MCF2L

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MCF2L	ENSG00000126217.20	0.07	0.04	0.06	ENCSR000AEF
HepG2	MCF2L	ENSG00000126217.20	17.52	8.54	13.03	ENCSR985KAT
K562	MCF2L	ENSG00000126217.20	0.00	0.00	0.00	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MCF2L is not avaliable on ENCORE database.

Proteins bound to RNA

MCF2L RNA is bound by 45 proteins.

eCLIP assay for MCF2L is not avaliable on ENCORE database.

45 proteins are bound to MCF2L RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	113750749	113750803	+	3'-UTR,CDS,intron-Proximal	4.19622	9.56105	HepG2	PPIG
chr13	113751147	113751231	+	3'-UTR,CDS	3.42849	3.05408	HepG2	UPF1
chr13	113750869	113750956	+	3'-UTR,CDS	3.62712	7.36645	HepG2	PPIG
chr13	113701031	113701089	+	3'-UTR,intron-Distal	4.43245	5.41529	HepG2	CSTF2T
chr13	113751599	113751673	+	3'-UTR	3.50726	4.00411	HepG2	LSM11
chr13	113707057	113707160	+	3'-UTR,intron-Distal,polyA_site	3.47148	8.61296	HepG2	AGGF1
chr13	113751078	113751137	+	3'-UTR,CDS,intron-Proximal	4.85496	6.46301	HepG2	PPIG
chr13	113752342	113752453	+	3'-UTR	3.27031	3.65531	HepG2	LSM11
chr13	113707063	113707140	+	3'-UTR,intron-Distal,polyA_site	4.59220	21.07144	HepG2	HNRNPL
chr13	113751473	113751515	+	3'-UTR	3.80154	3.19682	HepG2	PABPN1
chr13	113751608	113751674	+	3'-UTR	3.03911	3.45280	HepG2	BCLAF1
chr13	113669048	113669118	+	5'-UTR,CDS,intron-Proximal	4.11523	5.30739	HepG2	BUD13
chr13	113669076	113669165	+	5'-UTR,CDS,intron-Proximal	3.86929	3.48077	HepG2	UCHL5
chr13	113656178	113656221	+	5'-UTR,intron-Distal	3.79509	6.10842	HepG2	CSTF2T
chr13	113739397	113739506	+	CDS,intron-Proximal	3.78026	10.64832	HepG2	PPIG
chr13	113729493	113729539	+	CDS,intron-Proximal	3.57499	3.81059	HepG2	AQR
chr13	113740443	113740562	+	CDS	3.47822	6.92518	HepG2	PPIG
chr13	113724370	113724401	+	CDS,intron-Proximal	3.20312	3.99124	HepG2	PPIG
chr13	113681114	113681192	+	CDS,intron-Distal,intron-Proximal	4.81345	6.44863	HepG2	CSTF2T
chr13	113678956	113678998	+	CDS,intron-Proximal	3.79104	4.27261	HepG2	GRWD1
chr13	113736740	113736848	+	CDS,intron-Proximal	3.22039	5.93573	HepG2	BCLAF1
chr13	113720359	113720434	+	CDS,intron-Proximal	3.67314	9.24355	HepG2	PPIG
chr13	113750627	113750691	+	CDS,intron-Proximal	6.32313	8.30797	HepG2	SF3A3
chr13	113669141	113669161	+	CDS,intron-Proximal	3.92189	9.51790	HepG2	PPIG
chr13	113745409	113745472	+	CDS,intron-Distal,intron-Proximal	3.19238	3.42396	HepG2	U2AF2
chr13	113728801	113728878	+	CDS,intron-Proximal	3.15334	6.24036	HepG2	EIF3H
chr13	113733046	113733126	+	CDS,intron-Proximal	3.61234	3.95154	HepG2	EFTUD2
chr13	113748776	113748830	+	CDS,intron-Proximal	3.63359	5.08270	HepG2	SF3B4
chr13	113738316	113738387	+	CDS,intron-Proximal	4.32295	6.92541	HepG2	PPIG
chr13	113742101	113742114	+	CDS,intron-Proximal	3.69587	4.68902	HepG2	PPIG
chr13	113736740	113736779	+	CDS,intron-Proximal	4.76352	4.29511	HepG2	EIF3H
chr13	113739484	113739534	+	CDS,intron-Proximal	3.61399	4.50387	HepG2	AQR
chr13	113730298	113730375	+	CDS	3.59150	3.21309	HepG2	GRWD1
chr13	113715007	113715068	+	CDS,intron-Proximal	3.31857	3.72729	HepG2	GRWD1
chr13	113720434	113720487	+	CDS,intron-Proximal	4.58057	8.98365	HepG2	PPIG
chr13	113718644	113718739	+	CDS,intron-Proximal	4.32492	12.11762	HepG2	PPIG
chr13	113741543	113741744	+	CDS,intron-Proximal	3.75700	13.18299	HepG2	PPIG
chr13	113733030	113733102	+	CDS,intron-Proximal	3.78676	9.39957	HepG2	PRPF8
chr13	113742672	113742722	+	CDS,intron-Proximal	3.99561	7.36645	HepG2	PPIG
chr13	113730230	113730285	+	CDS,intron-Proximal	3.27278	3.09957	HepG2	AQR
chr13	113742707	113742750	+	CDS,intron-Proximal	3.41377	6.04280	HepG2	PRPF8
chr13	113742637	113742716	+	CDS,intron-Proximal	3.30171	3.68924	HepG2	PRPF4
