PIR

General Information

Gene Name : PIR
Gene ID : ENSG00000087842.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PIR)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PIR	ENSG00000087842.10	4.16	4.94	4.55	ENCSR000AEF
HepG2	PIR	ENSG00000087842.10	19.45	30.83	25.14	ENCSR985KAT
K562	PIR	ENSG00000087842.10	7.92	7.75	7.83	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PIR is not avaliable on ENCORE database.

Proteins bound to RNA

PIR RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for PIR is not avaliable on ENCORE database.

1 proteins are bound to PIR RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	15415619	15415653	-	CDS,intron-Distal	4.11725	3.98636	K562	LIN28B
chrX	15425627	15425672	-	CDS,intron-Distal,intron-Proximal	4.05251	3.30425	K562	LIN28B
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 2 of 2 entries

eCLIP assay for PIR is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for PIR is not available on ENCORE database.
97 RBPs can affect the levels of PIR.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PIR is not available on ENCORE database.

97 RBPs can affect the gene expression of PIR :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PIR	ENSG00000087842.6	581.72860	239.54840	1.27990	25.45700	24.21930	HepG2	ZNF622
PIR	ENSG00000087842.6	77.04560	281.47000	-1.86920	19.17430	17.32790	K562	SRSF1
PIR	ENSG00000087842.6	431.80740	156.55080	1.46370	14.12270	11.91940	HepG2	SMNDC1
PIR	ENSG00000087842.6	49.14540	197.15930	-2.00420	12.76340	11.27770	HepG2	RRP9
PIR	ENSG00000087842.6	583.25740	330.40780	0.81980	10.81290	9.78420	K562	AGGF1
PIR	ENSG00000087842.6	81.74020	264.68340	-1.69510	10.96340	9.76000	HepG2	RPLP0
PIR	ENSG00000087842.6	484.33800	246.34070	0.97530	10.74880	8.54770	K562	HNRNPL
PIR	ENSG00000087842.6	95.08560	258.32140	-1.44190	9.25750	7.93940	HepG2	DDX55
PIR	ENSG00000087842.6	407.73010	197.12660	1.04840	8.73210	7.42000	HepG2	CIRBP
PIR	ENSG00000087842.6	105.85980	222.41350	-1.07110	8.07010	6.83940	HepG2	PRPF4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 112 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PIR

General Information

Functions

Localization

Domains (AlphaFold: PIR)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PIR is not avaliable on ENCORE database.

1 proteins are bound to PIR RNA:

eCLIP assay for PIR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PIR is not available on ENCORE database.

97 RBPs can affect the gene expression of PIR :

The Knockdown/knockout RNA-Seq assay for PIR is not available on ENCORE database.

No RBPs affect the alternative splcing events of PIR on ENCORE database.

The Knockdown/knockout RNA-Seq assay for PIR is not avaliable on ENCORE database.