PIGS

General Information

Gene Name       : PIGS
Gene ID             : ENSG00000087111.20
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PIGS)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PIGSENSG00000087111.2039.1648.0543.60ENCSR000AEF
HepG2PIGSENSG00000087111.2060.1045.9153.00ENCSR985KAT
K562PIGSENSG00000087111.2099.8292.6196.22ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PIGS is not avaliable on ENCORE database.



Proteins bound to RNA
  • PIGS RNA is bound by 23 proteins.  







eCLIP assay for PIGS is not avaliable on ENCORE database.





23 proteins are bound to PIGS RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr172688101526881067-3'-UTR,intron-Distal3.447797.49421K562IGF2BP1
chr172688100226881068-3'-UTR,intron-Distal4.601727.70131HepG2PCBP2
chr172688079926880861-3'-UTR,intron-Distal,intron-Proximal4.6025710.80373K562IGF2BP2
chr172688845426888541-3'-UTR,CDS,intron-Distal4.086343.48187K562RBM15
chr172688182526881870-3'-UTR,CDS,intron-Distal,intron-Proximal4.846024.86944K562AQR
chr172688094926881071-3'-UTR,intron-Distal3.914753.73561HepG2IGF2BP3
chr172688067526880755-3'-UTR,intron-Distal,intron-Proximal3.5520642.14639K562EIF4G2
chr172688074026880800-3'-UTR,intron-Distal,intron-Proximal4.011998.08956HepG2PCBP2
chr172688070126880851-3'-UTR,intron-Distal,intron-Proximal3.864023.97134HepG2IGF2BP3
chr172688843926888570-3'-UTR,CDS,intron-Distal,intron-Proximal3.733137.70991K562SND1
chr172688062026880675-3'-UTR,intron-Distal4.8555437.39841K562EIF4G2
chr172688054626880595-3'-UTR,intron-Distal3.808419.69901K562UPF1
chr172688064326880745-3'-UTR,intron-Distal,intron-Proximal3.328238.79358HepG2IGF2BP1
chr172688109326881128-3'-UTR,intron-Distal4.104403.98311K562IGF2BP1
chr172688043226880539-3'-UTR,intron-Distal3.640996.89681K562PABPC4
chr172688093226880978-3'-UTR,intron-Distal3.583775.65632K562UPF1
chr172688318226883285-3'-UTR,CDS,intron-Distal,intron-Proximal3.289374.22960K562SND1
chr172688844226888594-3'-UTR,CDS,intron-Distal3.613236.45270K562METAP2
chr172688386426883958-3'-UTR,CDS,intron-Distal,intron-Proximal4.711194.00197K562METAP2
chr172688060026880694-3'-UTR,intron-Distal3.1485315.39513K562IGF2BP1
chr172688114926881208-3'-UTR,intron-Distal4.308923.47885K562LIN28B
chr172688387826883953-3'-UTR,CDS,intron-Distal,intron-Proximal3.648919.51734K562YBX3
chr172688056426880595-3'-UTR,intron-Distal3.741415.73001K562TARDBP
chr172688318726883285-3'-UTR,CDS,intron-Distal,intron-Proximal3.203433.48584HepG2SND1
chr172688054526880599-3'-UTR,intron-Distal3.421744.36276HepG2LARP4
chr172688086126880895-3'-UTR,intron-Distal4.027284.25090K562IGF2BP2
chr172688716526887230-3'-UTR,CDS,intron-Distal,intron-Proximal4.166684.23351K562BUD13
chr172688844126888509-3'-UTR,CDS,intron-Distal3.011556.64273K562YBX3
chr172688384426883882-3'-UTR,CDS,intron-Distal,intron-Proximal3.878973.02572K562SND1
chr172689083326890902-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.594753.98500HepG2SND1
chr172688068326880754-3'-UTR,intron-Distal,intron-Proximal3.497244.81659HepG2UPF1
chr172688063426880705-3'-UTR,intron-Distal3.441514.23202K562SRSF7
chr172688062726880683-3'-UTR,intron-Distal4.587534.20997HepG2UPF1
chr172688060426880688-3'-UTR,intron-Distal6.1951974.91482K562TARDBP
chr172688190026881985-3'-UTR,CDS,intron-Distal3.960153.31432HepG2SND1
chr172688059526880690-3'-UTR,intron-Distal4.1114629.13283K562UPF1
chr172688850926888556-3'-UTR,CDS,intron-Distal3.6826911.37584K562YBX3
chr172688201826882076-3'-UTR,CDS,intron-Distal3.932433.02572K562SND1
chr172689083526890856-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.276854.49055K562YBX3
chr172689083126890916-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.657454.08796K562SND1
chr172689046226890482-3'-UTR,5'-UTR,CDS,intron-Distal3.495445.15749K562YBX3
chr172688198426882068-3'-UTR,CDS,intron-Distal3.881683.15006K562RBM15
chr172688843826888592-3'-UTR,CDS,intron-Distal,intron-Proximal3.405274.50521HepG2SND1
chr172688714226887200-3'-UTR,CDS,intron-Distal3.403973.61371K562SND1
chr172688099626881036-3'-UTR,intron-Distal3.277365.92676K562EIF4G2
chr172688098126881050-3'-UTR,intron-Distal3.841586.10061HepG2IGF2BP1
chr172689834826898415-5'-UTR,intron-Distal5.126136.04760K562AQR
chr172689835126898472-5'-UTR,intron-Distal4.602614.84986K562GTF2F1
chr172689794826897982-5'-UTR,CDS,intron-Distal,intron-Proximal4.786978.17272HepG2DDX3X
chr172689847526898545-5'-UTR,CDS,intron-Distal,intron-Proximal4.256355.63105K562DDX3X
chr172689846826898529-5'-UTR,CDS,intron-Distal,intron-Proximal5.0012710.30616HepG2DDX3X
chr172689790326898073-5'-UTR,CDS,intron-Distal,intron-Proximal4.293699.26247K562BUD13
chr172689817526898210-CDS,intron-Distal,intron-Proximal4.653708.20930HepG2DDX3X
chr172689810326898209-CDS,intron-Distal,intron-Proximal3.448998.23377K562DDX3X
chr172689810026898175-CDS,intron-Distal4.3336223.82117HepG2DDX3X
chr172689806626898093-CDS,intron-Distal,intron-Proximal4.031495.66448HepG2DDX3X
chr172689801926898052-CDS,intron-Distal,intron-Proximal6.227209.64650K562RPS3
chr172688684526886949-intron-Distal3.455234.17049K562TARDBP
chr172688884026888938-intron-Distal,intron-Proximal3.211364.18806HepG2U2AF2
chr172688894426889015-intron-Distal3.132925.17040K562KHSRP
chr172688901526889093-intron-Distal3.355626.57673K562KHSRP
chr172689772926897814-intron-Distal,intron-Proximal4.591954.53454K562PRPF8
chr172688923326889340-intron-Distal3.450016.18396K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PIGS is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PIGS is not available on ENCORE database.