chr13	113743950	113744064	+	CDS,intron-Proximal	3.51821	9.91328	HepG2	PPIG
chr13	113681209	113681269	+	CDS,intron-Distal	3.55167	5.32871	HepG2	CSTF2T
chr13	113699595	113699679	+	CDS,intron-Proximal	3.64806	5.39266	HepG2	GRWD1
chr13	113739465	113739540	+	CDS,intron-Proximal	4.52274	19.33419	HepG2	PRPF8
chr13	113669137	113669161	+	CDS,intron-Proximal	3.91349	4.93175	HepG2	GRWD1
chr13	113669102	113669141	+	CDS	3.11465	4.85880	HepG2	PPIG
chr13	113724411	113724463	+	CDS	4.71589	4.97342	HepG2	PPIG
chr13	113715011	113715065	+	CDS,intron-Proximal	5.66983	19.90075	HepG2	PRPF8
chr13	113728809	113728882	+	CDS,intron-Proximal	3.87229	8.74774	HepG2	PPIG
chr13	113729310	113729373	+	CDS,intron-Proximal	3.92331	4.06531	HepG2	GRWD1
chr13	113742072	113742146	+	CDS,intron-Proximal	3.86358	25.89157	HepG2	PRPF8
chr13	113735526	113735595	+	CDS,intron-Proximal	3.92792	3.35081	HepG2	G3BP1
chr13	113742570	113742657	+	CDS,intron-Proximal	4.49545	11.26784	HepG2	SF3A3
chr13	113699583	113699687	+	CDS,intron-Proximal	4.38591	16.10467	HepG2	PPIG
chr13	113720359	113720446	+	CDS,intron-Proximal	3.61079	3.10693	HepG2	UCHL5
chr13	113735549	113735594	+	CDS,intron-Proximal	3.53464	6.47196	HepG2	BCLAF1
chr13	113739234	113739299	+	CDS,intron-Proximal	3.16721	6.00978	HepG2	PPIG
chr13	113741768	113741809	+	CDS,intron-Proximal	3.55630	5.65303	HepG2	PRPF8
chr13	113739205	113739227	+	CDS,intron-Proximal	4.43770	4.38106	HepG2	PPIG
chr13	113729429	113729502	+	CDS	3.01271	4.40420	HepG2	PPIG
chr13	113714907	113714958	+	CDS	3.69678	3.41665	HepG2	GRWD1
chr13	113743921	113744074	+	CDS,intron-Proximal	3.79679	8.53471	HepG2	GRWD1
chr13	113736739	113736778	+	CDS,intron-Proximal	3.15776	5.32969	HepG2	PPIG
chr13	113742030	113742121	+	CDS,intron-Proximal	3.73148	5.59833	HepG2	GRWD1
chr13	113739207	113739299	+	CDS,intron-Proximal	3.82241	6.02862	HepG2	GRWD1
chr13	113705685	113705733	+	intron-Distal	3.35533	6.05986	HepG2	CSTF2T
chr13	113617658	113617705	+	intron-Distal	3.86635	3.16310	HepG2	CSTF2T
chr13	113568491	113568565	+	intron-Distal	3.77887	6.02877	HepG2	SUGP2
chr13	113584295	113584393	+	intron-Distal	4.48051	5.65087	HepG2	CSTF2
chr13	113649956	113650022	+	intron-Distal	3.63774	7.32269	HepG2	CSTF2T
chr13	113567353	113567420	+	intron-Distal	4.60902	4.01944	HepG2	FUBP3
chr13	113738499	113738779	+	intron-Distal	3.09625	6.08046	HepG2	DDX59
chr13	113652060	113652116	+	intron-Distal	5.16427	7.65828	HepG2	CSTF2T
chr13	113598336	113598416	+	intron-Distal	3.37809	3.48399	HepG2	CSTF2T
chr13	113615652	113615778	+	intron-Distal	5.08673	8.56618	HepG2	CSTF2T
chr13	113715641	113715713	+	intron-Distal	5.15573	17.66502	HepG2	DDX59
chr13	113656693	113656758	+	intron-Distal	5.13632	9.60672	HepG2	CSTF2T
chr13	113654248	113654371	+	intron-Distal	4.95635	15.07994	HepG2	CSTF2T
chr13	113626575	113626612	+	intron-Distal	4.19044	4.29728	HepG2	FAM120A
chr13	113634973	113635035	+	intron-Distal	3.15151	7.23670	HepG2	CSTF2T
chr13	113568663	113568720	+	intron-Distal	4.21450	4.61447	HepG2	SUGP2
chr13	113617320	113617374	+	intron-Distal	3.26690	3.48399	HepG2	CSTF2T
chr13	113705543	113705627	+	intron-Distal	4.28887	13.85674	HepG2	FAM120A
chr13	113627237	113627344	+	intron-Distal	5.07948	17.86639	HepG2	CSTF2T
chr13	113634814	113634870	+	intron-Distal	5.35902	10.48231	HepG2	CSTF2T
chr13	113716049	113716134	+	intron-Distal	3.69981	4.59716	HepG2	HNRNPK
chr13	113707905	113707956	+	intron-Distal	5.28795	17.37919	HepG2	XPO5
chr13	113598494	113598586	+	intron-Distal	4.12626	4.10323	HepG2	PRPF4
chr13	113749744	113749833	+	intron-Distal	3.70030	4.77128	HepG2	RBFOX2
chr13	113570600	113570640	+	intron-Distal	3.88121	3.54208	HepG2	SUGP2
chr13	113565586	113565633	+	intron-Distal	4.32125	4.36133	HepG2	CSTF2T
