMARCA5ENSG00000153147.53381.080005888.62150-0.800403.480802.08930K562SF1
SMARCA5ENSG00000153147.55145.206305912.15070-0.200502.356301.59820K562SF3A3
SMARCA5ENSG00000153147.53112.168804172.06270-0.422806.327204.99990K562SF3B4
SMARCA5ENSG00000153147.51668.633402554.25090-0.614208.740106.61150K562SRFBP1
SMARCA5ENSG00000153147.55627.497004802.114000.228702.230401.58730K562SRSF1
SMARCA5ENSG00000153147.53485.452904534.97450-0.379703.923402.63490K562SRSF5
SMARCA5ENSG00000153147.53971.597603379.892400.232602.311501.56060K562SYNCRIP
SMARCA5ENSG00000153147.53379.782904860.27940-0.524106.410405.29300K562TARDBP
SMARCA5ENSG00000153147.53768.995304688.22880-0.314903.605102.65180K562TIA1
SMARCA5ENSG00000153147.52272.695702840.89350-0.321902.336101.48120K562TIAL1
SMARCA5ENSG00000153147.53444.728704600.01000-0.417204.779403.27320K562TRA2A
SMARCA5ENSG00000153147.51939.314203017.67490-0.637909.662707.61930K562TRIM56
SMARCA5ENSG00000153147.53550.897206352.99970-0.8393041.8998039.52960K562UPF1
SMARCA5ENSG00000153147.56440.839108173.20370-0.343703.750002.71680K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SMARCA5 is not available on ENCORE database.





4 RBPs can affect the splicing of SMARCA5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESMARCA5ENSG00000153147.5chr4+144438507144438631144434615144435254144442581144442748-0.069000.003720.03651excludedK562AQR
SESMARCA5ENSG00000153147.5chr4+144467062144467200144466622144466736144467928144468061-0.055000.000010.00023excludedK562AQR
SESMARCA5ENSG00000153147.5chr4+144461515144461648144459938144460091144464661144464784-0.079000.000000.00000excludedK562AQR
SESMARCA5ENSG00000153147.5chr4+144461515144461648144459938144460091144464661144464810-0.062000.000020.00067excludedK562PUS1
SESMARCA5ENSG00000153147.5chr4+144467077144467200144466622144466736144467928144468061-0.108000.000000.00000excludedK562U2AF2
A3SSSMARCA5ENSG00000153147.5chr4+1444658581444660001444658891444660001444649321444651250.054000.000000.00000longerK562AQR
A3SSSMARCA5ENSG00000153147.5chr4+1444454951444456201444455191444456201444425331444427480.092000.000000.00000longerK562AQR
A3SSSMARCA5ENSG00000153147.5chr4+1444670621444672001444670771444672001444666221444667360.056000.000000.00000longerK562AQR
MXESMARCA5ENSG00000153147.5chr4+1444670771444672001444679281444680611444666221444667361444685371444686560.077000.000000.000001includedHepG2U2AF2
MXESMARCA5ENSG00000153147.5chr4+1444474331444476131444490201444491761444466031444467041444497351444498670.125000.007420.079911includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SMARCA5 is not avaliable on ENCORE database.