  • 109 RBPs can affect the levels of PIGS.  








The Knockdown/knockout RNA-Seq assay for PIGS is not available on ENCORE database.





109 RBPs can affect the gene expression of PIGS :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PIGSENSG00000087111.16664.132401145.09060-0.7859010.404008.51220HepG2AATF
PIGSENSG00000087111.161443.042001914.73300-0.408003.120302.11750HepG2ABCF1
PIGSENSG00000087111.161864.567801426.814000.385906.730205.86620HepG2ACO1
PIGSENSG00000087111.163383.619302135.545900.663906.963706.16190HepG2AKAP1
PIGSENSG00000087111.162589.172001971.182200.393307.141006.12140HepG2AUH
PIGSENSG00000087111.162062.153501063.207600.9556018.0586016.72730HepG2BOP1
PIGSENSG00000087111.162824.107901950.010700.534203.773702.62150HepG2CCAR1
PIGSENSG00000087111.161135.960901426.44870-0.328504.736903.91100HepG2CKAP4
PIGSENSG00000087111.162224.045701481.938100.585603.633102.75140HepG2CNOT7
PIGSENSG00000087111.161415.88590976.083700.536505.380004.45090HepG2CPSF6
PIGSENSG00000087111.161135.383301353.34980-0.253402.215301.30690HepG2YBX3
PIGSENSG00000087111.162277.088501767.664200.365205.565204.71320HepG2CELF1
PIGSENSG00000087111.162298.352601900.555200.274104.599903.68140HepG2DAZAP1
PIGSENSG00000087111.16906.082101319.57310-0.5424010.746309.31620HepG2DDX19B
PIGSENSG00000087111.161691.106001355.227100.319303.591702.27370HepG2DDX1
PIGSENSG00000087111.161648.574701262.833800.384503.530702.77210HepG2DDX21
PIGSENSG00000087111.16809.758501161.66640-0.520604.196602.65080HepG2DDX27
PIGSENSG00000087111.163752.795502045.500300.8754013.6248012.34040HepG2DDX3X
PIGSENSG00000087111.16700.189301757.57710-1.3278021.5590020.05280HepG2DDX6
PIGSENSG00000087111.161162.258301365.06010-0.232002.194101.57950HepG2DKC1
PIGSENSG00000087111.161813.768801328.872600.448706.882805.81390HepG2DNAJC21
PIGSENSG00000087111.162516.202401689.154800.574806.114705.25230HepG2EIF2S1
PIGSENSG00000087111.161056.255101452.31420-0.459405.214303.63920HepG2EIF2S2
PIGSENSG00000087111.161591.987201875.11580-0.236202.550901.74130HepG2EIF4G1
PIGSENSG00000087111.161209.164202263.21760-0.9044029.3215027.71830HepG2ETF1
PIGSENSG00000087111.161109.112501394.20320-0.330002.848202.00110HepG2EWSR1
PIGSENSG00000087111.162923.707201933.372100.596606.042504.94780HepG2FIP1L1
PIGSENSG00000087111.16553.214501033.47000-0.9016010.746008.56300HepG2FKBP4
PIGSENSG00000087111.16793.379801384.24250-0.803002.860102.06080HepG2FUBP3
PIGSENSG00000087111.162517.417301416.068400.830007.967806.17060HepG2FUS
PIGSENSG00000087111.162583.909501747.224200.564405.507704.58200HepG2G3BP1
PIGSENSG00000087111.161645.960501244.150000.403702.987801.92840HepG2GNB2L1
PIGSENSG00000087111.161858.757701492.293700.316702.579001.90750HepG2HNRNPC
PIGSENSG00000087111.162008.788001731.224600.214402.990502.29280HepG2HNRNPL
PIGSENSG00000087111.161801.957901055.924700.771008.994007.93060HepG2HNRNPLL
PIGSENSG00000087111.16964.767401333.80880-0.467305.180903.92400HepG2HNRNPM
PIGSENSG00000087111.16927.771101482.42700-0.6761015.1979013.86850HepG2HNRNPU
PIGSENSG00000087111.161104.036501514.24880-0.455808.884607.64330HepG2ILF2
PIGSENSG00000087111.161545.795401304.252500.245003.083402.00900HepG2KIF1C
PIGSENSG00000087111.161478.776201884.53330-0.349802.447401.82960HepG2MAGOH
PIGSENSG00000087111.161378.978101894.97450-0.458603.522502.81850HepG2MATR3
PIGSENSG00000087111.161927.874301564.530500.301202.486501.71780HepG2MSI2