chr13	113683968	113684081	+	intron-Distal	4.81541	7.44133	HepG2	CSTF2T
chr13	113602531	113602603	+	intron-Distal	4.79480	6.23638	HepG2	QKI
chr13	113703665	113703752	+	intron-Distal	3.35739	6.59225	HepG2	CSTF2T
chr13	113713320	113713375	+	intron-Distal	4.07523	4.10339	HepG2	CSTF2T
chr13	113716173	113716234	+	intron-Distal	4.91945	12.31091	HepG2	CSTF2T
chr13	113634412	113634438	+	intron-Distal	3.83660	3.40229	HepG2	CSTF2T
chr13	113639097	113639165	+	intron-Distal	4.27314	4.36133	HepG2	CSTF2T
chr13	113656341	113656401	+	intron-Distal,intron-Proximal	4.36384	7.58727	HepG2	CSTF2T
chr13	113707193	113707254	+	intron-Distal	5.47515	20.16275	HepG2	HNRNPL
chr13	113596866	113596940	+	intron-Distal	4.75211	5.16036	HepG2	CSTF2T
chr13	113665969	113666052	+	intron-Distal	4.95485	8.04861	HepG2	AKAP1
chr13	113715431	113715512	+	intron-Distal	4.18412	4.07628	HepG2	PTBP1
chr13	113627180	113627244	+	intron-Distal	3.17106	3.15160	HepG2	STAU2
chr13	113705087	113705155	+	intron-Distal	6.47337	23.73871	HepG2	FAM120A
chr13	113649110	113649149	+	intron-Distal	4.39579	4.92128	HepG2	CSTF2T
chr13	113651972	113652021	+	intron-Distal	3.67682	4.92762	HepG2	CSTF2T
chr13	113616321	113616380	+	intron-Distal	4.21287	4.77636	HepG2	HNRNPL
chr13	113652926	113652962	+	intron-Distal	3.56562	4.92762	HepG2	CSTF2T
chr13	113707140	113707193	+	intron-Distal	4.55469	14.41410	HepG2	HNRNPL
chr13	113717152	113717231	+	intron-Distal	3.84499	7.36309	HepG2	DDX59
chr13	113556780	113556870	+	intron-Distal,intron-Proximal	4.57730	10.61789	HepG2	RBFOX2
chr13	113655423	113655435	+	intron-Distal	3.94235	3.69819	HepG2	CSTF2T
chr13	113658468	113658532	+	intron-Distal	4.87360	8.08715	HepG2	CSTF2T
chr13	113665935	113666078	+	intron-Distal	3.49270	5.40194	HepG2	FAM120A
chr13	113598326	113598380	+	intron-Distal	4.14921	3.75888	HepG2	FAM120A
chr13	113653245	113653323	+	intron-Distal	5.60789	11.53530	HepG2	CSTF2T
chr13	113715408	113715496	+	intron-Distal	3.92600	4.74790	HepG2	ILF3
chr13	113649858	113649917	+	intron-Distal	5.52403	11.53530	HepG2	CSTF2T
chr13	113705416	113705490	+	intron-Distal	4.42156	10.59961	HepG2	CSTF2T
chr13	113658065	113658112	+	intron-Distal	3.37360	3.96999	HepG2	CSTF2T
chr13	113582483	113582538	+	intron-Distal	3.22634	3.34034	HepG2	HLTF
chr13	113725889	113725952	+	intron-Distal	4.09159	3.84389	HepG2	SUGP2
chr13	113699725	113699850	+	intron-Distal,intron-Proximal	3.33605	3.51682	HepG2	RBFOX2
chr13	113657371	113657421	+	intron-Distal	3.85256	6.61028	HepG2	CSTF2T
chr13	113654972	113655015	+	intron-Distal	4.74027	7.19649	HepG2	CSTF2T
chr13	113689302	113689393	+	intron-Distal	3.38434	4.60046	HepG2	CSTF2T
chr13	113648741	113648768	+	intron-Distal	4.10462	3.44758	HepG2	CSTF2T
chr13	113707911	113708017	+	intron-Distal	4.42689	4.12480	HepG2	HNRNPM
chr13	113655151	113655181	+	intron-Distal	3.35533	4.14880	HepG2	CSTF2T
chr13	113655055	113655085	+	intron-Distal	3.37360	3.96999	HepG2	CSTF2T
chr13	113716181	113716254	+	intron-Distal	3.56045	8.41278	HepG2	ILF3
chr13	113656305	113656403	+	intron-Distal,intron-Proximal	4.06145	4.88931	HepG2	FAM120A
chr13	113592318	113592383	+	intron-Distal	4.98574	6.96728	HepG2	HNRNPM
chr13	113716199	113716322	+	intron-Distal	3.79346	5.01332	HepG2	GTF2F1
chr13	113564951	113565027	+	intron-Distal	5.28578	7.78003	HepG2	CSTF2
chr13	113567488	113567588	+	intron-Distal	4.79030	4.01944	HepG2	FUBP3
chr13	113648447	113648505	+	intron-Distal	4.76112	7.35173	HepG2	CSTF2T
chr13	113648317	113648358	+	intron-Distal	3.21263	4.27427	HepG2	CSTF2T
chr13	113703952	113704014	+	intron-Distal	4.34415	4.36133	HepG2	CSTF2T
chr13	113652232	113652275	+	intron-Distal	3.04412	4.27427	HepG2	CSTF2T
chr13	113707356	113707398	+	intron-Distal	4.58787	15.27241	HepG2	HNRNPL
