MEF2A

General Information

Gene Name       : MEF2A
Gene ID             : ENSG00000068305.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MEF2A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MEF2AENSG00000068305.1731.2626.5028.88ENCSR000AEF
HepG2MEF2AENSG00000068305.177.8910.459.17ENCSR985KAT
K562MEF2AENSG00000068305.176.545.856.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MEF2A is not avaliable on ENCORE database.



Proteins bound to RNA
  • MEF2A RNA is bound by 20 proteins.  







eCLIP assay for MEF2A is not avaliable on ENCORE database.





20 proteins are bound to MEF2A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr15100254239100254364+3'-UTR,intron-Distal5.551287.96851HepG2FUBP3
chr15100254087100254171+3'-UTR,intron-Distal4.758805.08199HepG2FUBP3
chr15100173288100173388+3'-UTR,5'-UTR,CDS,intron-Proximal3.310873.43213K562UCHL5
chr15100173276100173382+3'-UTR,5'-UTR,CDS,intron-Proximal3.259216.91872HepG2BCLAF1
chr15100106619100106704+5'-UTR,intron-Distal4.3971110.59961HepG2CSTF2T
chr15100106628100106712+5'-UTR,intron-Distal5.6407914.64201K562CSTF2T
chr15100106613100106772+5'-UTR,intron-Distal4.7201920.28186HepG2FAM120A
chr15100106617100106741+5'-UTR,intron-Distal5.4216412.10569HepG2PRPF4
chr15100106712100106807+5'-UTR,intron-Distal,intron-Proximal4.767565.01722K562CSTF2T
chr15100106632100106698+5'-UTR,intron-Distal4.386923.85108HepG2GTF2F1
chr15100106716100106772+5'-UTR,intron-Distal3.458206.96229HepG2CSTF2T
chr15100106613100106703+5'-UTR,intron-Distal5.502608.23441K562GTF2F1
chr15100106653100106711+5'-UTR,intron-Distal3.263614.23616K562TIA1
chr15100211525100211627+CDS,intron-Distal,intron-Proximal4.346596.65960HepG2BCLAF1
chr15100215632100215669+CDS,intron-Proximal4.752895.27053HepG2PPIG
chr15100214587100214680+CDS,intron-Proximal4.121494.11564K562U2AF2
chr15100185889100185973+CDS,intron-Distal,intron-Proximal4.3953610.57092HepG2BCLAF1
chr15100215603100215668+CDS,intron-Proximal3.526885.97823HepG2BCLAF1
chr15100214581100214656+CDS,intron-Proximal5.224997.27507HepG2U2AF2
chr15100211704100211774+CDS,intron-Distal,intron-Proximal5.363378.22784HepG2U2AF2
chr15100211818100211889+CDS,intron-Distal,intron-Proximal4.791074.78529HepG2BCLAF1
chr15100185910100185993+CDS,intron-Distal,intron-Proximal3.122533.00343HepG2GRWD1
chr15100185782100185889+CDS,intron-Distal3.600669.83905HepG2BCLAF1
chr15100236445100236501+intron-Distal3.514306.71344HepG2HNRNPL
chr15100113698100113798+intron-Distal4.088733.86809HepG2SUGP2
chr15100217378100217436+intron-Distal4.371716.03318HepG2CSTF2
chr15100113842100113963+intron-Distal4.0155610.53796HepG2QKI
chr15100106826100106894+intron-Distal,intron-Proximal4.147828.19675HepG2CSTF2T
