NGFRAP1

General Information

Gene Name : NGFRAP1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NGFRAP1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NGFRAP1 is not avaliable on ENCORE database.

Proteins bound to RNA

NGFRAP1 RNA is bound by 7 proteins.

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eCLIP assay for NGFRAP1 is not avaliable on ENCORE database.

7 proteins are bound to NGFRAP1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	102632769	102632908	+	3'-UTR	5.34323	38.17135	HepG2	LARP4
chrX	102632857	102632889	+	3'-UTR	6.29765	26.00513	HepG2	DDX55
chrX	102632804	102632857	+	3'-UTR	5.66035	23.94243	HepG2	DDX55
chrX	102632466	102632544	+	CDS	4.06711	7.27605	HepG2	GRWD1
chrX	102632889	102632903	+	3'-UTR	5.67822	6.52715	HepG2	DDX55
chrX	102631470	102631542	+	5'-UTR,intron-Proximal	5.14368	5.35746	HepG2	DDX3X
chrX	102631960	102632016	+	5'-UTR,intron-Distal	4.19023	4.82666	HepG2	DDX3X
chrX	102632385	102632477	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.41724	4.27476	HepG2	AQR
chrX	102632419	102632490	+	3'-UTR,CDS,intron-Proximal	4.52688	3.71570	HepG2	BCLAF1
chrX	102632809	102632912	+	3'-UTR	3.95600	3.19379	HepG2	AKAP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 10 entries

eCLIP assay for NGFRAP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NGFRAP1 is not available on ENCORE database.
94 RBPs can affect the levels of NGFRAP1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NGFRAP1 is not available on ENCORE database.

94 RBPs can affect the gene expression of NGFRAP1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NGFRAP1	ENSG00000166681.9	200.39520	680.38100	-1.76350	35.91720	34.08690	HepG2	QKI
NGFRAP1	ENSG00000166681.9	1239.93630	299.47110	2.04970	29.11610	26.74030	HepG2	CNOT7
NGFRAP1	ENSG00000166681.9	1371.72410	682.69690	1.00660	26.87350	25.73130	HepG2	SRSF1
NGFRAP1	ENSG00000166681.9	1384.91130	699.15000	0.98600	24.36700	23.08000	HepG2	NELFE
NGFRAP1	ENSG00000166681.9	1004.35330	523.60090	0.93960	22.34260	20.76480	HepG2	ZC3H8
NGFRAP1	ENSG00000166681.9	1752.33350	679.39020	1.36690	22.33710	20.75160	HepG2	SUPV3L1
NGFRAP1	ENSG00000166681.9	977.37340	531.65880	0.87830	20.74950	18.97430	HepG2	DDX19B
NGFRAP1	ENSG00000166681.9	1827.35240	745.81610	1.29280	20.15730	18.85820	HepG2	AKAP1
NGFRAP1	ENSG00000166681.9	1138.16710	628.22030	0.85730	18.11940	16.95110	HepG2	PTBP1
NGFRAP1	ENSG00000166681.9	252.29430	615.13390	-1.28580	17.82700	15.98910	HepG2	MSI2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 94 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NGFRAP1 is not available on ENCORE database.

8 RBPs can affect the splicing of NGFRAP1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NGFRAP1	ENSG00000166681.9	chrX	+	102631955	102632034	102631267	102631541	102632437	102633005	-0.09900	0.00000	0.00005	excluded	HepG2	SRSF7
A3SS	NGFRAP1	ENSG00000166681.9	chrX	+	102632390	102633005	102632437	102633005	102631955	102632034	-0.10900	0.00000	0.00294	shorter	HepG2	HNRNPL
A3SS	NGFRAP1	ENSG00000166681.9	chrX	+	102632390	102633005	102632437	102633005	102631955	102632034	-0.15000	0.00001	0.00406	shorter	HepG2	SFPQ
A3SS	NGFRAP1	ENSG00000166681.9	chrX	+	102632390	102633005	102632437	102633005	102631955	102632034	0.15700	0.00004	0.00596	longer	HepG2	SF3B4
SE	NGFRAP1	ENSG00000166681.9	chrX	+	102631955	102632034	102631267	102631541	102632390	102633005	0.06300	0.00013	0.00886	included	HepG2	HNRNPU
SE	NGFRAP1	ENSG00000166681.9	chrX	+	102631955	102632034	102631267	102631541	102632437	102633005	0.10300	0.00029	0.06310	included	HepG2	ILF3
SE	NGFRAP1	ENSG00000166681.9	chrX	+	102631955	102632189	102631322	102631541	102632437	102633005	0.14800	0.00107	0.07087	included	HepG2	TIAL1
SE	NGFRAP1	ENSG00000166681.9	chrX	+	102631955	102632034	102631267	102631541	102632437	102633005	-0.06000	0.00275	0.05607	excluded	HepG2	SRSF1

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NGFRAP1

General Information

Functions

Localization

Domains (AlphaFold: NGFRAP1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NGFRAP1 is not avaliable on ENCORE database.

7 proteins are bound to NGFRAP1 RNA:

eCLIP assay for NGFRAP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NGFRAP1 is not available on ENCORE database.

94 RBPs can affect the gene expression of NGFRAP1 :

The Knockdown/knockout RNA-Seq assay for NGFRAP1 is not available on ENCORE database.

8 RBPs can affect the splicing of NGFRAP1 :

The Knockdown/knockout RNA-Seq assay for NGFRAP1 is not avaliable on ENCORE database.