chr13	113636729	113636779	+	intron-Distal	3.89053	7.10319	HepG2	CSTF2T
chr13	113616428	113616503	+	intron-Distal	4.32509	3.07260	HepG2	AGGF1
chr13	113681686	113681761	+	intron-Distal	5.02731	8.83237	HepG2	CSTF2T
chr13	113597914	113598050	+	intron-Distal	3.82752	13.08437	HepG2	CSTF2T
chr13	113681980	113682011	+	intron-Distal	3.95856	3.19526	HepG2	CSTF2T
chr13	113667597	113667642	+	intron-Distal	3.79760	3.19526	HepG2	CSTF2T
chr13	113716495	113716554	+	intron-Distal	3.31833	7.93684	HepG2	CSTF2T
chr13	113648659	113648686	+	intron-Distal	3.39841	3.48399	HepG2	CSTF2T
chr13	113586846	113586965	+	intron-Distal	4.07553	4.08455	HepG2	CSTF2
chr13	113632907	113632969	+	intron-Distal	4.92660	8.32666	HepG2	CSTF2T
chr13	113649504	113649539	+	intron-Distal	3.35810	4.37279	HepG2	CSTF2T
chr13	113652727	113652784	+	intron-Distal	3.68532	8.04077	HepG2	CSTF2T
chr13	113636911	113636942	+	intron-Distal	3.30557	4.21158	HepG2	CSTF2T
chr13	113748225	113748275	+	intron-Distal	4.05952	3.71028	HepG2	NKRF
chr13	113650517	113650560	+	intron-Distal	3.70127	5.16304	HepG2	CSTF2T
chr13	113635922	113635958	+	intron-Distal	4.45535	5.36332	HepG2	CSTF2T
chr13	113715426	113715529	+	intron-Distal	4.68356	26.49817	HepG2	DDX59
chr13	113574670	113574724	+	intron-Distal	4.05841	3.07980	HepG2	HNRNPM
chr13	113634449	113634516	+	intron-Distal	4.86315	15.57711	HepG2	CSTF2T
chr13	113666798	113666854	+	intron-Distal	3.93036	3.45716	HepG2	AKAP1
chr13	113654796	113654834	+	intron-Distal	3.69437	5.62912	HepG2	CSTF2T
chr13	113707254	113707317	+	intron-Distal	4.56898	17.18975	HepG2	HNRNPL
chr13	113747422	113747474	+	intron-Distal	3.83814	4.69571	HepG2	FKBP4
chr13	113634092	113634138	+	intron-Distal,intron-Proximal	3.22493	3.27222	HepG2	CSTF2T
chr13	113705188	113705287	+	intron-Distal	5.55129	11.75617	HepG2	FAM120A
chr13	113592087	113592301	+	intron-Distal	4.68868	15.84594	HepG2	HNRNPM
chr13	113627271	113627333	+	intron-Distal	5.45020	9.20567	HepG2	FAM120A
chr13	113659649	113659703	+	intron-Distal	3.48135	6.13981	HepG2	CSTF2T
chr13	113627137	113627202	+	intron-Distal	4.60548	4.29728	HepG2	FAM120A
chr13	113705642	113705713	+	intron-Distal	3.67767	6.94777	HepG2	FAM120A
chr13	113656441	113656513	+	intron-Distal	3.85673	7.41671	HepG2	FAM120A
chr13	113714300	113714366	+	intron-Distal	3.15883	3.49516	HepG2	CSTF2T
chr13	113549256	113549323	+	intron-Distal	3.35070	3.92299	HepG2	CSTF2T
chr13	113627138	113627224	+	intron-Distal	5.40197	10.69076	HepG2	DKC1
chr13	113707358	113707400	+	intron-Distal	3.34115	6.36213	HepG2	XPO5
chr13	113746833	113746911	+	intron-Distal	3.55247	4.95606	HepG2	XPO5
chr13	113745790	113745848	+	intron-Distal	3.16275	3.48042	HepG2	NKRF
chr13	113549267	113549338	+	intron-Distal	3.86397	3.38470	HepG2	NKRF
chr13	113717278	113717378	+	intron-Distal	4.13399	6.74466	HepG2	DDX59
chr13	113750262	113750332	+	intron-Distal	3.43425	4.36184	HepG2	PRPF4
chr13	113684849	113684974	+	intron-Distal	3.64879	3.69388	HepG2	XPO5
chr13	113626762	113626880	+	intron-Distal	6.31196	14.99573	HepG2	DKC1
chr13	113636597	113636653	+	intron-Distal	5.07523	9.35257	HepG2	CSTF2T
chr13	113565330	113565379	+	intron-Distal	3.29055	3.48399	HepG2	CSTF2T
chr13	113705177	113705225	+	intron-Distal	5.65959	14.62139	HepG2	CSTF2T
chr13	113716199	113716292	+	intron-Distal	3.35739	3.30279	HepG2	DROSHA
chr13	113598130	113598204	+	intron-Distal	4.95252	6.84460	HepG2	CSTF2T
chr13	113705278	113705315	+	intron-Distal	4.56007	5.41529	HepG2	CSTF2T
chr13	113561898	113561958	+	intron-Distal	4.81389	5.72853	HepG2	HNRNPM
chr13	113705097	113705142	+	intron-Distal	3.87179	6.85787	HepG2	CSTF2T
chr13	113567604	113567654	+	intron-Distal	4.05128	5.51967	HepG2	FUBP3