chr15100106539100106601+intron-Distal5.732437.81647HepG2FAM120A
chr15100185983100186082+intron-Distal,intron-Proximal4.668285.85485K562KHSRP
chr15100106400100106458+intron-Distal,intron-Proximal5.4698911.27170HepG2CSTF2T
chr15100106403100106458+intron-Distal,intron-Proximal4.115488.46178K562CSTF2T
chr15100173043100173125+intron-Distal,intron-Proximal4.191583.50357HepG2QKI
chr15100113777100113836+intron-Distal3.745035.08047HepG2QKI
chr15100106948100107004+intron-Distal3.029603.25653K562CSTF2T
chr15100236502100236530+intron-Distal4.8589610.88845HepG2HNRNPL
chr15100106832100106885+intron-Distal,intron-Proximal4.126264.10323HepG2PRPF4
chr15100106596100106688+intron-Distal5.272935.19464K562DROSHA
chr15100106401100106458+intron-Distal,intron-Proximal5.176036.43928K562GTF2F1
chr15100180927100180982+intron-Distal3.183463.45912HepG2HNRNPC
chr15100120370100120417+intron-Distal3.920213.79098HepG2SUGP2
chr15100142979100143049+intron-Distal6.0871210.98400K562EIF4G2
chr15100106405100106458+intron-Distal,intron-Proximal4.498125.27767HepG2GTF2F1
chr15100186265100186338+intron-Distal3.151063.93901K562KHSRP
chr15100106385100106469+intron-Distal,intron-Proximal5.091698.30587HepG2PRPF4
chr15100186920100187002+intron-Distal3.299444.03817HepG2KHSRP
chr15100177205100177293+intron-Distal4.223514.10688K562KHSRP
chr15100189062100189237+intron-Distal3.064924.96160K562KHSRP
chr15100120554100120612+intron-Distal3.214503.10640HepG2SUGP2
chr15100111735100111778+intron-Distal3.384073.84025HepG2SUGP2
chr15100130863100130904+intron-Distal3.953773.39864HepG2SUGP2
chr15100106406100106454+intron-Distal,intron-Proximal4.460114.97297K562TIA1
chr15100107074100107103+intron-Distal4.281394.10564HepG2CSTF2T
chr15100106404100106463+intron-Distal,intron-Proximal4.4449115.02261HepG2FAM120A
chr15100120001100120044+intron-Distal3.767793.29248HepG2SUGP2
chr15100176725100176789+intron-Distal3.945793.80060HepG2HNRNPC
chr15100180286100180380+intron-Distal3.556513.90146K562KHSRP
chr15100112451100112560+intron-Distal3.457963.33633HepG2MATR3
chr15100106851100106912+intron-Distal,intron-Proximal4.622806.08649K562CSTF2T
chr15100204036100204144+intron-Distal3.135654.81700HepG2U2AF2
chr15100118295100118364+intron-Distal3.758805.30446HepG2SUGP2
chr15100112755100112799+intron-Distal4.088733.54208HepG2SUGP2
chr15100236530100236575+intron-Distal5.7481913.05850HepG2HNRNPL
chr15100180380100180444+intron-Distal3.459324.72639K562KHSRP
chr15100180521100180591+intron-Distal4.264033.66668K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MEF2A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MEF2A is not available on ENCORE database.