PIGSENSG00000087111.161638.483901313.793400.318502.638201.45150HepG2NAA15
PIGSENSG00000087111.163067.750501939.525300.661407.612606.58690HepG2NCBP2
PIGSENSG00000087111.162254.287301884.593000.258302.678501.92760HepG2NOL12
PIGSENSG00000087111.162589.151801726.876500.584206.179205.11240HepG2PABPC4
PIGSENSG00000087111.161179.202601467.33950-0.315403.766202.79530HepG2PARN
PIGSENSG00000087111.161493.512301891.69130-0.341004.969704.19300HepG2PCBP1
PIGSENSG00000087111.16807.169401340.43010-0.731805.497204.07190HepG2PCBP2
PIGSENSG00000087111.16948.111901387.48190-0.549309.267307.97140HepG2PRPF4
PIGSENSG00000087111.16935.984701924.86290-1.0402035.2893033.77880HepG2PTBP1
PIGSENSG00000087111.162243.371701909.800100.232103.720903.05500HepG2PUM1
PIGSENSG00000087111.162394.438501908.381400.327203.801603.02010HepG2PUM2
PIGSENSG00000087111.16890.090901453.29450-0.7073017.0857015.78710HepG2PUS1
PIGSENSG00000087111.16948.988501293.29090-0.446601.951801.34970HepG2RAVER1
PIGSENSG00000087111.162160.852301797.148400.265802.474401.65930HepG2RBM15
PIGSENSG00000087111.161311.665801891.62350-0.528209.161708.34360HepG2RBM22
PIGSENSG00000087111.161671.774702142.19070-0.357704.880404.19780HepG2NELFE
PIGSENSG00000087111.161720.281101995.15380-0.213902.291001.72390HepG2RECQL
PIGSENSG00000087111.161186.351001769.64780-0.576907.452506.41270HepG2RPLP0
PIGSENSG00000087111.161105.432401320.16230-0.256102.844102.19310HepG2SAFB2
PIGSENSG00000087111.161294.76380997.100900.376802.853601.89910HepG2SERBP1
PIGSENSG00000087111.162893.996701572.670000.879709.634008.31830HepG2SF3A3
PIGSENSG00000087111.16594.880801045.15880-0.813009.873908.61450HepG2SF3B1
PIGSENSG00000087111.161467.492702004.03750-0.449608.054907.12800HepG2SF3B4
PIGSENSG00000087111.16944.708801320.03640-0.482602.967001.97280HepG2SMNDC1
PIGSENSG00000087111.161988.516901162.921800.773806.222705.04400HepG2SNRNP70
PIGSENSG00000087111.16938.056602136.50560-1.1875051.3498049.90270HepG2SRFBP1
PIGSENSG00000087111.161376.696202091.77850-0.6035014.2939013.39860HepG2SRSF1
PIGSENSG00000087111.162183.785901776.337100.297804.352703.59920HepG2SRSF5
PIGSENSG00000087111.16903.009401854.96900-1.0386036.3761035.00740HepG2SSB
PIGSENSG00000087111.16979.795901236.01440-0.335102.379101.74560HepG2SUPV3L1
PIGSENSG00000087111.162581.131301880.164400.457007.894907.02590HepG2TAF15
PIGSENSG00000087111.161927.344001029.190700.9050015.4278013.94640HepG2TARDBP
PIGSENSG00000087111.16825.641101440.42660-0.8029014.9382013.94080HepG2TIAL1
PIGSENSG00000087111.162131.759401757.649600.278302.575401.73450HepG2TUFM
PIGSENSG00000087111.161289.447001653.75210-0.359002.829102.19410HepG2U2AF1
PIGSENSG00000087111.161828.968501047.919300.803402.225201.35100HepG2U2AF2
PIGSENSG00000087111.161360.725501860.48540-0.451303.321002.40510HepG2UBE2L3
PIGSENSG00000087111.162019.797901394.715100.5341012.0229010.75240HepG2UPF1
PIGSENSG00000087111.161714.281801346.546800.348205.150204.37570HepG2UTP3
PIGSENSG00000087111.16776.082301369.26240-0.8191015.3372013.96280HepG2ZC3H8
PIGSENSG00000087111.163358.807701533.923501.1306071.9190070.11310HepG2ZNF622
PIGSENSG00000087111.162742.843503847.30700-0.488205.834704.05390K562ABCF1
PIGSENSG00000087111.165514.777704032.040700.451705.870804.89650K562AKAP8L
PIGSENSG00000087111.162916.236303957.92230-0.440604.861804.12350K562AQR
PIGSENSG00000087111.162077.597402411.90120-0.215302.467101.56380K562BCLAF1