chr13	113650734	113650807	+	intron-Distal	3.57508	5.45050	HepG2	CSTF2T
chr13	113598304	113598416	+	intron-Distal	4.71816	6.32182	HepG2	PRPF4
chr13	113636388	113636477	+	intron-Distal	3.33565	6.79749	HepG2	CSTF2T
chr13	113616541	113616798	+	intron-Distal	5.45994	24.54749	HepG2	AGGF1
chr13	113705536	113705675	+	intron-Distal	3.82126	5.08364	HepG2	PRPF4
chr13	113682111	113682170	+	intron-Distal	3.92409	7.10319	HepG2	CSTF2T
chr13	113716254	113716349	+	intron-Distal	4.74864	5.78422	HepG2	ILF3
chr13	113705333	113705375	+	intron-Distal	4.05728	7.72301	HepG2	CSTF2T
chr13	113627177	113627266	+	intron-Distal	3.92526	3.07706	HepG2	TIAL1
chr13	113715840	113715914	+	intron-Distal	3.04354	3.80877	HepG2	HLTF
chr13	113627267	113627328	+	intron-Distal	3.84423	9.65156	HepG2	DKC1
chr13	113648590	113648662	+	intron-Distal	4.51992	4.57154	HepG2	FAM120A
chr13	113623126	113623204	+	intron-Distal,intron-Proximal	3.92409	6.73995	HepG2	CSTF2T
chr13	113715400	113715513	+	intron-Distal	3.85389	15.70690	HepG2	CSTF2T
chr13	113740218	113740268	+	intron-Distal	3.77833	8.01217	HepG2	EFTUD2
chr13	113568856	113568914	+	intron-Distal	3.02597	3.23296	HepG2	SUGP2
chr13	113716134	113716269	+	intron-Distal	5.76468	44.10020	HepG2	PCBP2
chr13	113739730	113739804	+	intron-Distal	3.64154	6.85446	HepG2	XPO5
chr13	113583950	113584020	+	intron-Distal	4.04031	3.94684	HepG2	CSTF2T
chr13	113669567	113669666	+	intron-Distal	5.69445	14.33214	HepG2	DKC1
chr13	113716170	113716296	+	intron-Distal	5.75148	63.76125	HepG2	DDX59
chr13	113659291	113659350	+	intron-Distal	3.99452	7.96122	HepG2	CSTF2T
chr13	113707956	113708020	+	intron-Distal	4.91682	18.07611	HepG2	XPO5
chr13	113707744	113707806	+	intron-Distal	3.27037	6.05986	HepG2	CSTF2T
chr13	113653019	113653060	+	intron-Distal	3.76480	5.62912	HepG2	CSTF2T
chr13	113657766	113657815	+	intron-Distal	3.19231	5.45050	HepG2	CSTF2T
chr13	113716134	113716302	+	intron-Distal	4.71086	17.69433	HepG2	HNRNPK
chr13	113582487	113582549	+	intron-Distal	3.15883	3.49516	HepG2	CSTF2T
chr13	113561821	113561898	+	intron-Distal	3.57165	5.42728	HepG2	HNRNPM
chr13	113570040	113570088	+	intron-Distal	3.21450	3.69184	HepG2	SUGP2
chr13	113707344	113707407	+	intron-Distal	4.30683	7.88523	HepG2	AGGF1
chr13	113667313	113667393	+	intron-Distal	3.11631	5.36249	HepG2	CSTF2T
chr13	113738535	113738739	+	intron-Distal	4.61030	9.64897	HepG2	HNRNPK
chr13	113715419	113715521	+	intron-Distal	4.71629	5.56287	HepG2	GTF2F1
chr13	113661044	113661077	+	intron-Distal	3.83660	3.44758	HepG2	CSTF2T
chr13	113654028	113654115	+	intron-Distal	4.52403	10.54254	HepG2	CSTF2T
chr13	113705419	113705477	+	intron-Distal	4.95716	8.10881	HepG2	FAM120A
chr13	113710234	113710333	+	intron-Distal	3.56648	4.83336	HepG2	FAM120A
chr13	113657771	113657823	+	intron-Distal	4.49270	5.15564	HepG2	FAM120A
chr13	113628316	113628372	+	intron-Distal	4.56562	5.60609	HepG2	CSTF2T
chr13	113686481	113686555	+	intron-Distal	3.90535	3.44758	HepG2	CSTF2T
chr13	113625720	113625819	+	intron-Distal	3.29313	5.45050	HepG2	CSTF2T
chr13	113623845	113623931	+	intron-Distal,intron-Proximal	3.83820	3.06140	HepG2	NKRF
chr13	113597612	113597721	+	intron-Distal	3.03525	5.15590	HepG2	CSTF2T
chr13	113627175	113627213	+	intron-Distal	3.46016	3.49516	HepG2	CSTF2T
chr13	113742234	113742283	+	intron-Distal	4.15155	3.38114	HepG2	GRWD1
chr13	113616587	113616659	+	intron-Distal	3.21124	5.38424	HepG2	HNRNPL
chr13	113661179	113661273	+	intron-Distal	3.88788	5.85439	HepG2	CSTF2T
chr13	113715652	113715706	+	intron-Distal	4.11137	4.12666	HepG2	HNRNPK
chr13	113667299	113667385	+	intron-Distal	3.47632	4.51064	HepG2	AKAP1
chr13	113649961	113650035	+	intron-Distal	3.21123	4.72468	HepG2	FAM120A
chr13	113715422	113715480	+	intron-Distal	4.10851	4.33022	HepG2	HNRNPK