  • 79 RBPs can affect the levels of MEF2A.  








The Knockdown/knockout RNA-Seq assay for MEF2A is not available on ENCORE database.





79 RBPs can affect the gene expression of MEF2A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MEF2AENSG00000068305.13685.02110815.90690-0.252302.107901.56280HepG2ACO1
MEF2AENSG00000068305.13767.869701196.89900-0.640405.244404.54120HepG2AKAP1
MEF2AENSG00000068305.131022.19600819.821700.318203.186202.36970HepG2AKAP8L
MEF2AENSG00000068305.13762.111101053.96820-0.467803.986303.28200HepG2BOP1
MEF2AENSG00000068305.13770.93910938.05590-0.283102.002401.33850HepG2CALR
MEF2AENSG00000068305.13689.99190815.82760-0.241702.032001.44960HepG2CKAP4
MEF2AENSG00000068305.131385.99170957.129500.534002.934802.14590HepG2CNOT7
MEF2AENSG00000068305.131164.451001000.979800.218102.313501.62770HepG2DAZAP1
MEF2AENSG00000068305.13572.29730754.64200-0.399004.516503.48480HepG2DDX19B
MEF2AENSG00000068305.13416.51710653.29360-0.649405.906104.95690HepG2DDX21
MEF2AENSG00000068305.13751.241001146.51420-0.609905.503004.64760HepG2DDX3X
MEF2AENSG00000068305.13391.77830590.98690-0.593103.226102.40030HepG2DDX55
MEF2AENSG00000068305.131844.872801098.800400.747502.283901.39850HepG2DDX59
MEF2AENSG00000068305.13836.83420688.859400.280602.154301.52550HepG2DNAJC21
MEF2AENSG00000068305.13447.95720682.73630-0.608008.640307.56480HepG2DNAJC2
MEF2AENSG00000068305.13879.34600601.641600.547403.606902.33180HepG2AGO1
MEF2AENSG00000068305.131199.19650987.575300.280002.782201.94320HepG2EIF4G1
MEF2AENSG00000068305.131221.35070916.317700.414503.141501.98130HepG2ESF1
MEF2AENSG00000068305.13552.28150695.45840-0.332602.077901.50890HepG2HNRNPA1
MEF2AENSG00000068305.131002.99130773.555500.374602.729402.03990HepG2HNRNPC
MEF2AENSG00000068305.131372.438001046.827100.390603.006102.35400HepG2HNRNPLL
MEF2AENSG00000068305.13576.38950768.44220-0.414904.288503.54720HepG2HNRNPU
MEF2AENSG00000068305.13747.53330995.43050-0.413202.834902.15320HepG2IGF2BP2
MEF2AENSG00000068305.131103.909301435.50040-0.378902.140201.41690HepG2LARP4
MEF2AENSG00000068305.13574.96540864.36680-0.588206.288805.11470HepG2MSI2
MEF2AENSG00000068305.13834.520601087.01070-0.381302.426501.83090HepG2NCBP2
MEF2AENSG00000068305.13702.93370992.57250-0.497805.543904.46950HepG2NOL12
MEF2AENSG00000068305.131008.19870760.643000.406404.711203.63970HepG2PARN
MEF2AENSG00000068305.13789.22290964.54190-0.289402.610402.01640HepG2PCBP1
MEF2AENSG00000068305.131102.64440814.741800.436505.680004.61320HepG2PRPF4
MEF2AENSG00000068305.13763.00440456.031800.742507.042705.82300HepG2PRPF8
MEF2AENSG00000068305.131151.131101005.844000.194501.905101.39300HepG2PUM1
MEF2AENSG00000068305.131237.806901005.098300.300302.620701.96710HepG2PUM2
MEF2AENSG00000068305.131718.124401062.912100.6927012.7895011.58900HepG2QKI
MEF2AENSG00000068305.131408.30050895.252000.653503.408902.62870HepG2RAVER1
MEF2AENSG00000068305.131493.566101208.087700.305902.773401.91600HepG2RBM15
MEF2AENSG00000068305.131240.82010964.684500.363102.071801.48300HepG2RBM25
MEF2AENSG00000068305.131288.41600878.997800.551603.251202.22730HepG2RPS10
MEF2AENSG00000068305.13671.64920451.122900.574104.074403.14240HepG2RRP9
MEF2AENSG00000068305.13759.453001489.28570-0.971602.612901.31060HepG2SF1
MEF2AENSG00000068305.131781.590501036.189900.7818011.6626010.30620HepG2SF3B1
MEF2AENSG00000068305.13800.449001152.92940-0.526402.823402.03470HepG2SNRNP70
MEF2AENSG00000068305.131705.015801250.101100.447608.166107.43140HepG2SRFBP1
MEF2AENSG00000068305.131802.990301114.836100.693504.535703.22580HepG2SRSF3
MEF2AENSG00000068305.131086.59370935.551800.215801.851601.32520HepG2SRSF5
MEF2AENSG00000068305.131129.90680867.722900.380805.029704.32630HepG2SRSF9
MEF2AENSG00000068305.131302.219901085.379600.262702.805002.29020HepG2SSB
MEF2AENSG00000068305.131247.41120836.572900.576303.130801.84470HepG2SUB1