PIGSENSG00000087111.161718.274902145.30910-0.320203.174202.33300K562CPSF6
PIGSENSG00000087111.164743.659606292.93930-0.407706.467904.99140K562CELF1
PIGSENSG00000087111.162704.941802245.128400.268702.266501.32970K562DDX3X
PIGSENSG00000087111.162627.406004226.47980-0.6858022.7930021.11130K562DDX47
PIGSENSG00000087111.161461.014302276.27360-0.6397013.5324010.54920K562DDX6
PIGSENSG00000087111.161783.684502358.75370-0.403203.864602.25960K562DNAJC21
PIGSENSG00000087111.161879.677002332.64590-0.311502.601301.71940K562EFTUD2
PIGSENSG00000087111.162501.220102989.08600-0.257103.229602.46250K562EIF2S2
PIGSENSG00000087111.161422.891702231.16800-0.649004.412403.11410K562EIF3A
PIGSENSG00000087111.163639.243105118.07230-0.4920011.219609.38730K562EIF4G2
PIGSENSG00000087111.163561.458202765.658500.364703.657302.67230K562FIP1L1
PIGSENSG00000087111.161889.382102428.29290-0.362002.784801.65580K562FKBP4
PIGSENSG00000087111.161597.958202182.88520-0.450004.497703.40480K562FMR1
PIGSENSG00000087111.161316.557101850.22860-0.490904.413703.23530K562FTO
PIGSENSG00000087111.16859.633301695.61250-0.980009.003507.57740K562G3BP2
PIGSENSG00000087111.161748.411102338.67760-0.419603.726102.03440K562GEMIN5
PIGSENSG00000087111.162740.232703306.00910-0.270803.243602.00450K562GLRX3
PIGSENSG00000087111.163398.230003983.03500-0.229102.115501.44890K562GRSF1
PIGSENSG00000087111.162494.484003521.04360-0.497304.641603.26190K562HNRNPA1
PIGSENSG00000087111.161931.935102796.61540-0.533607.860606.90330K562HNRNPC
PIGSENSG00000087111.161748.935702357.71830-0.430903.249101.89900K562HNRNPK
PIGSENSG00000087111.162621.074703899.57900-0.573206.263404.90890K562HNRNPU
PIGSENSG00000087111.163047.674002362.515800.367302.539501.57050K562IGF2BP2
PIGSENSG00000087111.161249.329401749.00490-0.485403.363802.32360K562KRR1
PIGSENSG00000087111.161541.225901999.29370-0.375403.710102.68610K562METAP2
PIGSENSG00000087111.162732.291103475.84540-0.347306.925405.69310K562MTPAP
PIGSENSG00000087111.163234.751703861.93190-0.255705.973204.93550K562NSUN2
PIGSENSG00000087111.161594.348502207.54770-0.469503.671002.54600K562PCBP2
PIGSENSG00000087111.161726.243502269.94390-0.395003.702802.83450K562PRPF8
PIGSENSG00000087111.161443.746502410.94180-0.739806.560205.57190K562PTBP1
PIGSENSG00000087111.163361.501805584.21800-0.7322013.1245011.33090K562PUF60
PIGSENSG00000087111.164701.105205939.58730-0.337404.386103.01670K562PUM1
PIGSENSG00000087111.164683.540505819.72650-0.313404.953203.65670K562PUM2
PIGSENSG00000087111.162462.328503998.73710-0.6995010.046609.05790K562PUS1
PIGSENSG00000087111.165510.573503896.117900.500109.521408.44500K562RBM15
PIGSENSG00000087111.163052.634302287.877700.415905.595104.17970K562RCC2
PIGSENSG00000087111.161471.053802311.88360-0.652207.086705.76320K562RPS19
PIGSENSG00000087111.163147.847003810.80740-0.275703.987403.01730K562SF3A3
PIGSENSG00000087111.161080.874901948.04460-0.8498010.685108.69750K562SF3B1
PIGSENSG00000087111.161449.235201762.22690-0.282102.414301.61810K562SF3B4
PIGSENSG00000087111.161900.429802415.93050-0.346302.929001.62780K562SLBP
PIGSENSG00000087111.161150.321901696.75700-0.560706.645705.40760K562U2AF2
PIGSENSG00000087111.162518.417503211.33660-0.350702.510401.37040K562UTP3
PIGSENSG00000087111.162812.511703643.65140-0.373508.622307.21080K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PIGS is not available on ENCORE database.