chr13	113575039	113575114	+	intron-Distal	4.15679	3.24150	HepG2	HLTF
chr13	113575034	113575089	+	intron-Distal	4.14602	4.10323	HepG2	PRPF4
chr13	113745208	113745283	+	intron-Distal	3.00323	4.45075	HepG2	HNRNPK
chr13	113636962	113637035	+	intron-Distal	4.54352	10.15405	HepG2	CSTF2T
chr13	113656440	113656508	+	intron-Distal	5.08505	16.06553	HepG2	CSTF2T
chr13	113715084	113715156	+	intron-Distal,intron-Proximal	3.43536	3.92610	HepG2	GRWD1
chr13	113705225	113705275	+	intron-Distal	4.77998	14.82746	HepG2	CSTF2T
chr13	113705640	113705677	+	intron-Distal	4.88256	7.09999	HepG2	CSTF2T
chr13	113714381	113714438	+	intron-Distal	3.99580	4.48459	HepG2	XPO5
chr13	113724233	113724298	+	intron-Distal,intron-Proximal	4.19338	3.25012	HepG2	FKBP4
chr13	113745512	113745548	+	intron-Distal,intron-Proximal	3.00961	3.27222	HepG2	CSTF2T
chr13	113745356	113745397	+	intron-Distal,intron-Proximal	3.13276	3.33980	HepG2	SF3B4
chr13	113665926	113665969	+	intron-Distal	4.44562	4.92727	HepG2	AKAP1
chr13	113716234	113716301	+	intron-Distal	4.27406	11.65011	HepG2	CSTF2T
chr13	113703230	113703326	+	intron-Distal	4.65151	5.41529	HepG2	CSTF2T
chr13	113567195	113567442	+	intron-Distal	4.05179	4.54121	HepG2	KHSRP
chr13	113568370	113568445	+	intron-Distal	4.07030	3.09122	HepG2	PTBP1
chr13	113716438	113716557	+	intron-Distal	4.24895	20.15810	HepG2	DDX59
chr13	113580347	113580423	+	intron-Distal	3.91027	6.52185	HepG2	HLTF
chr13	113634456	113634504	+	intron-Distal	4.53316	5.74291	HepG2	FAM120A
chr13	113635247	113635296	+	intron-Distal	3.75795	4.92762	HepG2	CSTF2T
chr13	113665936	113666045	+	intron-Distal	3.68973	5.39685	HepG2	CSTF2T
chr13	113658945	113658980	+	intron-Distal	4.40621	5.11753	HepG2	CSTF2T
chr13	113685900	113685995	+	intron-Distal	3.37360	5.68177	HepG2	CSTF2T
chr13	113706585	113706645	+	intron-Distal	3.81736	6.49292	HepG2	CSTF2T
chr13	113581427	113581491	+	intron-Distal	3.29702	3.07152	HepG2	HLTF
chr13	113740202	113740264	+	intron-Distal	4.41638	4.77725	HepG2	GRSF1
chr13	113701382	113701429	+	intron-Distal	3.48221	5.08839	HepG2	CSTF2T
chr13	113705542	113705640	+	intron-Distal	4.17405	13.14650	HepG2	CSTF2T
chr13	113715429	113715478	+	intron-Distal	4.23419	6.14899	HepG2	PCBP2
chr13	113635491	113635517	+	intron-Distal	3.06976	3.00221	HepG2	CSTF2T
chr13	113713495	113713566	+	intron-Distal	3.21713	3.46580	HepG2	CSTF2T
chr13	113656543	113656590	+	intron-Distal	3.78036	6.48652	HepG2	CSTF2T
chr13	113656981	113656993	+	intron-Distal	3.15883	3.49516	HepG2	CSTF2T
chr13	113615615	113615697	+	intron-Distal	5.19339	6.39685	HepG2	CSTF2
chr13	113598513	113598590	+	intron-Distal	4.05868	8.29908	HepG2	CSTF2T
chr13	113727443	113727522	+	intron-Distal	4.18755	3.29248	HepG2	SUGP2
chr13	113705339	113705387	+	intron-Distal	4.43496	3.99130	HepG2	FAM120A
chr13	113745619	113745660	+	intron-Distal	4.10331	4.19345	HepG2	CSTF2T
chr13	113707160	113707239	+	intron-Distal	4.48845	8.36566	HepG2	AGGF1
chr13	113715540	113715589	+	intron-Distal	3.44562	6.36668	HepG2	CSTF2T
chr13	113715855	113715909	+	intron-Distal	5.14225	8.98373	HepG2	CSTF2T
chr13	113705815	113705866	+	intron-Distal	3.44603	9.67468	HepG2	CSTF2T
chr13	113717479	113717534	+	intron-Distal	4.32143	7.10832	HepG2	DDX59
chr13	113601953	113602055	+	intron-Distal	3.85475	6.13983	HepG2	HLTF
chr13	113748771	113748826	+	intron-Proximal	5.11942	8.11845	HepG2	SF3A3
chr13	113748975	113749032	+	intron-Proximal	3.54720	3.33755	HepG2	RBM22
chr13	113742584	113742631	+	intron-Proximal	3.98950	3.50006	HepG2	SF3B4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for MCF2L is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MCF2L is not available on ENCORE database.
70 RBPs can affect the levels of MCF2L.