MEF2AENSG00000068305.13681.999101063.96190-0.6416011.2998010.18680HepG2SUCLG1
MEF2AENSG00000068305.13771.71350588.357000.391302.325801.69880HepG2SUPV3L1
MEF2AENSG00000068305.13510.85060746.73540-0.547705.508704.85190HepG2TIAL1
MEF2AENSG00000068305.13616.65570753.35680-0.288902.462601.92370HepG2TRIM56
MEF2AENSG00000068305.131239.72770913.693100.440103.169702.50000HepG2U2AF1
MEF2AENSG00000068305.13459.91260347.587000.403902.345001.64490HepG2UCHL5
MEF2AENSG00000068305.131032.098101265.25410-0.293803.793003.18000HepG2ZNF622
MEF2AENSG00000068305.13433.59040579.56100-0.418603.471802.84920K562AGGF1
MEF2AENSG00000068305.13487.91330636.79470-0.384202.213901.34550K562AKAP8
MEF2AENSG00000068305.13439.69340603.04590-0.455803.276002.56350K562AKAP8L
MEF2AENSG00000068305.13441.05110630.20680-0.514904.245503.27310K562CPSF6
MEF2AENSG00000068305.13910.96400685.397900.410404.421703.62320K562DDX47
MEF2AENSG00000068305.13504.41730649.00590-0.363602.890301.99380K562DKC1
MEF2AENSG00000068305.13343.90270188.526500.867103.952902.72580K562EIF3A
MEF2AENSG00000068305.13418.86810273.416900.615303.532202.35010K562EIF3D
MEF2AENSG00000068305.13431.56810571.15240-0.404302.541201.72990K562FIP1L1
MEF2AENSG00000068305.13408.27590279.957200.544203.037801.84470K562FKBP4
MEF2AENSG00000068305.13410.26410253.159100.696402.640602.04710K562FXR1
MEF2AENSG00000068305.13376.35010275.436400.450301.914001.33790K562G3BP2
MEF2AENSG00000068305.13530.73810322.419100.719006.243205.38120K562HNRNPC
MEF2AENSG00000068305.13335.00510469.75410-0.487702.625901.72140K562HNRNPM
MEF2AENSG00000068305.13470.11600640.03010-0.445103.517602.57660K562KIF1C
MEF2AENSG00000068305.13382.42730587.31730-0.619005.105603.89610K562METAP2
MEF2AENSG00000068305.13597.83830429.389100.477404.442603.43890K562MTPAP
MEF2AENSG00000068305.13415.62670302.205900.459702.621301.66950K562PCBP2
MEF2AENSG00000068305.13984.74030481.729901.0314012.7513010.97980K562PCBP3
MEF2AENSG00000068305.13707.21450369.522500.9364013.0363011.36490K562POLR2G
MEF2AENSG00000068305.13454.36140648.33210-0.512903.943802.94060K562PPIG
MEF2AENSG00000068305.13352.93660248.506600.506002.411501.70920K562PRPF8
MEF2AENSG00000068305.131188.45960826.444500.524004.122303.13230K562PUF60
MEF2AENSG00000068305.13439.42220582.72970-0.407202.863702.26180K562RBM15
MEF2AENSG00000068305.13226.69040316.46900-0.481302.511701.71410K562RBM22
MEF2AENSG00000068305.13455.05310253.125300.846106.004504.79600K562RPS19
MEF2AENSG00000068305.13374.93890286.398500.388502.194901.43470K562SF3B4
MEF2AENSG00000068305.13636.38770482.288000.399903.572102.52480K562SRPK2
MEF2AENSG00000068305.13358.21230254.647400.492202.436601.48710K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MEF2A is not available on ENCORE database.





3 RBPs can affect the splicing of MEF2A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMEF2AENSG00000068305.13chr15+100138634100138716100105904100106309100173182100173378-0.470000.000000.00000excludedHepG2U2AF2
SEMEF2AENSG00000068305.13chr15+100138634100138716100106184100106309100173182100173378-0.272000.001200.07359excludedK562HNRNPUL1
MXEMEF2AENSG00000068305.13chr15+1002115271002116591002117241002118741001857651001859691002145971002148170.131000.008100.045491includedHepG2U2AF2
MXEMEF2AENSG00000068305.13chr15+1002115271002116591002117241002118621001857651001859691002145971002148170.177000.000900.007481includedHepG2U2AF2
MXEMEF2AENSG00000068305.13chr15+100246933100247060100250838100250965100230445100230633100252594100256629-0.230000.004840.029732includedHepG2U2AF2
MXEMEF2AENSG00000068305.13chr15+1002115271002116591002117241002118741001857651001859691002145971002148170.225000.000070.009341includedHepG2LARP4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MEF2A is not avaliable on ENCORE database.