4 RBPs can affect the splicing of PIGS :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPIGSENSG00000087111.16chr17-2688876126888931268884392688864726890448268906100.057000.000000.00000includedK562AQR
SEPIGSENSG00000087111.16chr17-268884392688864726887066268872092689044826890540-0.092000.000000.00004excludedK562AQR
SEPIGSENSG00000087111.16chr17-268884392688864726887066268872092689044826890540-0.070000.000290.02871excludedK562SUPV3L1
SEPIGSENSG00000087111.16chr17-268884392688864726887066268872092689044826890540-0.189000.000000.00000excludedK562HNRNPC
A3SSPIGSENSG00000087111.16chr17-2688379726884026268837972688399026885493268856520.056000.000000.00000longerK562AQR
A3SSPIGSENSG00000087111.16chr17-2688318326883390268831832688328426883844268839900.055000.000060.00056longerK562AQR
RIPIGSENSG00000087111.16chr17-268978692689820626897869268979812689806626898206-0.052000.000070.01307excludedK562ZC3H8
RIPIGSENSG00000087111.16chr17-2689786926898206268978692689798126898066268982060.188000.000000.00000includedK562AQR
MXEPIGSENSG00000087111.16chr17-26888439268886472689044826890610268870662688720926890835268909250.110000.000000.000021includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PIGS is not avaliable on ENCORE database.