The Knockdown/knockout RNA-Seq assay for MCF2L is not available on ENCORE database.

70 RBPs can affect the gene expression of MCF2L :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MCF2L	ENSG00000126217.16	1189.26350	1492.86910	-0.32800	2.21200	1.36600	HepG2	ABCF1
MCF2L	ENSG00000126217.16	1074.92360	1377.80970	-0.35810	5.03710	4.26370	HepG2	ACO1
MCF2L	ENSG00000126217.16	672.67350	1569.24240	-1.22210	11.63590	10.61820	HepG2	AKAP1
MCF2L	ENSG00000126217.16	979.53270	630.95260	0.63450	5.00310	3.82480	HepG2	BCLAF1
MCF2L	ENSG00000126217.16	539.09760	918.08530	-0.76810	8.94020	7.94050	HepG2	BOP1
MCF2L	ENSG00000126217.16	1540.27540	1118.12530	0.46200	4.51720	2.96410	HepG2	BUD13
MCF2L	ENSG00000126217.16	1230.31230	1022.74830	0.26650	2.36260	1.76090	HepG2	CELF1
MCF2L	ENSG00000126217.16	932.85080	692.57370	0.42960	4.20450	2.79650	HepG2	DDX1
MCF2L	ENSG00000126217.16	632.64890	891.87740	-0.49540	4.22470	3.40440	HepG2	DDX21
MCF2L	ENSG00000126217.16	1864.73940	957.11480	0.96210	7.15130	5.62030	HepG2	DDX59
MCF2L	ENSG00000126217.16	983.52740	654.99820	0.58640	2.63520	1.67650	HepG2	DHX30
MCF2L	ENSG00000126217.16	1118.98980	1318.17970	-0.23640	2.19720	1.58210	HepG2	DKC1
MCF2L	ENSG00000126217.16	884.85320	679.11400	0.38170	3.67810	2.87390	HepG2	DNAJC21
MCF2L	ENSG00000126217.16	997.29300	673.08840	0.56710	9.99010	8.84290	HepG2	DNAJC2
MCF2L	ENSG00000126217.16	625.36680	842.77210	-0.43040	3.05530	1.92500	HepG2	EIF3G
MCF2L	ENSG00000126217.16	2562.01350	1864.20510	0.45860	6.07350	5.24140	HepG2	ETF1
MCF2L	ENSG00000126217.16	1002.92000	1346.32920	-0.42480	3.02570	2.15440	HepG2	EWSR1
MCF2L	ENSG00000126217.16	815.85460	594.28190	0.45710	2.74520	1.48120	HepG2	FKBP4
MCF2L	ENSG00000126217.16	643.00120	997.30730	-0.63320	3.75650	2.45970	HepG2	FUS
MCF2L	ENSG00000126217.16	611.89370	810.17160	-0.40490	2.54690	1.69210	HepG2	GEMIN5
MCF2L	ENSG00000126217.16	1692.06010	955.41010	0.82450	9.91550	8.75640	HepG2	GPKOW
MCF2L	ENSG00000126217.16	1346.55550	817.63440	0.71960	14.62640	13.14890	HepG2	HNRNPF
MCF2L	ENSG00000126217.16	1667.16910	1300.88610	0.35780	2.67280	1.98560	HepG2	HNRNPK
MCF2L	ENSG00000126217.16	1277.61730	911.76730	0.48660	4.13770	3.38320	HepG2	HNRNPLL
MCF2L	ENSG00000126217.16	598.79640	1039.73650	-0.79610	10.63710	8.99450	HepG2	HNRNPM
MCF2L	ENSG00000126217.16	1181.00750	757.57440	0.64050	11.93110	10.74590	HepG2	HNRNPU
MCF2L	ENSG00000126217.16	1171.11660	805.13220	0.54050	6.43220	5.37080	HepG2	IGF2BP1
MCF2L	ENSG00000126217.16	1696.98160	1304.87890	0.37900	2.73230	2.06060	HepG2	IGF2BP2
MCF2L	ENSG00000126217.16	956.41360	773.83880	0.30550	3.57530	2.75150	HepG2	ILF2
MCF2L	ENSG00000126217.16	2179.16960	1312.73210	0.73110	6.76030	5.11750	HepG2	KHSRP
MCF2L	ENSG00000126217.16	1559.15440	1259.46480	0.30790	4.56360	3.26430	HepG2	KIF1C
MCF2L	ENSG00000126217.16	962.18310	1219.52310	-0.34190	3.04510	2.19690	HepG2	MSI2
MCF2L	ENSG00000126217.16	1457.78760	929.92850	0.64850	4.21640	3.00580	HepG2	MTPAP
MCF2L	ENSG00000126217.16	990.20560	751.08810	0.39860	2.72100	1.31770	HepG2	NIP7
MCF2L	ENSG00000126217.16	1496.56240	1090.55230	0.45650	5.66120	4.57790	HepG2	NOL12
MCF2L	ENSG00000126217.16	1123.66300	655.77160	0.77680	4.05040	2.70860	HepG2	NONO
MCF2L	ENSG00000126217.16	1560.52030	808.47080	0.94870	15.28420	13.68430	HepG2	NSUN2
MCF2L	ENSG00000126217.16	1765.09690	1310.25650	0.42980	3.77470	1.75050	HepG2	PES1
MCF2L	ENSG00000126217.16	1165.53910	675.69750	0.78640	11.86420	10.39980	HepG2	PPIL4
MCF2L	ENSG00000126217.16	1188.29230	973.40040	0.28770	2.82080	2.04160	HepG2	PRPF4
MCF2L	ENSG00000126217.16	1726.80300	1041.00200	0.73000	6.41120	5.55340	HepG2	PUF60
MCF2L	ENSG00000126217.16	2466.28910	1475.65550	0.74090	16.58280	15.23820	HepG2	QKI
MCF2L	ENSG00000126217.16	583.41460	910.67820	-0.64240	3.31190	2.54360	HepG2	RAVER1
MCF2L	ENSG00000126217.16	1037.99430	1558.09390	-0.58600	5.00490	4.36000	HepG2	RBM22
MCF2L	ENSG00000126217.16	979.79410	1516.37430	-0.63010	11.96160	10.98760	HepG2	NELFE
MCF2L	ENSG00000126217.16	637.34920	885.51170	-0.47440	4.37380	3.61860	HepG2	RPS19
MCF2L	ENSG00000126217.16	925.75630	674.65920	0.45640	6.01690	5.12210	HepG2	SAFB2
MCF2L	ENSG00000126217.16	1203.80140	1869.85330	-0.63530	5.38080	4.42160	HepG2	SF3A3
MCF2L	ENSG00000126217.16	1902.69980	998.09690	0.93070	34.05360	32.15160	HepG2	SLBP
MCF2L	ENSG00000126217.16	1707.24910	1004.14670	0.76560	5.94240	4.79150	HepG2	SNRNP70
MCF2L	ENSG00000126217.16	866.38910	1759.74510	-1.02230	14.17070	13.27100	HepG2	SRFBP1
MCF2L	ENSG00000126217.16	857.34510	1480.68680	-0.78830	18.61930	17.62020	HepG2	SRSF1
MCF2L	ENSG00000126217.16	1847.52400	1027.80180	0.84590	23.74320	22.16600	HepG2	SRSF5
MCF2L	ENSG00000126217.16	1218.57200	803.31360	0.60110	10.29150	9.09600	HepG2	SRSF7
MCF2L	ENSG00000126217.16	1457.87440	1932.55320	-0.40660	2.66360	1.40470	HepG2	SSRP1
MCF2L	ENSG00000126217.16	1792.74690	1142.64370	0.64970	3.99760	2.65400	HepG2	STIP1
MCF2L	ENSG00000126217.16	1374.48880	1168.92460	0.23360	2.31960	1.74020	HepG2	SUCLG1
MCF2L	ENSG00000126217.16	1008.90510	1330.91000	-0.39960	4.64790	3.95060	HepG2	TAF15
MCF2L	ENSG00000126217.16	1572.83400	888.74460	0.82340	12.16150	10.80610	HepG2	TARDBP
MCF2L	ENSG00000126217.16	1143.39950	742.70320	0.62240	11.11230	10.09400	HepG2	TRIM56
MCF2L	ENSG00000126217.16	1451.76830	1016.96580	0.51340	5.92360	4.58010	HepG2	TUFM
MCF2L	ENSG00000126217.16	864.55150	1289.19400	-0.57640	6.00750	5.09820	HepG2	U2AF1
MCF2L	ENSG00000126217.16	486.70950	1455.78730	-1.58070	6.85040	5.22920	HepG2	U2AF2
MCF2L	ENSG00000126217.16	1783.47600	1076.41000	0.72840	5.12310	3.96450	HepG2	UBE2L3
MCF2L	ENSG00000126217.16	559.86770	419.83900	0.41510	2.24250	1.55890	HepG2	UCHL5
MCF2L	ENSG00000126217.16	2214.16090	1658.27780	0.41700	8.07880	6.98900	HepG2	UPF1
MCF2L	ENSG00000126217.16	2175.42500	1704.44910	0.35190	5.12110	3.73800	HepG2	UTP18
MCF2L	ENSG00000126217.16	737.58180	1600.99620	-1.11810	36.55250	34.74630	HepG2	UTP3
MCF2L	ENSG00000126217.16	666.92080	1001.79720	-0.58700	3.73120	2.49650	HepG2	XRCC6
MCF2L	ENSG00000126217.16	1339.94720	1823.78270	-0.44480	9.66320	8.79750	HepG2	ZNF622
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MCF2L is not available on ENCORE database.

6 RBPs can affect the splicing of MCF2L :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MCF2L	ENSG00000126217.16	chr13	+	113556253	113556417	113548691	113548745	113556512	113556685	0.20800	0.00336	0.05551	included	HepG2	U2AF1
SE	MCF2L	ENSG00000126217.16	chr13	+	113741092	113741276	113740437	113740563	113741548	113741770	0.09500	0.00014	0.00522	included	HepG2	HNRNPK
SE	MCF2L	ENSG00000126217.16	chr13	+	113745434	113745509	113743949	113744042	113748827	113748949	0.17500	0.00000	0.00052	included	HepG2	PTBP1
SE	MCF2L	ENSG00000126217.16	chr13	+	113745434	113745509	113743949	113744042	113748827	113748949	-0.10900	0.00041	0.03126	excluded	HepG2	FTO
SE	MCF2L	ENSG00000126217.16	chr13	+	113745434	113745509	113743949	113744042	113748827	113748949	0.16000	0.00018	0.02805	included	HepG2	PCBP2
SE	MCF2L	ENSG00000126217.16	chr13	+	113745434	113745509	113743949	113744042	113748827	113748949	0.16600	0.00005	0.01775	included	HepG2	FUBP3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MCF2L

General Information

Functions

Localization

Domains (AlphaFold: MCF2L)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MCF2L is not avaliable on ENCORE database.

45 proteins are bound to MCF2L RNA:

eCLIP assay for MCF2L is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MCF2L is not available on ENCORE database.

70 RBPs can affect the gene expression of MCF2L :

The Knockdown/knockout RNA-Seq assay for MCF2L is not available on ENCORE database.

6 RBPs can affect the splicing of MCF2L :

The Knockdown/knockout RNA-Seq assay for MCF2L is not avaliable on ENCORE database.